FFCP PHASE1:Hg19::chr10:16859361..16859436,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:16859361..16859436,-
|short_description=p1@RSU1
|description=CAGE_peak_1_at_RSU1_5end
|association_with_transcript=0bp_to_ENST00000377921,ENST00000464074,...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6251 | |EntrezGene=6251 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10464 | |HGNC=10464 | ||
|UniProt=Q15404, | |TSSclassifier=strong | ||
|UniProt=Q15404,F2Z2H2 | |||
|association_with_transcript=0bp_to_ENST00000377921,ENST00000464074,uc001iok.2_5end | |||
|cluster_id=chr10:16859361..16859436,- | |||
|description=CAGE_peak_1_at_RSU1_5end | |||
|id=chr10:16859361..16859436,- | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-31!180;CL:0002371!4.00e-28!591;CL:0000144!3.49e-25!625;CL:0000048!2.93e-20!430;CL:0000723!6.55e-20!436;CL:0000057!1.13e-19!75;CL:0000034!1.68e-18!444;CL:0000222!4.79e-15!119;CL:0000680!2.23e-14!57;CL:0000056!2.23e-14!57;CL:0000355!2.23e-14!57;CL:0000003!2.92e-14!722;CL:0000548!1.16e-13!679;CL:0000004!1.16e-13!679;CL:0000255!1.16e-13!679;CL:0000012!2.04e-13!682;CL:0000187!2.16e-13!54;CL:0000183!3.09e-13!59;CL:0000192!8.86e-13!42;CL:0000514!8.86e-13!42;CL:0000393!2.14e-11!60;CL:0000211!2.14e-11!60;CL:0000359!5.63e-11!32;CL:0002620!3.02e-10!23;CL:0000220!1.16e-09!246;CL:0002321!2.39e-09!248;CL:0002320!3.97e-08!365;CL:0000134!4.31e-08!358;CL:0000219!9.89e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.39e-10;32!CL:0002620;2.97e-10;23!CL:0000192;2.61e-09;43!CL:0000057;1.82e-08;73!CL:0000187;9.42e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.30e-21,427;CL:0000723,5.31e-21,433;CL:0000057,4.94e-20,76;CL:0000034,1.52e-19,441;CL:0000222,2.27e-15,121;CL:0000680,1.70e-14,58;CL:0000056,1.70e-14,58;CL:0000355,1.70e-14,58;CL:0000187,1.64e-13,55;CL:0000192,7.02e-13,43;CL:0000514,7.02e-13,43;CL:0000393,1.59e-11,61;CL:0000211,1.59e-11,61;CL:0000359,5.63e-11,32;CL:0002620,3.02e-10,23;CL:0002321,1.31e-09,250;CL:0002320,1.06e-08,361;CL:0000134,1.14e-08,354;CL:0000219,3.11e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;2.61e-09;43!CL:0000355;8.74e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.00e-23!110;UBERON:0001009!1.48e-21!113;UBERON:0002049!2.40e-17!79;UBERON:0007798!2.40e-17!79;UBERON:0000914!3.36e-17!83;UBERON:0002329!3.36e-17!83;UBERON:0003077!3.36e-17!83;UBERON:0003059!3.36e-17!83;UBERON:0007282!3.36e-17!83;UBERON:0009618!3.36e-17!83;UBERON:0007285!3.36e-17!83;UBERON:0004290!2.70e-15!70;UBERON:0004872!2.86e-15!84;UBERON:0000486!1.30e-14!82;UBERON:0000055!2.14e-14!69;UBERON:0001981!2.48e-13!60;UBERON:0007500!2.48e-13!60;UBERON:0004537!2.48e-13!60;UBERON:0006965!2.48e-13!60;UBERON:0001637!7.52e-13!42;UBERON:0003509!7.52e-13!42;UBERON:0004572!7.52e-13!42;UBERON:0001134!9.58e-13!61;UBERON:0002036!9.58e-13!61;UBERON:0003082!9.58e-13!61;UBERON:0002385!1.54e-12!63;UBERON:0001015!1.54e-12!63;UBERON:0000383!1.54e-12!63;UBERON:0002199!1.83e-11!45;UBERON:0002416!1.83e-11!45;UBERON:0003102!1.24e-10!95;UBERON:0005256!1.57e-10!143;UBERON:0004573!4.09e-10!33;UBERON:0004571!4.09e-10!33;UBERON:0003914!1.43e-09!118;UBERON