FFCP PHASE1:Mm9::chr7:149088238..149088255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54473 | |EntrezGene=54473 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A6PWS1,Q9QZ06 | |UniProt=A6PWS1,Q9QZ06 | ||
|association_with_transcript=55bp_to_NM_023764,uc009kmd.1_5end | |association_with_transcript=55bp_to_NM_023764,uc009kmd.1_5end | ||
|cluster_id=chr7:149088238..149088255,- | |||
|description=CAGE_peak_2_at_Tollip_5end | |description=CAGE_peak_2_at_Tollip_5end | ||
|id=chr7:149088238..149088255,- | |id=chr7:149088238..149088255,- | ||
|ontology_enrichment_celltype=CL:0000221!2.03e-08!44;CL:0000133!2.03e-08!44;CL:0002319!2.78e-08!43;CL:0000540!2.48e-07!33;CL:0000047!2.48e-07!33;CL:0000031!2.48e-07!33;CL:0000404!2.48e-07!33 | |ontology_enrichment_celltype=CL:0000221!2.03e-08!44;CL:0000133!2.03e-08!44;CL:0002319!2.78e-08!43;CL:0000540!2.48e-07!33;CL:0000047!2.48e-07!33;CL:0000031!2.48e-07!33;CL:0000404!2.48e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.47e-09,44;CL:0000133,9.47e-09,44;CL:0002319,1.30e-08,43;CL:0000540,1.20e-07,33;CL:0000047,1.20e-07,33;CL:0000031,1.20e-07,33;CL:0000404,1.20e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.82e-14!75;UBERON:0001016!7.82e-14!75;UBERON:0001017!1.16e-13!73;UBERON:0005743!1.16e-13!73;UBERON:0007811!1.44e-12!86;UBERON:0000153!4.18e-11!94;UBERON:0001049!1.17e-10!52;UBERON:0005068!1.17e-10!52;UBERON:0006241!1.17e-10!52;UBERON:0007135!1.17e-10!52;UBERON:0002020!4.93e-09!34;UBERON:0004121!5.50e-09!102;UBERON:0000924!5.50e-09!102;UBERON:0006601!5.50e-09!102;UBERON:0002346!1.35e-08!71;UBERON:0003075!1.35e-08!71;UBERON:0007284!1.35e-08!71;UBERON:0002780!1.83e-08!39;UBERON:0001890!1.83e-08!39;UBERON:0006240!1.83e-08!39;UBERON:0003080!3.40e-08!40;UBERON:0000955!4.74e-08!50;UBERON:0006238!4.74e-08!50;UBERON:0002616!5.89e-08!49;UBERON:0003056!1.27e-07!49;UBERON:0000033!2.61e-07!63;UBERON:0002791!6.93e-07!29;UBERON:0003528!6.93e-07!29;UBERON:0001893!6.93e-07!29;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!7.82e-14!75;UBERON:0001016!7.82e-14!75;UBERON:0001017!1.16e-13!73;UBERON:0005743!1.16e-13!73;UBERON:0007811!1.44e-12!86;UBERON:0000153!4.18e-11!94;UBERON:0001049!1.17e-10!52;UBERON:0005068!1.17e-10!52;UBERON:0006241!1.17e-10!52;UBERON:0007135!1.17e-10!52;UBERON:0002020!4.93e-09!34;UBERON:0004121!5.50e-09!102;UBERON:0000924!5.50e-09!102;UBERON:0006601!5.50e-09!102;UBERON:0002346!1.35e-08!71;UBERON:0003075!1.35e-08!71;UBERON:0007284!1.35e-08!71;UBERON:0002780!1.83e-08!39;UBERON:0001890!1.83e-08!39;UBERON:0006240!1.83e-08!39;UBERON:0003080!3.40e-08!40;UBERON:0000955!4.74e-08!50;UBERON:0006238!4.74e-08!50;UBERON:0002616!5.89e-08!49;UBERON:0003056!1.27e-07!49;UBERON:0000033!2.61e-07!63;UBERON:0002791!6.93e-07!29;UBERON:0003528!6.93e-07!29;UBERON:0001893!6.93e-07!29;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.57e-14,75;UBERON:0001017,5.34e-14,73;UBERON:0004121,2.62e-11,95;UBERON:0000924,2.62e-11,95;UBERON:0006601,2.62e-11,95;UBERON:0002346,2.75e-11,64;UBERON:0003075,2.75e-11,64;UBERON:0007284,2.75e-11,64;UBERON:0001049,9.54e-11,52;UBERON:0005068,9.54e-11,52;UBERON:0006241,9.54e-11,52;UBERON:0007135,9.54e-11,52;UBERON:0000073,3.02e-10,54;UBERON:0002020,5.20e-09,34;UBERON:0010371,6.27e-09,73;UBERON:0000955,1.01e-08,47;UBERON:0006238,1.01e-08,47;UBERON:0002616,1.25e-08,46;UBERON:0002780,1.90e-08,39;UBERON:0001890,1.90e-08,39;UBERON:0006240,1.90e-08,39;UBERON:0003080,3.55e-08,40;UBERON:0003056,1.01e-07,49;UBERON:0000956,5.51e-07,21;UBERON:0001869,5.51e-07,21;UBERON:0000203,5.51e-07,21;UBERON:0003528,7.89e-07,29;UBERON:0002791,7.89e-07,29;UBERON:0001893,7.89e-07,29 | |||
