FFCP PHASE1:Hg19::chr11:1781977..1781989,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=399bp_to_ENST00000449248_5end | |association_with_transcript=399bp_to_ENST00000449248_5end | ||
|cluster_id=chr11:1781977..1781989,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ENST00000449248_5end | |description=CAGE_peak_1_at_ENST00000449248_5end | ||
|id=chr11:1781977..1781989,+ | |id=chr11:1781977..1781989,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.97e-120!42;CL:0000860!4.29e-111!45;CL:0000766!1.60e-104!76;CL:0000839!9.60e-87!70;CL:0000557!2.15e-85!71;CL:0002194!3.46e-79!63;CL:0000576!3.46e-79!63;CL:0000040!3.46e-79!63;CL:0000559!3.46e-79!63;CL:0002009!1.74e-76!65;CL:0000763!1.15e-67!112;CL:0000049!1.15e-67!112;CL:0000738!9.34e-57!140;CL:0002031!4.95e-47!124;CL:0002032!1.74e-44!165;CL:0000837!1.74e-44!165;CL:0000037!3.79e-44!172;CL:0000566!3.79e-44!172;CL:0002087!6.49e-42!119;CL:0000988!4.13e-41!182;CL:0002393!1.12e-17!9;CL:0002397!1.12e-17!9;CL:0000134!3.70e-17!358;CL:0002320!1.32e-16!365;CL:0000094!2.78e-15!8;CL:0000219!1.18e-14!390;CL:0000034!2.33e-12!444;CL:0000048!2.56e-12!430;CL:0000723!5.51e-12!436;CL:0002274!1.24e-11!5;CL:0000457!1.24e-11!5;CL:0002191!1.24e-11!5;CL:0000097!1.24e-11!5;CL:0000831!1.24e-11!5;CL:0002028!1.24e-11!5;CL:0000081!6.28e-11!11;CL:0000767!9.73e-11!3;CL:0000771!1.29e-08!2 | |ontology_enrichment_celltype=CL:0002057!9.97e-120!42;CL:0000860!4.29e-111!45;CL:0000766!1.60e-104!76;CL:0000839!9.60e-87!70;CL:0000557!2.15e-85!71;CL:0002194!3.46e-79!63;CL:0000576!3.46e-79!63;CL:0000040!3.46e-79!63;CL:0000559!3.46e-79!63;CL:0002009!1.74e-76!65;CL:0000763!1.15e-67!112;CL:0000049!1.15e-67!112;CL:0000738!9.34e-57!140;CL:0002031!4.95e-47!124;CL:0002032!1.74e-44!165;CL:0000837!1.74e-44!165;CL:0000037!3.79e-44!172;CL:0000566!3.79e-44!172;CL:0002087!6.49e-42!119;CL:0000988!4.13e-41!182;CL:0002393!1.12e-17!9;CL:0002397!1.12e-17!9;CL:0000134!3.70e-17!358;CL:0002320!1.32e-16!365;CL:0000094!2.78e-15!8;CL:0000219!1.18e-14!390;CL:0000034!2.33e-12!444;CL:0000048!2.56e-12!430;CL:0000723!5.51e-12!436;CL:0002274!1.24e-11!5;CL:0000457!1.24e-11!5;CL:0002191!1.24e-11!5;CL:0000097!1.24e-11!5;CL:0000831!1.24e-11!5;CL:0002028!1.24e-11!5;CL:0000081!6.28e-11!11;CL:0000767!9.73e-11!3;CL:0000771!1.29e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-94;33!CL:0002057;2.06e-94;33!CL:0000473;2.55e-63;39!CL:0000234;2.55e-63;39!CL:0000576;6.12e-55;48!CL:0000766;3.35e-40;69!CL:0000763;6.79e-22;100!CL:0002393;1.26e-14;6!CL:0002397;1.26e-14;6!CL:0002087;2.43e-14;104!CL:0000771;1.05e-12;2!CL:0000738;3.57e-11;136!CL:0000097;7.12e-11;5!CL:0000094;6.17e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.09e-106,42;CL:0002057,2.09e-106,42;CL:0000473,2.08e-92,48;CL:0000234,2.08e-92,48;CL:0000766,4.22e-88,72;CL:0000839,9.77e-80,66;CL:0000557,1.77e-78,67;CL:0002194,8.36e-73,59;CL:0000576,8.36e-73,59;CL:0000040,8.36e-73,59;CL:0000559,8.36e-73,59;CL:0002009,2.84e-70,61;CL:0000763,5.04e-57,108;CL:0000049,5.04e-57,108;CL:0000738,3.98e-44,136;CL:0002031,1.67e-41,120;CL:0002032,2.27e-36,161;CL:0000837,2.27e-36,161;CL:0002087,6.73e-35,115;CL:0000037,1.31e-34,168;CL:0000988,1.52e-32,177;CL:0000134,3.73e-13,354;CL:0002320,8.95e-13,361;CL:0000771,9.95e-13,2;CL:0000219,1.96e-11,386;CL:0000097,8.57e-11,5;CL:0002028,8.57e-11,5;CL:0000034,3.77e-10,441;CL:0000048,8.57e-10,427;CL:0002393,1.11e-09,9;CL:0002397,1.