FFCP PHASE1:Hg19::chr18:19233695..19233699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:19233695..19233699,- | |||
|description=CAGE_peak_at_chr18:19233695..19233699,- | |description=CAGE_peak_at_chr18:19233695..19233699,- | ||
|id=chr18:19233695..19233699,- | |id=chr18:19233695..19233699,- | ||
|ontology_enrichment_celltype=CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53;CL:0000838!5.17e-07!52 | |ontology_enrichment_celltype=CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53;CL:0000838!5.17e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.58e-19;3!UBERON:0005425;5.41e-15;1 | |||
|ontology_enrichment_disease=DOID:162!2.13e-09!235;DOID:14566!2.92e-09!239;DOID:305!2.41e-08!106;DOID:0050687!6.54e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.50e-14;1!DOID:10165;1.50e-14;1!DOID:1798;1.50e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.15e-14,1;DOID:10165,3.15e-14,1;DOID:1798,3.15e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.41e-15;1!UBERON:0002171;5.41e-15;1!UBERON:0001785;5.41e-15;1!UBERON:0002464;5.41e-15;1!UBERON:0004904;5.41e-15;1!UBERON:0001021;5.41e-15;1!UBERON:0006518;5.41e-15;1!UBERON:0008949;5.41e-15;1!UBERON:0000101;5.41e-15;1!UBERON:0002167;5.41e-15;1!UBERON:0003714;3.81e-08;2!UBERON:0005162;3.81e-08;2!UBERON:0000122;3.81e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.73e-15,1;UBERON:0001785,4.73e-15,1;UBERON:0002464,4.73e-15,1;UBERON:0004904,4.73e-15,1;UBERON:0001021,4.73e-15,1;UBERON:0003902,4.73e-15,1;UBERON:0005425,4.73e-15,1;UBERON:0002171,5.42e-15,1;UBERON:0006518,5.42e-15,1;UBERON:0008949,5.42e-15,1;UBERON:0000101,5.42e-15,1;UBERON:0002167,5.42e-15,1;UBERON:0000966,5.43e-10,6;UBERON:0005388,5.43e-10,6;UBERON:0001802,5.43e-10,6;UBERON:0003714,3.56e-08,2;UBERON:0005162,3.56e-08,2;UBERON:0000122,3.56e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.542270404062111,1.13735385989937,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0.425208599930087,0,0.336985893439485,0.150176892841506,0,0.570025487482497,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,1.17447437874188,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0,0,0.768547918354051,0.130059347559878,0.493313713811028,1.10540007114339,0,0,0.535081656179426,0,0.226618685395132,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.245976877086227,0,0,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.591092280605782,0.431255149719035,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.721287081534056,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0.371606350251437,0.28853842595289,0.569134746787313,0.318852545457645,0.59873811429845,0.191505370132367,0,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0.174919999992391,0.724999575434793,0.1137934482855,0,0.236387681767936,0.689486746482929,0.291604613383254,0.520874984799877,0,0,0,0.331737779793674,0,0,0,0.697118721393016,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.335643173951685,0.37950746544837,0,0.210998064528027,0.326465616318295,0,0.216388639742091,1.99052386215701,0.442287822516696,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0.729819156862664,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.435296032902013,0.17472666824203,0,0.290268993867255,0.584714536689484,1.39596276990456,0,0,0,0.137041924646751,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0.213452994739353,0,0,0.343609788497747,0.171594997861965,0.14405479798815,0,0.471388069233591,0,0.313808538937,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.393709926058995,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0,2.48543433208317,0.496166021811951,0.592834895693833,0.60896299190448,0,0,0,0,0.655745261419609,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0.37494122388632,0,0,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0.39997479170986,0.320075189082423,0.172214979660816,0,0,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0.169732529954025,0.850299680406731,0.371807292777007,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| ||
|short_description=p@chr18:19233695..19233699,- | |short_description=p@chr18:19233695..19233699,- | ||
}} | }} |
Latest revision as of 23:51, 25 July 2015
Short description: | p@chr18:19233695..19233699, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19233695..19233699, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.73e-15 | 1 |
cranial nerve | 4.73e-15 | 1 |
nerve trunk | 4.73e-15 | 1 |
nerve connecting eye with brain | 4.73e-15 | 1 |
nerve | 4.73e-15 | 1 |
retinal neural layer | 4.73e-15 | 1 |
presumptive neural retina | 4.73e-15 | 1 |
lower lobe of right lung | 5.42e-15 | 1 |
right lung lobe | 5.42e-15 | 1 |
lower lobe of lung | 5.42e-15 | 1 |
lobe of lung | 5.42e-15 | 1 |
right lung | 5.42e-15 | 1 |
retina | 5.43e-10 | 6 |
photoreceptor array | 5.43e-10 | 6 |
posterior segment of eyeball | 5.43e-10 | 6 |
neural tissue | 3.56e-08 | 2 |
multi cell component structure | 3.56e-08 | 2 |
neuron projection bundle | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.15e-14 | 1 |
endocrine pancreas cancer | 3.15e-14 | 1 |
pancreatic endocrine carcinoma | 3.15e-14 | 1 |