FFCP PHASE1:Hg19::chr11:46299443..46299459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90993 | |EntrezGene=90993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18856 | |HGNC=18856 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BA8 | |UniProt=Q96BA8 | ||
|association_with_transcript=215bp_to_ENST00000288400,ENST00000446415,NM_052854,uc001ncf.2_5end | |association_with_transcript=215bp_to_ENST00000288400,ENST00000446415,NM_052854,uc001ncf.2_5end | ||
|cluster_id=chr11:46299443..46299459,+ | |||
|coexpression_cluster_id=C2133 | |||
|description=CAGE_peak_4_at_CREB3L1_5end | |description=CAGE_peak_4_at_CREB3L1_5end | ||
|id=chr11:46299443..46299459,+ | |id=chr11:46299443..46299459,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.31e-48!180;CL:0000057!1.03e-25!75;CL:0000183!2.97e-24!59;CL:0000680!1.26e-23!57;CL:0000056!1.26e-23!57;CL:0000355!1.26e-23!57;CL:0000187!1.61e-23!54;CL:0000393!5.57e-21!60;CL:0000211!5.57e-21!60;CL:0000192!7.49e-21!42;CL:0000514!7.49e-21!42;CL:0000359!4.91e-16!32;CL:0000222!2.03e-12!119;CL:0000048!2.97e-11!430;CL:0000144!1.45e-10!625;CL:0000723!1.70e-10!436;CL:0000034!6.68e-10!444;CL:0002371!6.82e-10!591;CL:0002620!1.24e-08!23 | |ontology_enrichment_celltype=CL:0000055!4.31e-48!180;CL:0000057!1.03e-25!75;CL:0000183!2.97e-24!59;CL:0000680!1.26e-23!57;CL:0000056!1.26e-23!57;CL:0000355!1.26e-23!57;CL:0000187!1.61e-23!54;CL:0000393!5.57e-21!60;CL:0000211!5.57e-21!60;CL:0000192!7.49e-21!42;CL:0000514!7.49e-21!42;CL:0000359!4.91e-16!32;CL:0000222!2.03e-12!119;CL:0000048!2.97e-11!430;CL:0000144!1.45e-10!625;CL:0000723!1.70e-10!436;CL:0000034!6.68e-10!444;CL:0002371!6.82e-10!591;CL:0002620!1.24e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000192;4.84e-18;43!CL:0000359;4.08e-16;32!CL:0000187;9.41e-15;55!CL:0000134;1.69e-11;55!CL:0000057;4.83e-11;73!CL:0000393;5.26e-11;61!CL:0000211;5.26e-11;61!CL:0000723;1.78e-10;61!CL:0002320;5.67e-10;188!CL:0000048;6.73e-10;58!CL:0002539;2.10e-08;10!CL:0002620;3.32e-08;23!CL:0000034;4.74e-08;69!CL:0002334;2.38e-07;12!CL:0002570;8.50e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.56e-27,55;CL:0000057,2.21e-27,76;CL:0000048,3.86e-26,427;CL:0000192,2.11e-25,43;CL:0000514,2.11e-25,43;CL:0000680,3.33e-25,58;CL:0000056,3.33e-25,58;CL:0000355,3.33e-25,58;CL:0000723,4.80e-25,433;CL:0000034,1.23e-23,441;CL:0000393,4.03e-23,61;CL:0000211,4.03e-23,61;CL:0000359,1.48e-17,32;CL:0002320,1.12e-12,361;CL:0000222,3.16e-11,121;CL:0000134,4.42e-10,354;CL:0002539,1.19e-08,10;CL:0002620,1.51e-08,23;CL:0000219,3.52e-08,386;CL:0002334,2.69e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.84e-18;43!CL:0000355;1.37e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.53e-26!83;UBERON:0002329!1.53e-26!83;UBERON:0003077!1.53e-26!83;UBERON:0003059!1.53e-26!83;UBERON:0007282!1.53e-26!83;UBERON:0009618!1.53e-26!83;UBERON:0007285!1.53e-26!83;UBERON:0004290!2.02e-24!70;UBERON:0002385!5.75e-22!63;UBERON:0001015!5.75e-22!63;UBERON:0000383!5.75e-22!63;UBERON:0001134!6.27e-22!61;UBERON:0002036!6.27e-22!61;UBERON:0003082!6.27e-22!61;UBERON:0000486!6.00e-21!82;UBERON:0005256!2.40e-17!143;UBERON:0004872!6.77e-13!84;UBERON:0001637!1.71e-12!42;UBERON:0003509!1.71e-12!42;UBERON:0004572!1.71e-12!42;UBERON:0004573!1.73e-11!33;UBERON:0004571!1.73e-11!33;UBERON:0002049!3.59e-11!79;UBERON:0007798!3.59e-11!79;UBERON:0002100!8.26e-11!216;UBERON:0000490!4.64e-10!138;UBERON:0001981!7.23e-10!60;UBERON:0007500!7.23e-10!60;UBERON:0004537!7.23e-10!60;UBERON:0006965!7.23e-10!60;UBERON:0000475!3.13e-09!365;UBERON:0004535!1.75e-08!110;UBERON:0001009!2.46e-08!113;UBERON:0001135!3.25e-08!15;UBERON:0000055!3.56e-08!69;UBERON:0003102!3.63e-08!95;UBERON:0003104!1.23e-07!238;UBERON:0009142!1.23e-07!238;UBERON:0003914!3.54e-07!118;UBERON:0000481!6.98e-07!347 | |ontology_enrichment_uberon=UBERON:0000914!1.53e-26!83;UBERON:0002329!1.53e-26!83;UBERON:0003077!1.53e-26!83;UBERON:0003059!1.53e-26!83;UBERON:0007282!1.53e-26!83;UBERON:0009618!1.53e-26!83;UBERON:0007285!1.53e-26!83;UBERON:0004290!2.02e-24!70;UBERON:0002385!5.75e-22!63;UBERON:0001015!5.75e-22!63;UBERON:0000383!5.75e-22!63;UBERON:0001134!6.27e-22!61;UBERON:0002036!6.27e-22!61;UBERON:0003082!6.27e-22!61;UBERON:0000486!6.00e-21!82;UBERON:0005256!2.40e-17!143;UBERON:0004872!6.77e-13!84;UBERON:0001637!1.71e-12!42;UBERON:0003509!1.71e-12!42;UBERON:0004572!1.71e-12!42;UBERON:0004573!1.73e-11!33;UBERON:0004571!1.73e-11!33;UBERON:0002049!3.59e-11!79;UBERON:0007798!3.59e-11!79;UBERON:0002100!8.26e-11!216;UBERON:0000490!4.64e-10!138;UBERON:0001981!7.23e-10!60;UBERON:0007500!7.23e-10!60;UBERON:0004537!7.23e-10!60;UBERON:0006965!7.23e-10!60;UBERON:0000475!3.13e-09!365;UBERON:0004535!1.75e-08!110;UBERON:0001009!2.46e-08!113;UBERON:0001135!3.25e-08!15;UBERON:0000055!3.56e-08!69;UBERON:0003102!3.63e-08!95;UBERON:0003104!1.23e-07!238;UBERON:0009142!1.23e-07!238;UBERON:0003914!3.54e-07!118;UBERON:0000481!6.98e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.79e-10;33!UBERON:0004571;2.79e-10;33!UBERON:0002384;6.42e-10;198!UBERON:0001135;9.13e-09;15!UBERON:0004237;2.10e-08;10!UBERON:0004695;2.10e-08;10!UBERON:0002111;2.10e-08;10!UBERON:0004178;2.10e-08;10!UBERON:0001637;3.70e-08;42!UBERON:0003509;3.70e-08;42!UBERON:0004572;3.70e-08;42!UBERON:0001013;7.02e-08;14!UBERON:0002385;9.15e-08;31!UBERON:0001015;9.15e-08;31!UBERON:0000383;9.15e-08;31!UBERON:0002204;1.44e-07;70!UBERON:0003104;3.39e-07;7!UBERON:0009142;3.39e-07;7 | |||
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| ||
|short_description=p4@CREB3L1 | |short_description=p4@CREB3L1 | ||
}} | }} |
Latest revision as of 02:08, 18 September 2015
Short description: | p4@CREB3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CREB3L1_5end |
Coexpression cluster: | C2133_Mesenchymal_Fibroblast_Smooth_osteoclastoma_Osteoblast_Prostate_leiomyoma |
Association with transcript: | 215bp_to_ENST00000288400, ENST00000446415, NM_052854, uc001ncf.2_5end |
EntrezGene: | CREB3L1 |
HGNC: | 18856 |
UniProt: | Q96BA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.56e-27 | 55 |
fibroblast | 2.21e-27 | 76 |
multi fate stem cell | 3.86e-26 | 427 |
smooth muscle cell | 2.11e-25 | 43 |
smooth muscle myoblast | 2.11e-25 | 43 |
muscle precursor cell | 3.33e-25 | 58 |
myoblast | 3.33e-25 | 58 |
multi-potent skeletal muscle stem cell | 3.33e-25 | 58 |
somatic stem cell | 4.80e-25 | 433 |
stem cell | 1.23e-23 | 441 |
electrically responsive cell | 4.03e-23 | 61 |
electrically active cell | 4.03e-23 | 61 |
vascular associated smooth muscle cell | 1.48e-17 | 32 |
connective tissue cell | 1.12e-12 | 361 |
mesodermal cell | 3.16e-11 | 121 |
mesenchymal cell | 4.42e-10 | 354 |
aortic smooth muscle cell | 1.19e-08 | 10 |
skin fibroblast | 1.51e-08 | 23 |
motile cell | 3.52e-08 | 386 |
preadipocyte | 2.69e-07 | 12 |