FFCP PHASE1:Hg19::chr10:5660118..5660195,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:5660118..5660195,-
|short_description=p1@ENST00000427341
|description=CAGE_peak_1_at_ENST00000427341_5end
|association_with_transcript=0bp_to_ENST00000427...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000427341_5end | |||
|cluster_id=chr10:5660118..5660195,- | |||
|description=CAGE_peak_1_at_ENST00000427341_5end | |||
|id=chr10:5660118..5660195,- | |||
|ontology_enrichment_celltype=CL:0002076!6.80e-23!43;CL:0002368!3.24e-20!13;CL:0000223!1.63e-18!59;CL:0000066!1.04e-14!254;CL:0002159!7.47e-13!13;CL:0000244!1.05e-11!4;CL:0000731!1.05e-11!4;CL:0002202!2.40e-11!9;CL:0002632!2.40e-11!9;CL:0002166!9.08e-10!3;CL:0000068!1.11e-09!3;CL:0000069!1.11e-09!3;CL:0000307!1.11e-09!3;CL:0000377!1.11e-09!3;CL:0002328!1.79e-09!3;CL:0002077!1.91e-09!33;CL:0002621!1.95e-09!3;CL:0000240!2.44e-07!6;CL:0000311!2.44e-07!6;CL:0000079!2.44e-07!6;CL:0000237!2.44e-07!6;CL:0000036!2.44e-07!6;CL:0000357!2.44e-07!6;CL:0000114!2.44e-07!6;CL:0002327!2.63e-07!4;CL:0002251!4.13e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.99e-23;13!CL:0002202;1.00e-19;9!CL:0002632;1.00e-19;9!CL:0000244;1.24e-19;4!CL:0000731;1.24e-19;4!CL:0002159;2.06e-16;14!CL:0002166;3.82e-16;3!CL:0000307;5.31e-16;3!CL:0002328;1.21e-15;3!CL:0002621;1.25e-15;3!CL:0002076;2.29e-15;42!CL:0002327;4.07e-12;4!CL:0000575;1.19e-10;2!CL:0002077;9.77e-09;34!CL:1001319;9.91e-07;1!CL:1000600;9.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.99e-23,13;CL:0002076,4.01e-20,42;CL:0002202,9.21e-20,9;CL:0002632,9.21e-20,9;CL:0000244,1.21e-19,4;CL:0000731,1.21e-19,4;CL:0000066,2.93e-18,253;CL:0002159,1.92e-16,14;CL:0002166,3.46e-16,3;CL:0000068,4.93e-16,3;CL:0000069,4.93e-16,3;CL:0000307,4.93e-16,3;CL:0000377,4.93e-16,3;CL:0000223,7.78e-16,58;CL:0002328,1.16e-15,3;CL:0002621,1.34e-15,3;CL:0002327,4.22e-12,4;CL:0000575,1.11e-10,2;CL:0002077,3.52e-10,34;CL:1001319,9.91e-07,1;CL:1000600,9.91e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;5.31e-16;3!CL:0000223;6.66e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!9.68e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.83e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.79e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.67e-14!5;UBERON:0001004!1.10e-12!72;UBERON:0000974!2.41e-12!10;UBERON:0005910!5.16e-12!6;UBERON:0004119!6.05e-12!169;UBERON:0000925!6.05e-12!169;UBERON:0006595!6.05e-12!169;UBERON:0000065!1.21e-10!53;UBERON:0004815!1.79e-09!3;UBERON:0002031!1.79e-09!3;UBERON:0001949!1.95e-09!3;UBERON:0007196!4.39e-09!14;UBERON:0001558!4.39e-09!14;UBERON:0001042!5.62e-09!10;UBERON:0009145!5.62e-09!10;UBERON:0003729!6.53e-09!5;UBERON:0000166!7.57e-09!21;UBERON:0000161!1.42e-08!35;UBERON:0001723!1.99e-08!3;UBERON:0001033!1.99e-08!3;UBERON:0010056!1.99e-08!3;UBERON:0006562!4.28e-08!11;UBERON:0000344!1.17e-07!12;UBERON:0000165!1.19e-07!28;UBERON:0000930!1.19e-07!28;UBERON:0001444!1.42e-07!48;UBERON:0001708!2.13e-07!4;UBERON:0001704!2.13e-07!4;UBERON:0001911!2.63e-07!4;UBERON:0005333!2.63e-07!4;UBERON:0008425!2.63e-07!4;UBERON:0005311!2.63e-07!4;UBERON:0002185!3.51e-07!4;UBERON:0000072!4.13e-07!46;UBERON:0003343!8.40e-07!4;UBERON:0004785!8.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.86e-25;12!UBERON:0000365;1.23e-24;5!UBERON:0005910;1.67e-20;6!UBERON:0004815;1.21e-15;3!UBERON:0002031;1.21e-15;3!UBERON:0001949;1.25e-15;3!UBERON:0001708;3.13e-12;4!UBERON:0008895;3.13e-12;4!UBERON:0001911;4.07e-12;4!UBERON:0005911;7.43e-12;36!UBERON:0007196;1.35e-11;15!UBERON:0001558;1.35e-11;15!UBERON:0002370;1.99e-10;2!UBERON:0005058;1.99e-10;2!UBERON:0009113;1.99e-10;2!UBERON:0003350;2.22e-10;8!UBERON:0011159;7.11e-10;5!UBERON:0002185;1.40e-09;5!UBERON:0003729;1.75e-09;13!UBERON:0000344;1.36e-08;20!UBERON:0004807;1.29e-07;22!UBERON:0003126;4.15e-07;7!UBERON:0001005;4.15e-07;7!UBERON:0000485;5.83e-07;7!UBERON:0003929;5.89e-07;7!UBERON:0004645;9.91e-07;1!UBERON:0001256;9.91e-07;1!UBERON:0001259;9.