FFCP PHASE1:Hg19::chr10:21854898..21854902,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:21854898..21854902,+
|short_description=p@chr10:21854898..21854902,+
|description=CAGE_peak_at_chr10:21854898..21854902,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:21854898..21854902,+ | |||
|description=CAGE_peak_at_chr10:21854898..21854902,+ | |||
|id=chr10:21854898..21854902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.78e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.13e-07;1!DOID:10165;2.13e-07;1!DOID:1798;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.62e-07,1;DOID:10165,3.62e-07,1;DOID:1798,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-16!115;UBERON:0001049!9.40e-15!57;UBERON:0005068!9.40e-15!57;UBERON:0006241!9.40e-15!57;UBERON:0007135!9.40e-15!57;UBERON:0001017!5.97e-13!82;UBERON:0000073!1.21e-12!94;UBERON:0001016!1.21e-12!94;UBERON:0005743!3.53e-12!86;UBERON:0002346!7.07e-12!90;UBERON:0000955!7.71e-12!69;UBERON:0006238!7.71e-12!69;UBERON:0002616!2.00e-11!59;UBERON:0003080!3.63e-11!42;UBERON:0002780!1.30e-10!41;UBERON:0001890!1.30e-10!41;UBERON:0006240!1.30e-10!41;UBERON:0003075!2.67e-10!86;UBERON:0007284!2.67e-10!86;UBERON:0002020!1.12e-09!34;UBERON:0003528!1.12e-09!34;UBERON:0001893!1.90e-09!34;UBERON:0002791!4.54e-09!33;UBERON:0001869!1.59e-08!32;UBERON:0001950!1.41e-07!20;UBERON:0002619!1.77e-07!22;UBERON:0000956!2.51e-07!25;UBERON:0000203!2.51e-07!25;UBERON:0003056!6.60e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;4.85e-09;3!UBERON:0005382;4.85e-09;3!UBERON:0002791;4.94e-08;32!UBERON:0000941;6.78e-08;1!UBERON:0001785;6.78e-08;1!UBERON:0002464;6.78e-08;1!UBERON:0004904;6.78e-08;1!UBERON:0001021;6.78e-08;1!UBERON:0002134;7.97e-08;1!UBERON:0005208;7.97e-08;1!UBERON:0004145;7.97e-08;1!UBERON:0005946;7.97e-08;1!UBERON:0005965;7.97e-08;1!UBERON:0002078;7.97e-08;1!UBERON:0001869;1.44e-07;32!UBERON:0007029;2.13e-07;1!UBERON:0001874;2.13e-07;1!UBERON:0003112;2.13e-07;1!UBERON:0011158;2.13e-07;1!UBERON:0003128;2.13e-07;1!UBERON:0001703;2.13e-07;1!UBERON:0002241;2.13e-07;1!UBERON:0001950;3.91e-07;20!UBERON:0001893;4.18e-07;34!UBERON:0000369;5.53e-07;4!UBERON:0002435;5.53e-07;4!UBERON:0000204;5.53e-07;4!UBERON:0003528;6.14e-07;34!UBERON:0002020;6.14e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.52e-09,3;UBERON:0005382,3.52e-09,3;UBERON:0002791,2.32e-08,32;UBERON:0001869,2.32e-08,32;UBERON:0000941,6.59e-08,1;UBERON:0001785,6.59e-08,1;UBERON:0002464,6.59e-08,1;UBERON:0004904,6.59e-08,1;UBERON:0001021,6.59e-08,1;UBERON:0003902,6.59e-08,1;UBERON:0005425,6.59e-08,1;UBERON:0003528,7.84e-08,34;UBERON:0002020,7.84e-08,34;UBERON:0001893,7.84e-08,34;UBERON:0002134,8.54e-08,1;UBERON:0005208,8.54e-08,1;UBERON:0005946,8.54e-08,1;UBERON:0005965,8.54e-08,1;UBERON:0002078,8.54e-08,1;UBERON:0007029,9.71e-08,1;UBERON:0001874,1.83e-07,1;UBERON:0001016,2.33e-07,89;UBERON:0003112,2.83e-07,1;UBERON:0011158,2.83e-07,1;UBERON:0003128,2.83e-07,1;UBERON:0001703,2.83e-07,1;UBERON:0002241,2.83e-07,1;UBERON:0004761,2.83e-07,1;UBERON:0009617,2.83e-07,1;UBERON:0001950,3.18e-07,20;UBERON:0000369,4.35e-07,4;UBERON:0002435,4.35e-07,4;UBERON:0000204,4.35e-07,4;UBERON:0010082,4.35e-07,4;UBERON:0001017,6.21e-07,81 | |||
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| ||
|short_description=p@chr10:21854898..21854902,+ | |||
}} | }} |
Latest revision as of 12:33, 23 July 2015
Short description: | p@chr10:21854898..21854902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21854898..21854902, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 3.52e-09 | 3 |
dorsal striatum | 3.52e-09 | 3 |
regional part of telencephalon | 2.32e-08 | 32 |
cerebral hemisphere | 2.32e-08 | 32 |
cranial nerve II | 6.59e-08 | 1 |
cranial nerve | 6.59e-08 | 1 |
nerve trunk | 6.59e-08 | 1 |
nerve connecting eye with brain | 6.59e-08 | 1 |
nerve | 6.59e-08 | 1 |
retinal neural layer | 6.59e-08 | 1 |
presumptive neural retina | 6.59e-08 | 1 |
brain grey matter | 7.84e-08 | 34 |
gray matter | 7.84e-08 | 34 |
telencephalon | 7.84e-08 | 34 |
tricuspid valve | 8.54e-08 | 1 |
right atrium valve | 8.54e-08 | 1 |
outflow tract of atrium | 8.54e-08 | 1 |
outflow part of right atrium | 8.54e-08 | 1 |
right cardiac atrium | 8.54e-08 | 1 |
surface | 9.71e-08 | 1 |
putamen | 1.83e-07 | 1 |
nervous system | 2.33e-07 | 89 |
olfactory region | 2.83e-07 | 1 |
primary subdivision of skull | 2.83e-07 | 1 |
cranium | 2.83e-07 | 1 |
neurocranium | 2.83e-07 | 1 |
chondrocranium | 2.83e-07 | 1 |
cartilaginous neurocranium | 2.83e-07 | 1 |
head paraxial mesoderm | 2.83e-07 | 1 |
neocortex | 3.18e-07 | 20 |
corpus striatum | 4.35e-07 | 4 |
striatum | 4.35e-07 | 4 |
ventral part of telencephalon | 4.35e-07 | 4 |
future corpus striatum | 4.35e-07 | 4 |
central nervous system | 6.21e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.62e-07 | 1 |
endocrine pancreas cancer | 3.62e-07 | 1 |
pancreatic endocrine carcinoma | 3.62e-07 | 1 |