FFCP PHASE1:Hg19::chr12:90102594..90102647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=490 | |EntrezGene=490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=814 | |HGNC=814 | ||
|TSSclassifier=strong | |||
|UniProt=P20020 | |UniProt=P20020 | ||
|association_with_transcript=0bp_to_ENST00000428670_5end | |association_with_transcript=0bp_to_ENST00000428670_5end | ||
|cluster_id=chr12:90102594..90102647,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ATP2B1_5end | |description=CAGE_peak_1_at_ATP2B1_5end | ||
|id=chr12:90102594..90102647,- | |id=chr12:90102594..90102647,- | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-26!42;CL:0000860!6.85e-26!45;CL:0000738!2.42e-23!140;CL:0002087!3.42e-21!119;CL:0000766!1.34e-18!76;CL:0002009!2.33e-18!65;CL:0002031!4.23e-18!124;CL:0002194!2.21e-17!63;CL:0000576!2.21e-17!63;CL:0000040!2.21e-17!63;CL:0000559!2.21e-17!63;CL:0000557!8.93e-16!71;CL:0000839!1.21e-13!70;CL:0002032!5.22e-13!165;CL:0000837!5.22e-13!165;CL:0000037!6.76e-13!172;CL:0000566!6.76e-13!172;CL:0000134!6.30e-11!358;CL:0002320!9.33e-11!365;CL:0000988!7.85e-10!182;CL:0000763!8.73e-09!112;CL:0000049!8.73e-09!112;CL:0000048!1.04e-07!430;CL:0000723!5.55e-07!436 | |ontology_enrichment_celltype=CL:0002057!1.53e-26!42;CL:0000860!6.85e-26!45;CL:0000738!2.42e-23!140;CL:0002087!3.42e-21!119;CL:0000766!1.34e-18!76;CL:0002009!2.33e-18!65;CL:0002031!4.23e-18!124;CL:0002194!2.21e-17!63;CL:0000576!2.21e-17!63;CL:0000040!2.21e-17!63;CL:0000559!2.21e-17!63;CL:0000557!8.93e-16!71;CL:0000839!1.21e-13!70;CL:0002032!5.22e-13!165;CL:0000837!5.22e-13!165;CL:0000037!6.76e-13!172;CL:0000566!6.76e-13!172;CL:0000134!6.30e-11!358;CL:0002320!9.33e-11!365;CL:0000988!7.85e-10!182;CL:0000763!8.73e-09!112;CL:0000049!8.73e-09!112;CL:0000048!1.04e-07!430;CL:0000723!5.55e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.63e-20;33!CL:0002057;5.63e-20;33!CL:0000576;2.09e-13;48!CL:0000473;4.54e-13;39!CL:0000234;4.54e-13;39!CL:0000766;1.47e-09;69!CL:0002087;1.02e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-26,42;CL:0002057,1.53e-26,42;CL:0000738,3.92e-23,136;CL:0000473,8.90e-22,48;CL:0000234,8.90e-22,48;CL:0002087,5.05e-21,115;CL:0000766,1.38e-18,72;CL:0002009,1.96e-18,61;CL:0002031,6.86e-18,120;CL:0002194,1.91e-17,59;CL:0000576,1.91e-17,59;CL:0000040,1.91e-17,59;CL:0000559,1.91e-17,59;CL:0000557,9.96e-16,67;CL:0000839,1.49e-13,66;CL:0002032,9.71e-13,161;CL:0000837,9.71e-13,161;CL:0000037,1.27e-12,168;CL:0000134,5.66e-11,354;CL:0002320,8.45e-11,361;CL:0000988,6.56e-10,177;CL:0000763,1.49e-08,108;CL:0000049,1.49e-08,108;CL:0000048,7.16e-08,427;CL:0000723,3.92e-07,433;CL:0000034,8.52e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.50e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-15!102;UBERON:0003061!2.11e-15!102;UBERON:0002371!3.51e-14!80;UBERON:0001474!6.82e-13!86;UBERON:0002193!1.78e-12!112;UBERON:0004765!3.46e-12!101;UBERON:0001434!3.46e-12!101;UBERON:0002384!2.04e-11!375;UBERON:0002619!1.65e-10!22;UBERON:0001950!7.72e-10!20;UBERON:0001869!5.37e-09!32;UBERON:0002405!6.30e-09!115;UBERON:0002780!1.20e-08!41;UBERON:0001890!1.20e-08!41;UBERON:0006240!1.20e-08!41;UBERON:0003080!4.14e-08!42;UBERON:0000956!7.02e-08!25;UBERON:0000203!7.02e-08!25;UBERON:0001893!9.20e-08!34;UBERON:0002020!1.49e-07!34;UBERON:0003528!1.49e-07!34;UBERON:0002791!2