FFCP PHASE1:Hg19::chr17:65990349..65990362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:65990349..65990362,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr17:65990349..65990362,- | |description=CAGE_peak_at_chr17:65990349..65990362,- | ||
|id=chr17:65990349..65990362,- | |id=chr17:65990349..65990362,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002144;9.09e-34;3!CL:0002327;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,7.70e-34,3;CL:0002327,1.31e-07,4;CL:0000115,7.22e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.15e-26;1!UBERON:0005425;5.92e-26;1!UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.12e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.31e-07;4!DOID:1612;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.31e-07,4;DOID:1612,1.31e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;9.09e-34;3!UBERON:0001915;9.09e-34;3!UBERON:0001982;9.09e-34;3!UBERON:0000941;5.92e-26;1!UBERON:0001785;5.92e-26;1!UBERON:0002464;5.92e-26;1!UBERON:0004904;5.92e-26;1!UBERON:0001021;5.92e-26;1!UBERON:0003714;1.07e-13;2!UBERON:0005162;1.07e-13;2!UBERON:0000122;1.07e-13;2!UBERON:0001911;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,7.70e-34,3;UBERON:0001915,7.70e-34,3;UBERON:0001982,7.70e-34,3;UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0001911,1.31e-07,4;UBERON:0005333,1.31e-07,4;UBERON:0008425,1.31e-07,4;UBERON:0005311,1.31e-07,4;UBERON:0001781,1.69e-07,4 | |||
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| ||
|short_description=p@chr17:65990349..65990362,- | |short_description=p@chr17:65990349..65990362,- | ||
}} | }} |
Latest revision as of 20:09, 25 July 2015
Short description: | p@chr17:65990349..65990362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:65990349..65990362, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 7.70e-34 | 3 |
mammary gland epithelial cell | 1.31e-07 | 4 |
endothelial cell | 7.22e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 7.70e-34 | 3 |
endothelium of capillary | 7.70e-34 | 3 |
capillary | 7.70e-34 | 3 |
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
mammary gland | 1.31e-07 | 4 |
mammary bud | 1.31e-07 | 4 |
mammary ridge | 1.31e-07 | 4 |
mammary placode | 1.31e-07 | 4 |
layer of retina | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.31e-07 | 4 |
breast cancer | 1.31e-07 | 4 |