FFCP PHASE1:Hg19::chr19:35657166..35657191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:35657166..35657191,+ | |||
|description=CAGE_peak_at_chr19:35657166..35657191,+ | |description=CAGE_peak_at_chr19:35657166..35657191,+ | ||
|id=chr19:35657166..35657191,+ | |id=chr19:35657166..35657191,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.85e-19!42;CL:0000860!1.73e-18!45;CL:0000557!8.45e-17!71;CL:0000839!1.14e-14!70;CL:0000766!4.94e-14!76;CL:0002009!9.18e-14!65;CL:0002194!2.38e-13!63;CL:0000576!2.38e-13!63;CL:0000040!2.38e-13!63;CL:0000559!2.38e-13!63;CL:0000003!1.45e-12!722;CL:0000144!3.87e-12!625;CL:0000134!3.98e-12!358;CL:0000034!4.07e-12!444;CL:0002320!4.14e-12!365;CL:0000763!2.49e-11!112;CL:0000049!2.49e-11!112;CL:0000048!3.07e-11!430;CL:0000063!3.26e-11!578;CL:0000723!4.90e-11!436;CL:0002031!8.60e-11!124;CL:0002371!1.79e-10!591;CL:0000738!1.41e-09!140;CL:0002087!2.84e-09!119;CL:0000219!4.11e-09!390;CL:0000012!4.16e-09!682;CL:0000037!4.18e-09!172;CL:0000566!4.18e-09!172;CL:0002032!4.46e-09!165;CL:0000837!4.46e-09!165;CL:0000548!2.97e-08!679;CL:0000004!2.97e-08!679;CL:0000255!2.97e-08!679;CL:0000988!4.39e-08!182 | |ontology_enrichment_celltype=CL:0002057!1.85e-19!42;CL:0000860!1.73e-18!45;CL:0000557!8.45e-17!71;CL:0000839!1.14e-14!70;CL:0000766!4.94e-14!76;CL:0002009!9.18e-14!65;CL:0002194!2.38e-13!63;CL:0000576!2.38e-13!63;CL:0000040!2.38e-13!63;CL:0000559!2.38e-13!63;CL:0000003!1.45e-12!722;CL:0000144!3.87e-12!625;CL:0000134!3.98e-12!358;CL:0000034!4.07e-12!444;CL:0002320!4.14e-12!365;CL:0000763!2.49e-11!112;CL:0000049!2.49e-11!112;CL:0000048!3.07e-11!430;CL:0000063!3.26e-11!578;CL:0000723!4.90e-11!436;CL:0002031!8.60e-11!124;CL:0002371!1.79e-10!591;CL:0000738!1.41e-09!140;CL:0002087!2.84e-09!119;CL:0000219!4.11e-09!390;CL:0000012!4.16e-09!682;CL:0000037!4.18e-09!172;CL:0000566!4.18e-09!172;CL:0002032!4.46e-09!165;CL:0000837!4.46e-09!165;CL:0000548!2.97e-08!679;CL:0000004!2.97e-08!679;CL:0000255!2.97e-08!679;CL:0000988!4.39e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.03e-28;33!CL:0002057;7.03e-28;33!CL:0000473;5.14e-24;39!CL:0000234;5.14e-24;39!CL:0000576;6.71e-15;48!CL:0000766;3.77e-13;69!CL:0000097;2.34e-08;5!CL:0000763;1.35e-07;100!CL:0002595;3.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.65e-29,48;CL:0000234,2.65e-29,48;CL:0000860,6.00e-28,42;CL:0002057,6.00e-28,42;CL:0000557,1.38e-27,67;CL:0000839,8.69e-27,66;CL:0000766,1.13e-24,72;CL:0002194,1.54e-22,59;CL:0000576,1.54e-22,59;CL:0000040,1.54e-22,59;CL:0000559,1.54e-22,59;CL:0002009,2.00e-21,61;CL:0000763,1.58e-16,108;CL:0000049,1.58e-16,108;CL:0002031,1.53e-13,120;CL:0000738,5.11e-11,136;CL:0002087,2.67e-10,115;CL:0002032,3.36e-10,161;CL:0000837,3.36e-10,161;CL:0000037,3.28e-09,168;CL:0000097,2.29e-08,5;CL:0002028,2.29e-08,5;CL:0000988,4.47e-08,177;CL:0000034,9.66e-08,441;CL:0000134,2.40e-07,354;CL:0000048,3.08e-07,427;CL:0002320,3.70e-07,361;CL:0002595,4.16e-07,5;CL:0000723,7.88e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.00e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.49e-17!80;UBERON:0003081!9.63e-16!216;UBERON:0001474!2.59e-15!86;UBERON:0004765!8.21e-14!101;UBERON:0001434!8.21e-14!101;UBERON:0002390!1.61e-13!102;UBERON:0003061!1.61e-13!102;UBERON:0002384!9.85e-12!375;UBERON:0002193!5.32e-11!112;UBERON:0002204!1.47e-09!167;UBERON:0002405!2.29e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;9.59e-10;7!UBERON:0003834;3.31e-07;5!UBERON:0001533;3.