.04e-07!33;UBERON:0002204!5.33e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.60e-10;22!UBERON:0001950;7.42e-10;20!UBERON:0001869;3.81e-08;32!UBERON:0000956;6.77e-08;25!UBERON:0000203;6.77e-08;25!UBERON:0002791;2.61e-07;32!UBERON:0003528;6.51e-07;34!UBERON:0002020;6.51e-07;34!UBERON:0001893;6.98e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.20e-15,98;UBERON:0003061,3.20e-15,98;UBERON:0002371,4.71e-14,76;UBERON:0001474,1.01e-12,82;UBERON:0002193,2.98e-12,108;UBERON:0004765,3.67e-12,90;UBERON:0001434,3.98e-12,100;UBERON:0002384,1.85e-11,371;UBERON:0002405,1.49e-10,93;UBERON:0002619,1.65e-10,22;UBERON:0001950,7.72e-10,20;UBERON:0001869,5.37e-09,32;UBERON:0002780,1.20e-08,41;UBERON:0001890,1.20e-08,41;UBERON:0003080,1.20e-08,41;UBERON:0006240,1.20e-08,41;UBERON:0002791,6.08e-08,32;UBERON:0000956,7.02e-08,25;UBERON:0000203,7.02e-08,25;UBERON:0001893,9.20e-08,34;UBERON:0003528,1.49e-07,34;UBERON:0002020,1.49e-07,34;UBERON:0002204,4.33e-07,167 | |||
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| ||
|short_description=p1@ATP2B1 | |short_description=p1@ATP2B1 | ||
}} | }} |
Latest revision as of 18:56, 15 September 2015
Short description: | p1@ATP2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP2B1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000428670_5end |
EntrezGene: | ATP2B1 |
HGNC: | 814 |
UniProt: | P20020 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.53e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-26 | 42 |
leukocyte | 3.92e-23 | 136 |
defensive cell | 8.90e-22 | 48 |
phagocyte | 8.90e-22 | 48 |
nongranular leukocyte | 5.05e-21 | 115 |
myeloid leukocyte | 1.38e-18 | 72 |
macrophage dendritic cell progenitor | 1.96e-18 | 61 |
hematopoietic lineage restricted progenitor cell | 6.86e-18 | 120 |
monopoietic cell | 1.91e-17 | 59 |
monocyte | 1.91e-17 | 59 |
monoblast | 1.91e-17 | 59 |
promonocyte | 1.91e-17 | 59 |
granulocyte monocyte progenitor cell | 9.96e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.49e-13 | 66 |
hematopoietic oligopotent progenitor cell | 9.71e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.71e-13 | 161 |
hematopoietic stem cell | 1.27e-12 | 168 |
mesenchymal cell | 5.66e-11 | 354 |
connective tissue cell | 8.45e-11 | 361 |
hematopoietic cell | 6.56e-10 | 177 |
myeloid cell | 1.49e-08 | 108 |
common myeloid progenitor | 1.49e-08 | 108 |
multi fate stem cell | 7.16e-08 | 427 |
somatic stem cell | 3.92e-07 | 433 |
stem cell | 8.52e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.20e-15 | 98 |
blood island | 3.20e-15 | 98 |
bone marrow | 4.71e-14 | 76 |
bone element | 1.01e-12 | 82 |
hemolymphoid system | 2.98e-12 | 108 |
skeletal element | 3.67e-12 | 90 |
skeletal system | 3.98e-12 | 100 |
connective tissue | 1.85e-11 | 371 |
immune system | 1.49e-10 | 93 |
regional part of cerebral cortex | 1.65e-10 | 22 |
neocortex | 7.72e-10 | 20 |
cerebral hemisphere | 5.37e-09 | 32 |
regional part of forebrain | 1.20e-08 | 41 |
forebrain | 1.20e-08 | 41 |
anterior neural tube | 1.20e-08 | 41 |
future forebrain | 1.20e-08 | 41 |
regional part of telencephalon | 6.08e-08 | 32 |
cerebral cortex | 7.02e-08 | 25 |
pallium | 7.02e-08 | 25 |
telencephalon | 9.20e-08 | 34 |
brain grey matter | 1.49e-07 | 34 |
gray matter | 1.49e-07 | 34 |
musculoskeletal system | 4.33e-07 | 167 |