:0002097!3.63e-09!40;UBERON:0000490!7.42e-09!138;UBERON:0002384!1.09e-07!375;UBERON:0002100!2.08e-07!216;UBERON:0000947!6.55e-07!21;UBERON:0010191!6.55e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.60e-09;42!UBERON:0003509;1.60e-09;42!UBERON:0004572;1.60e-09;42!UBERON:0004573;3.57e-09;33!UBERON:0004571;3.57e-09;33!UBERON:0002199;2.41e-08;46!UBERON:0002416;2.41e-08;46!UBERON:0002097;7.45e-08;41!UBERON:0007500;7.68e-08;56!UBERON:0001981;7.68e-08;56!UBERON:0004537;7.68e-08;56!UBERON:0002049;7.89e-08;75!UBERON:0007798;7.89e-08;75!UBERON:0000055;2.34e-07;65!UBERON:0003102;3.70e-07;50!UBERON:0004535;5.94e-07;109!UBERON:0000947;6.36e-07;21!UBERON:0010191;6.36e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.92e-23,109;UBERON:0001009,3.34e-21,112;UBERON:0002049,5.34e-17,78;UBERON:0007798,5.34e-17,78;UBERON:0007503,1.01e-15,78;UBERON:0002329,2.01e-15,71;UBERON:0003059,2.01e-15,71;UBERON:0007282,2.01e-15,71;UBERON:0004290,2.01e-15,71;UBERON:0009618,2.01e-15,71;UBERON:0004872,6.12e-15,83;UBERON:0007524,7.14e-15,73;UBERON:0000486,9.52e-15,83;UBERON:0003077,1.29e-14,72;UBERON:0007285,1.29e-14,72;UBERON:0000055,4.63e-14,68;UBERON:0000926,8.82e-14,315;UBERON:0004120,8.82e-14,315;UBERON:0006603,8.82e-14,315;UBERON:0007500,5.37e-13,59;UBERON:0001981,5.37e-13,59;UBERON:0004537,5.37e-13,59;UBERON:0006965,5.37e-13,59;UBERON:0001134,7.16e-13,62;UBERON:0002036,7.16e-13,62;UBERON:0003082,7.16e-13,62;UBERON:0001637,7.52e-13,42;UBERON:0003509,7.52e-13,42;UBERON:0004572,7.52e-13,42;UBERON:0002385,1.14e-12,64;UBERON:0001015,1.14e-12,64;UBERON:0000383,1.14e-12,64;UBERON:0002199,5.53e-12,46;UBERON:0002416,5.53e-12,46;UBERON:0003102,1.03e-11,99;UBERON:0000490,5.84e-11,148;UBERON:0004573,4.09e-10,33;UBERON:0004571,4.09e-10,33;UBERON:0002097,1.16e-09,41;UBERON:0003914,1.92e-09,117;UBERON:0005256,6.93e-09,122;UBERON:0002384,3.05e-08,371;UBERON:0003104,1.75e-07,160;UBERON:0009142,1.75e-07,160;UBERON:0000947,6.55e-07,21;UBERON:0010191,6.55e-07,21 | |||
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| ||
|short_description=p1@RSU1 | |||
}} | }} |
Latest revision as of 09:17, 17 September 2015
Short description: | p1@RSU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RSU1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377921, ENST00000464074, uc001iok.2_5end |
EntrezGene: | RSU1 |
HGNC: | 10464 |
UniProt: | Q15404F2Z2H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.30e-21 | 427 |
somatic stem cell | 5.31e-21 | 433 |
fibroblast | 4.94e-20 | 76 |
stem cell | 1.52e-19 | 441 |
mesodermal cell | 2.27e-15 | 121 |
muscle precursor cell | 1.70e-14 | 58 |
myoblast | 1.70e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.70e-14 | 58 |
muscle cell | 1.64e-13 | 55 |
smooth muscle cell | 7.02e-13 | 43 |
smooth muscle myoblast | 7.02e-13 | 43 |
electrically responsive cell | 1.59e-11 | 61 |
electrically active cell | 1.59e-11 | 61 |
vascular associated smooth muscle cell | 5.63e-11 | 32 |
skin fibroblast | 3.02e-10 | 23 |
embryonic cell | 1.31e-09 | 250 |
connective tissue cell | 1.06e-08 | 361 |
mesenchymal cell | 1.14e-08 | 354 |
motile cell | 3.11e-07 | 386 |