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.45e-26,76;UBERON:0001474,6.96e-25,82;UBERON:0004765,2.16e-22,90;UBERON:0001434,1.14e-20,100;UBERON:0002390,9.58e-20,98;UBERON:0003061,9.58e-20,98;UBERON:0002405,4.06e-19,93;UBERON:0003081,8.67e-19,203;UBERON:0002193,1.35e-16,108;UBERON:0002204,3.20e-15,167;UBERON:0000926,3.53e-13,315;UBERON:0004120,3.53e-13,315;UBERON:0006603,3.53e-13,315;UBERON:0003513,7.99e-10,7;UBERON:0003834,4.16e-07,5;UBERON:0001533,4.16e-07,5;UBERON:0002384,7.44e-07,371 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0.697801167972428,0.218441372130172,0.791300934685361,0.123766352960047,0.331397375727916,2.01697543935533,0,0,1.95173119516203,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.687720651731561,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,1.08371286321253,1.83884244895785,0.6024118375565,1.10926203050036,0.154934401160603,0,0.880801318004542,0.553995408531877,0.601633342410425,0.651032612147555,0,1.94336199611388,0.257575567634187,3.48955773070955,4.1566353805769,0.727752183563449,3.25400651667958,3.70051099219643,2.16794459626573,0.575384784644301,1.7931249457037,2.12834006899727,1.37898272294647,1.93645405075148,1.35426486594342,4.51781614902251,6.00393530127261,2.47195832889593,1.83650335422542,2.56743221660875,2.55734850319616,1.31940520074686,4.58766412529753,1.70489900213078,4.93355705668593,0.56738522469114,2.4912889959823,2.51248665256743,2.60741459210101,2.38907729175628,3.63239701580021,1.84138817993782,0.949387162322653,1.90129757680748,1.06302149982522,0.209658645508376,1.79725809834392,1.65194582125657,1.12507910687956,0.570025487482497,2.18808344918999,0.730656615058536,0,0,0,0.426730222566507,0.400395987036012,0,1.98313461835459,0,0,0,0.764546456250458,1.32171328579026,1.68152568894461,1.05353633910031,0.590129310341499,1.96505381374582,1.23360899399706,1.83905144929746,0.651844533267181,0.946895611469467,1.94826728407911,4.2335973616366,2.65145316727353,1.99380505125259,1.62482318259009,2.81800903396485,2.60118695119756,3.12432018746985,1.65810010671509,2.02862160014537,1.92772532110679,0.267540828089713,3.1360657141493,2.60611488204402,0.766440987203842,1.03088233644789,1.77113784413652,0.637130828648193,0.651083453856419,0.950452044448374,0.903450714466637,0.639933055772092,0,0.473554504088034,0.821127996921047,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0.361439152384566,0,0.869079113764942,3.9764297352555,0,0,0.221729397462564,0,0.196468613246569,0,0.741568885568859,0,0,0.398873881556595,0,0,0.371457501329565,0.596287222100115,0,0.347140501607594,0.56530794192401,2.93649605346934,2.20094433552054,1.8809546988313,0,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0.367663080345869,1.62028389576352,0.267899184852239,0,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0.872188104285069,0.496971951695318,0.759783069987479,0.264818361626438,2.0078563452417,0.709336764396714,0,1.06748995729705,0.98667019366864,0.311211035399766,0.269421344139376,0.326923806226917,0,0.576175924479999,0.234321431833797,1.24864030732128,0,0.448346041655403,0.117434498643765,0.485618833104395,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0,0,0.438977620880838,0.919463387397059,1.05166641234618,0.453728732640084,1.25572744982203,0.427114777637135,0.423863802319124,0.900273288253207,0.515262646192195,0.257640540045629,1.30281799432113,0.675105328965065,0.389748020644795,0.757301322732344,0.460249493211497,0.969876340912871,2.13005755509969,0,0.67824236924195,0.386521706326594,0.272746120590835,0.573609190778008,0.243947412259191,0.132529768321485,0.69716365721711,0.10366105501537,1.51392510525377,0.72995471815166,6.25798129319264,3.21620469096443,2.76269842704961,0.464367928031979,0,0.118306800039844,0.505754070234305,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.808987848960987,0.784885860501384