FFCP PHASE1:Hg19::chr12:123745847..123745904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_ENST00000544890_5end | |association_with_transcript=-81bp_to_ENST00000544890_5end | ||
|cluster_id=chr12:123745847..123745904,- | |||
|description=CAGE_peak_1_at_ENST00000544890_5end | |description=CAGE_peak_1_at_ENST00000544890_5end | ||
|id=chr12:123745847..123745904,- | |id=chr12:123745847..123745904,- | ||
|ontology_enrichment_celltype=CL:0000055!1.93e-16!180;CL:0000220!2.66e-12!246;CL:0002321!6.68e-12!248;CL:0000222!1.60e-11!119;CL:0000393!4.55e-10!60;CL:0000211!4.55e-10!60;CL:0000680!2.65e-09!57;CL:0000056!2.65e-09!57;CL:0000355!2.65e-09!57;CL:0000187!2.43e-08!54;CL:0000183!3.68e-08!59;CL:0000192!6.70e-08!42;CL:0000514!6.70e-08!42;CL:0000057!1.41e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.93e-16!180;CL:0000220!2.66e-12!246;CL:0002321!6.68e-12!248;CL:0000222!1.60e-11!119;CL:0000393!4.55e-10!60;CL:0000211!4.55e-10!60;CL:0000680!2.65e-09!57;CL:0000056!2.65e-09!57;CL:0000355!2.65e-09!57;CL:0000187!2.43e-08!54;CL:0000183!3.68e-08!59;CL:0000192!6.70e-08!42;CL:0000514!6.70e-08!42;CL:0000057!1.41e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.41e-11,121;CL:0002321,2.67e-09,250;CL:0000393,2.87e-09,61;CL:0000211,2.87e-09,61;CL:0000680,1.21e-08,58;CL:0000056,1.21e-08,58;CL:0000355,1.21e-08,58;CL:0000057,6.68e-08,76;CL:0000187,1.33e-07,55;CL:0000192,1.61e-07,43;CL:0000514,1.61e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.16e-13!365;UBERON:0000477!1.02e-10!286;UBERON:0000468!1.21e-09!659;UBERON:0000119!1.77e-09!312;UBERON:0005256!1.93e-09!143;UBERON:0000483!1.96e-09!309;UBERON:0002100!2.71e-09!216;UBERON:0004111!3.49e-09!241;UBERON:0000914!3.90e-09!83;UBERON:0002329!3.90e-09!83;UBERON:0003077!3.90e-09!83;UBERON:0003059!3.90e-09!83;UBERON:0007282!3.90e-09!83;UBERON:0009618!3.90e-09!83;UBERON:0007285!3.90e-09!83;UBERON:0000025!6.06e-09!194;UBERON:0001134!1.21e-08!61;UBERON:0002036!1.21e-08!61;UBERON:0003082!1.21e-08!61;UBERON:0000467!2.66e-08!625;UBERON:0000486!3.91e-08!82;UBERON:0000480!4.67e-08!626;UBERON:0004290!4.88e-08!70;UBERON:0002385!7.91e-08!63;UBERON:0001015!7.91e-08!63;UBERON:0000383!7.91e-08!63;UBERON:0001637!3.85e-07!42;UBERON:0003509!3.85e-07!42;UBERON:0004572!3.85e-07!42;UBERON:0003914!9.94e-07!118 | |ontology_enrichment_uberon=UBERON:0000475!1.16e-13!365;UBERON:0000477!1.02e-10!286;UBERON:0000468!1.21e-09!659;UBERON:0000119!1.77e-09!312;UBERON:0005256!1.93e-09!143;UBERON:0000483!1.96e-09!309;UBERON:0002100!2.71e-09!216;UBERON:0004111!3.49e-09!241;UBERON:0000914!3.90e-09!83;UBERON:0002329!3.90e-09!83;UBERON:0003077!3.90e-09!83;UBERON:0003059!3.90e-09!83;UBERON:0007282!3.90e-09!83;UBERON:0009618!3.90e-09!83;UBERON:0007285!3.90e-09!83;UBERON:0000025!6.06e-09!194;UBERON:0001134!1.21e-08!61;UBERON:0002036!1.21e-08!61;UBERON:0003082!1.21e-08!61;UBERON:0000467!2.66e-08!625;UBERON:0000486!3.91e-08!82;UBERON:0000480!4.67e-08!626;UBERON:0004290!4.88e-08!70;UBERON:0002385!7.91e-08!63;UBERON:0001015!7.91e-08!63;UBERON:0000383!7.91e-08!63;UBERON:0001637!3.85e-07!42;UBERON:0003509!3.85e-07!42;UBERON:0004572!3.85e-07!42;UBERON:0003914!9.94e-07!118 