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|phase1_expression=2.08193501236232,2.79180326111489,2.27499619694768,2.72217790176147,3.00537437967808,0.839396359559449,0.233612640595526,3.22808308603941,5.06839399746,8.19225842126977,0.34243593645101,0.478632953972018,1.88320802924326,1.83582845079895,0,0.404950534779652,0.699561878128147,1.41957974411207,1.64537320326887,0.42438965179803,3.74190476664707,3.27660138962921,3.91799683708403,1.27993938234725,1.14704640533585,0,1.29228598847722,1.07735616342945,0.380046838912748,0.252030129759931,0.665191531965914,3.17515336729816,1.84519436275371,0,0,0.831173226792462,0,2.51118978442145,2.3440060335714,0.523523743973798,5.29408339227913,2.04913645487534,0.971020706062307,0.881277725829041,0.608261587317087,0.550640256485045,1.56478268869608,4.14247797122848,2.41654801007919,1.94429899074283,2.79972843250725,2.87505128729943,3.85899993932794,4.35217285206807,8.06625117941913,3.08711323243136,1.71920063963254,1.03134418455488,2.83243045203437,5.28990979272033,1.26766280701236,1.0165335962074,2.66788438833342,1.3498495759221,0,0.7104801149461,1.79760066311043,2.68952813725088,4.56234294157302,4.72520784160917,4.41682418837902,3.99911378165325,4.8591079009355,2.32732518508413,4.31304619582064,3.67687514644008,0,3.06449611404451,1.53606533256243,3.82470234417562,3.11057988248193,2.08365348222704,3.07101298901519,1.12552522006336,1.68078072554491,5.30331453852602,4.6982654663704,5.40558392893372,2.12033341332915,2.19157524309678,2.02905142091174,0,8.15965600449301,0.539703191637817,0,0.896053774194671,0.842666520790511,1.36344258062446,0.519572009205738,0.35333957451034,2.53518155598025,2.56652954828636,0,7.11066703153331,1.5154372870785,0.506719730950197,1.51657333504435,1.7127581957859,1.29468941823586,0.890652834388949,1.04091196059682,0.304465478312141,1.15307748628029,0.904335843315735,2.23418543557839,0.628332956648377,3.70792451601561,0.433798070759735,0,1.61766849947409,1.32504911076236,1.45462575940567,0,4.09893115816166,6.28340120440365,0,7.30872259486114,2.99951365496704,4.82866862877646,1.3481157546434,0.915001205637253,4.02093926761166,3.82413504423008,3.58001640262463,2.70124457927428,2.59586020908412,1.62942982160506,1.49288364732112,1.51633655060205,0.210441855886474,1.69156575851515,1.83921683546778,3.24111833649629,2.10986744970001,3.26575195926374,1.7935920839879,2.24884138943349,1.03481348295606,2.58681591519411,1.13463648100692,2.11141348996739,1.53437012699302,0.834141747676794,1.0447564995665,0.823128545631774,1.59227413454795,3.51106593656617,5.91900186363845,7.672414483681,2.48550927042602,1.87620847984877,1.2604344302271,2.13070262026689,0.983821158737019,2.00547246753592,1.86027155800326,1.60964040839772,1.40118410840603,0.493679549740441,0.492502392237286,0.810688095458557,1.60819986167866,0.878200461164203,1.20785776884335,1.68231958851302,6.27718135513635,0.330418782983798,0.793351699990633,2.77274725695804,2.55460339046482,1.67527699718721,1.4117846723634,0.22237804384487,1.14135375667535,0.474529061544512,1.97638745668813,0.754005626400808,1.1937388322469,0.779856348476481,0.898819408654221,0.648414149624083,0.398282546508734,3.22435431620239,2.74196430263349,6.76246414038483,1.4255592949172,1.16371492300575,2.10407459670956,1.70738650235