,1.15424147083917,2.95262181849859,2.80483547606892,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.768251997860379,0,0.904760751704678,0.370353780634118,0.325808305310325,2.07986957055916,1.44331342025273,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.738651018262192,0,0.148631162288728,0,0.503946384596579,0.425325291727159,0.179117045405697,0,1.53353071666084,5.41929561685538,1.40877494421162,3.52457796419313,3.31475892859011,3.7872730027914,0.126995788584338,0.763976851116555,0,1.71072446022705,0.205654985406647,0.901029173531752,1.14330573052231,0.112131084345361,0,0.22001485746285,0.387815147273333,3.57656445851882,0.845302752556,0.26593811658487,0,1.02882949704857,0,1.0656887160644,0,1.08524321078289,0,0.325736184293735,0,1.58390374586686,2.71295439353627,1.74306691720059,0.499864955910285,3.64871341923571,4.01805673145701,12.6500363689819,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0.224170287987055,0.591092280605782,1.2937654491571,1.02674429023799,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0,0.623912584592421,1.07057393278297,0.946214490203608,0.702848489956279,0,4.5481500811197,0,0,0.368738337083406,0.695068915744663,0.391602314925481,0.343143423810856,0.206768026122887,0.862856803274467,0.960548020230999,1.5156378572313,0,1.81434175997808,0.496215615637554,0,0.561320188866147,0.640695746278505,0.511707249066704,0.321707842287215,1.48418066444991,0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| ||
|short_description=p@chr19:35657166..35657191,+ | |short_description=p@chr19:35657166..35657191,+ | ||
}} | }} |
Latest revision as of 06:35, 26 July 2015
Short description: | p@chr19:35657166..35657191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35657166..35657191, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.65e-29 | 48 |
phagocyte | 2.65e-29 | 48 |
classical monocyte | 6.00e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.00e-28 | 42 |
granulocyte monocyte progenitor cell | 1.38e-27 | 67 |
myeloid lineage restricted progenitor cell | 8.69e-27 | 66 |
myeloid leukocyte | 1.13e-24 | 72 |
monopoietic cell | 1.54e-22 | 59 |
monocyte | 1.54e-22 | 59 |
monoblast | 1.54e-22 | 59 |
promonocyte | 1.54e-22 | 59 |
macrophage dendritic cell progenitor | 2.00e-21 | 61 |
myeloid cell | 1.58e-16 | 108 |
common myeloid progenitor | 1.58e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.53e-13 | 120 |
leukocyte | 5.11e-11 | 136 |
nongranular leukocyte | 2.67e-10 | 115 |
hematopoietic oligopotent progenitor cell | 3.36e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.36e-10 | 161 |
hematopoietic stem cell | 3.28e-09 | 168 |
mast cell | 2.29e-08 | 5 |
basophil mast progenitor cell | 2.29e-08 | 5 |
hematopoietic cell | 4.47e-08 | 177 |
stem cell | 9.66e-08 | 441 |
mesenchymal cell | 2.40e-07 | 354 |
multi fate stem cell | 3.08e-07 | 427 |
connective tissue cell | 3.70e-07 | 361 |
smooth muscle cell of the subclavian artery | 4.16e-07 | 5 |
somatic stem cell | 7.88e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.45e-26 | 76 |
bone element | 6.96e-25 | 82 |
skeletal element | 2.16e-22 | 90 |
skeletal system | 1.14e-20 | 100 |
hematopoietic system | 9.58e-20 | 98 |
blood island | 9.58e-20 | 98 |
immune system | 4.06e-19 | 93 |
lateral plate mesoderm | 8.67e-19 | 203 |
hemolymphoid system | 1.35e-16 | 108 |
musculoskeletal system | 3.20e-15 | 167 |
mesoderm | 3.53e-13 | 315 |
mesoderm-derived structure | 3.53e-13 | 315 |
presumptive mesoderm | 3.53e-13 | 315 |
trunk blood vessel | 7.99e-10 | 7 |
thoracic segment blood vessel | 4.16e-07 | 5 |
subclavian artery | 4.16e-07 | 5 |
connective tissue | 7.44e-07 | 371 |