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.18e-10,78;UBERON:0005256,6.51e-09,122;UBERON:0007524,1.20e-08,73;UBERON:0000483,1.41e-08,306;UBERON:0000486,1.89e-08,83;UBERON:0001134,2.27e-08,62;UBERON:0002036,2.27e-08,62;UBERON:0003082,2.27e-08,62;UBERON:0000119,2.67e-08,309;UBERON:0003077,3.00e-08,72;UBERON:0007285,3.00e-08,72;UBERON:0002329,3.06e-08,71;UBERON:0003059,3.06e-08,71;UBERON:0007282,3.06e-08,71;UBERON:0004290,3.06e-08,71;UBERON:0009618,3.06e-08,71;UBERON:0002385,1.20e-07,64;UBERON:0001015,1.20e-07,64;UBERON:0000383,1.20e-07,64;UBERON:0004111,3.06e-07,240;UBERON:0001637,3.63e-07,42;UBERON:0003509,3.63e-07,42;UBERON:0004572,3.63e-07,42;UBERON:0000025,4.51e-07,192;UBERON:0004573,7.16e-07,33;UBERON:0004571,7.16e-07,33 | |||
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| ||
|short_description=p1@ENST00000544890 | |short_description=p1@ENST00000544890 | ||
}} | }} |
Latest revision as of 06:14, 24 July 2015
Short description: | p1@ENST00000544890 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000544890_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_ENST00000544890_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.41e-11 | 121 |
embryonic cell | 2.67e-09 | 250 |
electrically responsive cell | 2.87e-09 | 61 |
electrically active cell | 2.87e-09 | 61 |
muscle precursor cell | 1.21e-08 | 58 |
myoblast | 1.21e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-08 | 58 |
fibroblast | 6.68e-08 | 76 |
muscle cell | 1.33e-07 | 55 |
smooth muscle cell | 1.61e-07 | 43 |
smooth muscle myoblast | 1.61e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.18e-10 | 78 |
trunk mesenchyme | 6.51e-09 | 122 |
dense mesenchyme tissue | 1.20e-08 | 73 |
epithelium | 1.41e-08 | 306 |
multilaminar epithelium | 1.89e-08 | 83 |
skeletal muscle tissue | 2.27e-08 | 62 |
striated muscle tissue | 2.27e-08 | 62 |
myotome | 2.27e-08 | 62 |
cell layer | 2.67e-08 | 309 |
paraxial mesoderm | 3.00e-08 | 72 |
presumptive paraxial mesoderm | 3.00e-08 | 72 |
somite | 3.06e-08 | 71 |
presomitic mesoderm | 3.06e-08 | 71 |
presumptive segmental plate | 3.06e-08 | 71 |
dermomyotome | 3.06e-08 | 71 |
trunk paraxial mesoderm | 3.06e-08 | 71 |
muscle tissue | 1.20e-07 | 64 |
musculature | 1.20e-07 | 64 |
musculature of body | 1.20e-07 | 64 |
anatomical conduit | 3.06e-07 | 240 |
artery | 3.63e-07 | 42 |
arterial blood vessel | 3.63e-07 | 42 |
arterial system | 3.63e-07 | 42 |
tube | 4.51e-07 | 192 |
systemic artery | 7.16e-07 | 33 |
systemic arterial system | 7.16e-07 | 33 |