FFCP PHASE1:Mm9::chrX:104344919..104344944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213438 | |EntrezGene=213438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=A2ASC2 | |UniProt=A2ASC2 | ||
|association_with_transcript=0bp_to_ENSMUST00000137107_5end | |association_with_transcript=0bp_to_ENSMUST00000137107_5end | ||
|cluster_id=chrX:104344919..104344944,+ | |||
|description=CAGE_peak_1_at_A630033H20Rik_5end | |description=CAGE_peak_1_at_A630033H20Rik_5end | ||
|id=chrX:104344919..104344944,+ | |id=chrX:104344919..104344944,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.85e-07!12;CL:0000988!3.57e-07!32;CL:0002032!3.57e-07!32;CL:0000037!3.57e-07!32;CL:0000566!3.57e-07!32;CL:0000837!3.57e-07!32;CL:0000084!9.38e-07!11;CL:0000827!9.38e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.85e-07!12;CL:0000988!3.57e-07!32;CL:0002032!3.57e-07!32;CL:0000037!3.57e-07!32;CL:0000566!3.57e-07!32;CL:0000837!3.57e-07!32;CL:0000084!9.38e-07!11;CL:0000827!9.38e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.92e-12,32;CL:0002032,2.92e-12,32;CL:0000037,2.92e-12,32;CL:0000837,2.92e-12,32;CL:0002031,1.79e-11,25;CL:0000838,6.26e-11,12;CL:0000542,7.45e-10,13;CL:0000051,7.45e-10,13;CL:0000084,1.21e-09,11;CL:0000827,1.21e-09,11;CL:0000738,1.97e-08,17;CL:0002087,1.97e-08,17;CL:0000791,1.33e-07,9;CL:0000789,1.33e-07,9;CL:0002420,1.33e-07,9;CL:0002419,1.33e-07,9;CL:0000790,1.33e-07,9;CL:0002320,1.61e-07,46;CL:0000134,1.61e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.99e-15!88;UBERON:0002193!3.90e-14!48;UBERON:0002390!5.33e-13!45;UBERON:0003061!5.33e-13!45;UBERON:0002405!1.47e-12!70;UBERON:0004177!1.52e-11!29;UBERON:0000926!2.39e-11!193;UBERON:0004120!2.39e-11!193;UBERON:0006603!2.39e-11!193;UBERON:0005057!2.71e-09!51;UBERON:0003408!3.27e-09!24;UBERON:0002370!7.12e-09!23;UBERON:0000974!7.12e-09!23;UBERON:0004807!7.12e-09!23;UBERON:0005058!7.12e-09!23;UBERON:0003351!7.12e-09!23;UBERON:0009113!7.12e-09!23;UBERON:0003295!7.12e-09!23;UBERON:0009722!7.12e-09!23;UBERON:0005562!7.12e-09!23;UBERON:0007690!7.12e-09!23;UBERON:0006562!5.60e-08!24;UBERON:0001557!5.60e-08!24;UBERON:0001042!5.60e-08!24;UBERON:0008814!5.60e-08!24;UBERON:0009145!5.60e-08!24;UBERON:0001004!7.29e-07!42 | |ontology_enrichment_uberon=UBERON:0003081!5.99e-15!88;UBERON:0002193!3.90e-14!48;UBERON:0002390!5.33e-13!45;UBERON:0003061!5.33e-13!45;UBERON:0002405!1.47e-12!70;UBERON:0004177!1.52e-11!29;UBERON:0000926!2.39e-11!193;UBERON:0004120!2.39e-11!193;UBERON:0006603!2.39e-11!193;UBERON:0005057!2.71e-09!51;UBERON:0003408!3.27e-09!24;UBERON:0002370!7.12e-09!23;UBERON:0000974!7.12e-09!23;UBERON:0004807!7.12e-09!23;UBERON:0005058!7.12e-09!23;UBERON:0003351!7.12e-09!23;UBERON:0009113!7.12e-09!23;UBERON:0003295!7.12e-09!23;UBERON:0009722!7.12e-09!23;UBERON:0005562!7.12e-09!23;UBERON:0007690!7.12e-09!23;UBERON:0006562!5.60e-08!24;UBERON:0001557!5.60e-08!24;UBERON:0001042!5.60e-08!24;UBERON:0008814!5.60e-08!24;UBERON:0009145!5.60e-08!24;UBERON:0001004!7.29e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.44e-19,48;UBERON:0002405,4.44e-19,48;UBERON:0002390,8.14e-18,45;UBERON:0003061,8.14e-18,45;UBERON:0004177,3.61e-17,29;UBERON:0005057,3.61e-17,29;UBERON:0003408