495,1.32849133181642,0.784993639206874,1.48076596706161,0.889357881261447,1.33476084572875,1.76903095601883,1.34917267430912,0.405720242777006,1.20588579876208,1.01850340712568,0.575392274901621,1.94562272130042,0.823684239564244,1.43768206527355,0,0.936113019343682,0.505157755894224,0.896987067609561,1.4473305640901,0.739012760666419,2.84237117655727,3.25929952884052,2.71592137240301,2.11221223459652,2.1775813467436,2.14239276797412,3.12213836572478,5.35959489961049,4.20782910332672,4.30527875375215,1.96635977658886,1.20879487306127,2.60368305446721,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,1.99259867206745,1.47541450839008,1.51482556322624,3.78609863299508,3.12350995437311,3.87762115919038,1.91175038362042,4.01037613348309,2.83076530788832,3.23848561339915,2.33804686329049,4.74345333535828,2.24924921495265,1.27746076687442,0.712262414669021,1.30309567482861,0.494910368917606,0,2.18502572539483,1.51161778482376,1.69744571780308,2.65771703592696,1.22974059177571,2.32585463851399,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.70219802876894,2.52085531643834,2.32845630808958,2.7863814554107,2.6601035046341,2.49716344642899,2.96188237083818,5.48036908406279,2.81606049676452,2.75381692122966,0.661585194164886,0.8244312647074,2.74489525383039,1.74907482291652,0.716234064018819,0.164140899745061,0.582961673259701,1.8542530201051,0.683483523191411,1.65109494370578,1.85194527369712,0.565105371014073,1.0935538217682,0.228778173206523,8.15896463970505,8.25713568709582,5.52799895217695,0,2.84702394223022,1.01659733563424,0.756037385752609,2.71814784818809,1.74690050996942,0.674321731924103,1.32245529160537,0,0.648074866458964,1.86401793926078,18.0381740378941,2.54178128274764,0.165458490457098,0.97225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| ||
|short_description=p2@Tollip | |short_description=p2@Tollip | ||
}} | }} |
Latest revision as of 04:40, 26 September 2015
Short description: | p2@Tollip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tollip_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_NM_023764, uc009kmd.1_5end |
EntrezGene: | Tollip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.47e-09 | 44 |
neurectodermal cell | 9.47e-09 | 44 |
neural cell | 1.30e-08 | 43 |
neuron | 1.20e-07 | 33 |
neuronal stem cell | 1.20e-07 | 33 |
neuroblast | 1.20e-07 | 33 |
electrically signaling cell | 1.20e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.57e-14 | 75 |
central nervous system | 5.34e-14 | 73 |
ectoderm-derived structure | 2.62e-11 | 95 |
ectoderm | 2.62e-11 | 95 |
presumptive ectoderm | 2.62e-11 | 95 |
neurectoderm | 2.75e-11 | 64 |
neural plate | 2.75e-11 | 64 |
presumptive neural plate | 2.75e-11 | 64 |
neural tube | 9.54e-11 | 52 |
neural rod | 9.54e-11 | 52 |
future spinal cord | 9.54e-11 | 52 |
neural keel | 9.54e-11 | 52 |
regional part of nervous system | 3.02e-10 | 54 |
gray matter | 5.20e-09 | 34 |
ecto-epithelium | 6.27e-09 | 73 |
brain | 1.01e-08 | 47 |
future brain | 1.01e-08 | 47 |
regional part of brain | 1.25e-08 | 46 |
regional part of forebrain | 1.90e-08 | 39 |
forebrain | 1.90e-08 | 39 |
future forebrain | 1.90e-08 | 39 |
anterior neural tube | 3.55e-08 | 40 |
pre-chordal neural plate | 1.01e-07 | 49 |
cerebral cortex | 5.51e-07 | 21 |
cerebral hemisphere | 5.51e-07 | 21 |
pallium | 5.51e-07 | 21 |
brain grey matter | 7.89e-07 | 29 |
regional part of telencephalon | 7.89e-07 | 29 |
telencephalon | 7.89e-07 | 29 |