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.20e-24,5;UBERON:0005910,1.64e-20,6;UBERON:0004815,1.16e-15,3;UBERON:0002031,1.16e-15,3;UBERON:0001949,1.34e-15,3;UBERON:0001708,2.90e-12,4;UBERON:0008895,2.90e-12,4;UBERON:0001911,4.22e-12,4;UBERON:0005333,4.22e-12,4;UBERON:0008425,4.22e-12,4;UBERON:0005311,4.22e-12,4;UBERON:0001004,9.51e-12,74;UBERON:0007196,1.28e-11,15;UBERON:0001558,1.28e-11,15;UBERON:0003350,2.30e-10,8;UBERON:0004807,4.96e-10,28;UBERON:0011159,6.70e-10,5;UBERON:0002185,1.36e-09,5;UBERON:0003729,1.85e-09,13;UBERON:0008814,2.21e-09,18;UBERON:0000153,4.52e-09,62;UBERON:0007811,4.52e-09,62;UBERON:0000065,6.91e-09,54;UBERON:0004119,9.26e-09,160;UBERON:0000925,9.26e-09,160;UBERON:0006595,9.26e-09,160;UBERON:0005911,1.04e-08,82;UBERON:0000344,1.42e-08,20;UBERON:0010188,2.55e-08,6;UBERON:0002539,2.55e-08,6;UBERON:0008816,2.55e-08,6;UBERON:0003102,5.00e-08,99;UBERON:0000974,5.34e-08,10;UBERON:0003126,4.02e-07,7;UBERON:0001005,4.02e-07,7;UBERON:0000033,4.18e-07,56;UBERON:0000072,5.30e-07,47;UBERON:0005157,5.30e-07,47;UBERON:0004645,9.91e-07,1;UBERON:0001256,9.91e-07,1;UBERON:0001259,9.91e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0991640812414,2.71085326900425,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,2.5500670180478,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53717327336858,25.9108814561293,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39001141634502,1.1240175325762,0.703702806881416,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,33.9323898961696,29.9145455181435,5.0152772713595,18.0193041878656,19.5525166374258,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,2.02578175658972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.768760269460425,9.18811529961006,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,6.3506594398838,32.8448115012536,7.62236894029258,0,8.17960208075337,1.68471475667626,6.20802214951346,2.52695740227655,0,0,0,0,0,0,0,0,0,0,28.4246650537997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95862965542299,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.46112780877612,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,16.3647303682011,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39217125277945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0,4.37431427867373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39978572953381,0,0,0,0,0.419638523158333,8.08700438042865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9961562313343,0,0.183428598521679,4.27444964756251,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,2.1314340245882,2.79336214331361,0,0,0,0.217716747896961,0.342233301085281,0.336760265072938,0.0717222053926763,0,42.8995225579836,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p1@ENST00000427341 | |||
}} | }} |
Latest revision as of 14:14, 23 July 2015
Short description: | p1@ENST00000427341 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000427341_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427341_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.99e-23 | 13 |
endo-epithelial cell | 4.01e-20 | 42 |
epithelial cell of tracheobronchial tree | 9.21e-20 | 9 |
epithelial cell of lower respiratory tract | 9.21e-20 | 9 |
transitional epithelial cell | 1.21e-19 | 4 |
urothelial cell | 1.21e-19 | 4 |
epithelial cell | 2.93e-18 | 253 |
general ecto-epithelial cell | 1.92e-16 | 14 |
epithelial cell of Malassez | 3.46e-16 | 3 |
duct epithelial cell | 4.93e-16 | 3 |
branched duct epithelial cell | 4.93e-16 | 3 |
tracheal epithelial cell | 4.93e-16 | 3 |
tracheoblast | 4.93e-16 | 3 |
endodermal cell | 7.78e-16 | 58 |
bronchial epithelial cell | 1.16e-15 | 3 |
gingival epithelial cell | 1.34e-15 | 3 |
mammary gland epithelial cell | 4.22e-12 | 4 |
corneal epithelial cell | 1.11e-10 | 2 |
ecto-epithelial cell | 3.52e-10 | 34 |
bladder cell | 9.91e-07 | 1 |
lower urinary tract cell | 9.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.79e-12 | 14 |