,4.72e-14,24;UBERON:0002370,2.03e-13,23;UBERON:0000974,2.03e-13,23;UBERON:0004807,2.03e-13,23;UBERON:0005058,2.03e-13,23;UBERON:0003351,2.03e-13,23;UBERON:0009113,2.03e-13,23;UBERON:0003295,2.03e-13,23;UBERON:0009722,2.03e-13,23;UBERON:0005562,2.03e-13,23;UBERON:0007690,2.03e-13,23;UBERON:0003081,2.76e-13,87;UBERON:0000077,5.43e-13,35;UBERON:0006562,1.25e-12,24;UBERON:0001557,1.25e-12,24;UBERON:0001042,1.25e-12,24;UBERON:0008814,1.25e-12,24;UBERON:0009145,1.25e-12,24;UBERON:0000926,1.12e-10,120;UBERON:0004120,1.12e-10,120;UBERON:0006603,1.12e-10,120;UBERON:0000072,1.25e-10,27;UBERON:0001004,3.48e-10,42;UBERON:0000065,1.20e-09,41;UBERON:0007811,1.54e-07,36;UBERON:0002384,1.61e-07,46;UBERON:0000153,7.83e-07,43 | |||
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| ||
|short_description=p1@A630033H20Rik | |short_description=p1@A630033H20Rik | ||
}} | }} |
Latest revision as of 12:47, 1 October 2015
Short description: | p1@A630033H20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A630033H20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000137107_5end |
EntrezGene: | A630033H20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.92e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.92e-12 | 32 |
hematopoietic stem cell | 2.92e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.92e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.79e-11 | 25 |
lymphoid lineage restricted progenitor cell | 6.26e-11 | 12 |
lymphocyte | 7.45e-10 | 13 |
common lymphoid progenitor | 7.45e-10 | 13 |
T cell | 1.21e-09 | 11 |
pro-T cell | 1.21e-09 | 11 |
leukocyte | 1.97e-08 | 17 |
nongranular leukocyte | 1.97e-08 | 17 |
mature alpha-beta T cell | 1.33e-07 | 9 |
alpha-beta T cell | 1.33e-07 | 9 |
immature T cell | 1.33e-07 | 9 |
mature T cell | 1.33e-07 | 9 |
immature alpha-beta T cell | 1.33e-07 | 9 |
connective tissue cell | 1.61e-07 | 46 |
mesenchymal cell | 1.61e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.44e-19 | 48 |
immune system | 4.44e-19 | 48 |
hematopoietic system | 8.14e-18 | 45 |
blood island | 8.14e-18 | 45 |
hemopoietic organ | 3.61e-17 | 29 |
immune organ | 3.61e-17 | 29 |
gland of gut | 4.72e-14 | 24 |
thymus | 2.03e-13 | 23 |
neck | 2.03e-13 | 23 |
respiratory system epithelium | 2.03e-13 | 23 |
hemolymphoid system gland | 2.03e-13 | 23 |
pharyngeal epithelium | 2.03e-13 | 23 |
thymic region | 2.03e-13 | 23 |
pharyngeal gland | 2.03e-13 | 23 |
entire pharyngeal arch endoderm | 2.03e-13 | 23 |
thymus primordium | 2.03e-13 | 23 |
early pharyngeal endoderm | 2.03e-13 | 23 |
lateral plate mesoderm | 2.76e-13 | 87 |
mixed endoderm/mesoderm-derived structure | 5.43e-13 | 35 |
pharynx | 1.25e-12 | 24 |
upper respiratory tract | 1.25e-12 | 24 |
chordate pharynx | 1.25e-12 | 24 |
pharyngeal arch system | 1.25e-12 | 24 |
pharyngeal region of foregut | 1.25e-12 | 24 |
mesoderm | 1.12e-10 | 120 |
mesoderm-derived structure | 1.12e-10 | 120 |
presumptive mesoderm | 1.12e-10 | 120 |
segment of respiratory tract | 1.25e-10 | 27 |
respiratory system | 3.48e-10 | 42 |
respiratory tract | 1.20e-09 | 41 |
craniocervical region | 1.54e-07 | 36 |
connective tissue | 1.61e-07 | 46 |
anterior region of body | 7.83e-07 | 43 |