11e-09,9;CL:0000723,1.44e-09,433;CL:0000094,6.30e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-79;42!CL:0000049;1.36e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.81e-75!80;UBERON:0001474!7.46e-69!86;UBERON:0002390!4.29e-62!102;UBERON:0003061!4.29e-62!102;UBERON:0004765!3.55e-57!101;UBERON:0001434!3.55e-57!101;UBERON:0002193!1.21e-55!112;UBERON:0002405!2.02e-51!115;UBERON:0002204!1.44e-30!167;UBERON:0003081!8.48e-24!216;UBERON:0002384!7.53e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.28e-68,76;UBERON:0001474,3.12e-63,82;UBERON:0004765,3.74e-57,90;UBERON:0002405,3.86e-55,93;UBERON:0002390,4.70e-52,98;UBERON:0003061,4.70e-52,98;UBERON:0001434,6.61e-51,100;UBERON:0002193,9.87e-47,108;UBERON:0002204,3.36e-28,167;UBERON:0003081,3.83e-22,203;UBERON:0002384,2.95e-12,371;UBERON:0000926,4.35e-12,315;UBERON:0004120,4.35e-12,315;UBERON:0006603,4.35e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0,0,1.66198622559563,1.80490002723128,0.651032612147555,0,0,0,2.03557534291391,1.88937971844405,0.727752183563449,5.11343881192506,4.52284676824008,5.57471467611186,3.74000110018796,3.33008918487831,1.89185783910868,7.23965929546899,9.03678557017357,9.47985406160392,2.25890807451126,1.91034305040492,1.79778787556068,2.44867113896722,1.60464513538047,1.91801137739712,0.989553900560148,1.99463657621632,0.426224750532694,2.32167390902867,2.26954089876456,0.622822248995575,1.7587406567972,4.69334626578181,5.64690996233303,1.21079900526674,1.47311054395026,0.316462387440884,1.05627643155971,1.06302149982522,0.838634582033504,0.336985893439485,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,6.84182781284548,1.29707958075265,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0,0,1.66198622559563,1.80490002723128,0.651032612147555,0,0,0,2.03557534291391,1.88937971844405,0.727752183563449,5.11343881192506,4.52284676824008,5.57471467611186,3.74000110018796,3.33008918487831,1.89185783910868,7.23965929546899,9.03678557017357,9.47985406160392,2.25890807451126,1.91034305040492,1.79778787556068,2.44867113896722,1.60464513538047,1.91801137739712,0.989553900560148,1.99463657621632,0.426224750532694,2.32167390902867,2.26954089876456,0.622822248995575,1.7587406567972,4.69334626578181,5.64690996233303,1.21079900526674,1.47311054395026,0.316462387440884,1.05627643155971,1.06302149982522,0.838634582033504,0.336985893439485,0,0.16072558669708,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,6.84182781284548,1.29707958075265,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000449248 | |short_description=p1@ENST00000449248 | ||
}} | }} |
Latest revision as of 20:33, 23 July 2015
Short description: | p1@ENST00000449248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000449248_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 399bp_to_ENST00000449248_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.28e-68 | 76 |
bone element | 3.12e-63 | 82 |
skeletal element | 3.74e-57 | 90 |
immune system | 3.86e-55 | 93 |
hematopoietic system | 4.70e-52 | 98 |
blood island | 4.70e-52 | 98 |
skeletal system | 6.61e-51 | 100 |
hemolymphoid system | 9.87e-47 | 108 |
musculoskeletal system | 3.36e-28 | 167 |
lateral plate mesoderm | 3.83e-22 | 203 |
connective tissue | 2.95e-12 | 371 |
mesoderm | 4.35e-12 | 315 |
mesoderm-derived structure | 4.35e-12 | 315 |
presumptive mesoderm | 4.35e-12 | 315 |