FFCP PHASE1:Hg19::chr17:6338479..6338490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23746 | |EntrezGene=23746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=359 | |HGNC=359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZN9 | |UniProt=Q9NZN9 | ||
|association_with_transcript=0bp_to_ENST00000381129_5end | |association_with_transcript=0bp_to_ENST00000381129_5end | ||
|cluster_id=chr17:6338479..6338490,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_AIPL1_5end | |description=CAGE_peak_2_at_AIPL1_5end | ||
|id=chr17:6338479..6338490,- | |id=chr17:6338479..6338490,- | ||
|ontology_enrichment_celltype=CL:0002322!4.98e-45!5 | |ontology_enrichment_celltype=CL:0002322!4.98e-45!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.70e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!8.05e-30!2;UBERON:0002757!8.05e-30!2;UBERON:0010134!8.05e-30!2;UBERON:0002784!8.05e-30!2;UBERON:0005408!8.05e-30!2;UBERON:0001899!8.05e-30!2;UBERON:0003296!1.92e-15!4;UBERON:0010133!1.92e-15!4;UBERON:0000966!1.50e-12!5;UBERON:0005388!1.50e-12!5;UBERON:0001802!1.50e-12!5;UBERON:0000970!7.85e-12!20;UBERON:0002104!2.79e-11!21;UBERON:0000020!2.53e-10!23;UBERON:0001032!6.66e-10!24;UBERON:0004456!6.66e-10!24;UBERON:0001894!3.17e-09!7;UBERON:0006222!3.17e-09!7;UBERON:0002360!2.31e-08!2;UBERON:0000094!2.31e-08!2;UBERON:0007645!2.31e-08!2;UBERON:0000019!2.18e-07!19;UBERON:0000047!2.18e-07!19;UBERON:0004088!2.18e-07!19;UBERON:0003072!2.18e-07!19;UBERON:0003071!2.18e-07!19;UBERON:0004128!2.18e-07!19;UBERON:0001456!9.87e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0000966;2.72e-27;5!UBERON:0005388;2.72e-27;5!UBERON:0001802;2.72e-27;5!UBERON:0001894;7.84e-20;7!UBERON:0000970;1.17e-15;20!UBERON:0002104;5.94e-15;21!UBERON:0000020;1.01e-13;23!UBERON:0001032;3.48e-13;24!UBERON:0004456;3.48e-13;24!UBERON:0000019;5.94e-08;19!UBERON:0000047;5.94e-08;19!UBERON:0004088;5.94e-08;19!UBERON:0010230;5.94e-08;19!UBERON:0001456;2.77e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0000966,6.07e-23,6;UBERON:0005388,6.07e-23,6;UBERON:0001802,6.07e-23,6;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0000970,5.94e-15,21;UBERON:0002104,5.94e-15,21;UBERON:0000020,3.48e-13,24;UBERON:0001032,3.48e-13,24;UBERON:0004456,3.48e-13,24;UBERON:0003056,4.34e-09,61;UBERON:0000019,1.33e-07,20;UBERON:0000047,1.33e-07,20;UBERON:0010312,1.33e-07,20;UBERON:0004088,1.33e-07,20;UBERON:0010230,1.33e-07,20;UBERON:0003072,1.33e-07,20;UBERON:0004128,1.33e-07,20;UBERON:0003071,1.33e-07,20;UBERON:0001456,5.40e-07,22;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82 | |||
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|short_description=p2@AIPL1 | |short_description=p2@AIPL1 | ||
}} | }} |
Latest revision as of 20:40, 16 September 2015
Short description: | p2@AIPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AIPL1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000381129_5end |
EntrezGene: | AIPL1 |
HGNC: | 359 |
UniProt: | Q9NZN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.84e-66 | 2 |
regional part of epithalamus | 2.84e-66 | 2 |
secretory circumventricular organ | 2.84e-66 | 2 |
circumventricular organ | 2.84e-66 | 2 |
epithalamus | 2.84e-66 | 2 |
gland of diencephalon | 8.36e-34 | 4 |
neuroendocrine gland | 8.36e-34 | 4 |
regional part of diencephalon | 8.36e-34 | 4 |
retina | 6.07e-23 | 6 |
photoreceptor array | 6.07e-23 | 6 |
posterior segment of eyeball | 6.07e-23 | 6 |
diencephalon | 7.84e-20 | 7 |
future diencephalon | 7.84e-20 | 7 |
eye | 5.94e-15 | 21 |
visual system | 5.94e-15 | 21 |
sense organ | 3.48e-13 | 24 |
sensory system | 3.48e-13 | 24 |
entire sense organ system | 3.48e-13 | 24 |
pre-chordal neural plate | 4.34e-09 | 61 |
camera-type eye | 1.33e-07 | 20 |
simple eye | 1.33e-07 | 20 |
immature eye | 1.33e-07 | 20 |
ocular region | 1.33e-07 | 20 |
eyeball of camera-type eye | 1.33e-07 | 20 |
optic cup | 1.33e-07 | 20 |
optic vesicle | 1.33e-07 | 20 |
eye primordium | 1.33e-07 | 20 |
face | 5.40e-07 | 22 |
neural plate | 6.53e-07 | 82 |
presumptive neural plate | 6.53e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.70e-09 | 4 |