FFCP PHASE1:Hg19::chr11:126153435..126153444,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:126153435..126153444,-
|short_description=p@chr11:126153435..126153444,-
|description=CAGE_peak_at_chr11:126153435..126153444,-
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:126153435..126153444,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr11:126153435..126153444,- | |||
|id=chr11:126153435..126153444,- | |||
|ontology_enrichment_celltype=CL:0002057!3.70e-38!42;CL:0000860!1.07e-37!45;CL:0000738!5.00e-27!140;CL:0000766!5.58e-27!76;CL:0002009!2.76e-24!65;CL:0000037!1.30e-23!172;CL:0000566!1.30e-23!172;CL:0002031!4.52e-23!124;CL:0002087!4.81e-23!119;CL:0000557!6.35e-23!71;CL:0002194!9.57e-23!63;CL:0000576!9.57e-23!63;CL:0000040!9.57e-23!63;CL:0000559!9.57e-23!63;CL:0002032!1.28e-22!165;CL:0000837!1.28e-22!165;CL:0000839!4.88e-22!70;CL:0000988!1.00e-21!182;CL:0000763!3.81e-21!112;CL:0000049!3.81e-21!112;CL:0002393!4.60e-09!9;CL:0002397!4.60e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-63;33!CL:0002057;1.15e-63;33!CL:0000473;6.73e-47;39!CL:0000234;6.73e-47;39!CL:0000576;7.20e-46;48!CL:0000766;2.50e-33;69!CL:0000094;3.23e-17;8!CL:0000763;7.80e-17;100!CL:0000775;3.92e-13;3!CL:0000081;2.51e-12;11!CL:0000738;1.78e-11;136!CL:0002087;1.03e-10;104!CL:0002393;2.77e-10;6!CL:0002397;2.77e-10;6!CL:0001014;4.86e-08;2!CL:0001016;4.86e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.21e-84,42;CL:0002057,2.21e-84,42;CL:0000473,8.10e-73,48;CL:0000234,8.10e-73,48;CL:0000766,2.90e-66,72;CL:0002009,6.77e-62,61;CL:0002194,1.25e-56,59;CL:0000576,1.25e-56,59;CL:0000040,1.25e-56,59;CL:0000559,1.25e-56,59;CL:0000557,1.10e-55,67;CL:0000839,7.31e-50,66;CL:0000763,7.18e-49,108;CL:0000049,7.18e-49,108;CL:0000738,4.99e-39,136;CL:0002032,1.59e-31,161;CL:0000837,1.59e-31,161;CL:0000037,1.62e-31,168;CL:0002031,1.53e-29,120;CL:0000988,2.02e-29,177;CL:0002087,3.36e-29,115;CL:0000094,4.56e-17,8;CL:0002393,3.61e-14,9;CL:0002397,3.61e-14,9;CL:0000775,4.02e-13,3;CL:0000134,3.06e-12,354;CL:0000081,3.20e-12,11;CL:0002320,8.34e-12,361;CL:0000219,2.83e-10,386;CL:0000048,4.31e-09,427;CL:0000723,8.01e-09,433;CL:0000034,1.78e-08,441;CL:0001014,6.06e-08,2;CL:0001016,6.06e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-60;42!CL:0000049;4.28e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.55e-24!102;UBERON:0003061!7.55e-24!102;UBERON:0002193!3.73e-21!112;UBERON:0002371!6.48e-20!80;UBERON:0001474!5.14e-18!86;UBERON:0002405!2.52e-17!115;UBERON:0004765!1.58e-12!101;UBERON:0001434!1.58e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.75e-48,98;UBERON:0003061,2.75e-48,98;UBERON:0002371,3.50e-48,76;UBERON:0001474,4.37e-44,82;UBERON:0002193,5.31e-43,108;UBERON:0004765,1.82e-39,90;UBERON:0002405,6.17e-38,93;UBERON:0001434,1.01e-34,100;UBERON:0002204,7.32e-19,167;UBERON:0003081,1.16e-18,203;UBERON:0002384,3.27e-11,371;UBERON:0000926,1.35e-09,315;UBERON:0004120,1.35e-09,315;UBERON:0006603,1.35e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,5.90046415273356,0.383829398097213,1.08371286321253,0,0.30120591877825,0,0,0,0.293600439334847,4.43196326825502,3.81034450193269,1.73608696572681,0,0.32389366601898,0,3.78035420826868,0.755751887377619,2.18325655069035,1.85943229524548,0.822335776043652,1.54853185447552,0.28769239232215,2.56160706529101,0.945928919554341,1.03423704220986,2.5819387343353,4.06279459783025,2.44715041405386,3.0019676506363,0.224723484445085,1.83650335422542,0.641858054152187,1.27867425159808,2.63881040149373,2.59302754908121,1.70489900213078,2.90209238628584,1.70215567407342,0.622822248995575,1.7587406567972,2.08593167368081,1.52032191293582,4.84319602106695,3.31449872388808,3.79754864929061,0.633765858935825,0.637812899895131,1.04829322754188,4.38081661471331,3.00353785683013,3.53596290733576,1.14005097496499,1.39241674039363,0.730656615058536,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0.589211814949674,0.664601683750863,0.812411591295047,0,0,0,0.552700035571697,0,0.296573126324121,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,2.95394953340702,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0.591092280605782,0,0.77005821767849,0,0,0,0,0,5.24304916763028,11.966458368161,6.21623270154053,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.213455115606889,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,2.27858874869665,0.952927101831156,1.23408681925858,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.851692475380653,0,0,0,0,0,0,0,0,0,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0.409074730008619,0.369254416383208,0.311039587661807,0,0.358042349351218,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0.269604531922708,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.252746318513952,0.60129367765797,0.207376382794494,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0.290268993867255,0,0.246346371159628,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,1.16495949527454,0,0.164831716762333,0.13480708770837,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,1.1248694577575,1.5476039091159,0,0,0.709251365692784,0.314727528809989,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,1.27668251554036,0.544017803369474,0,0.306345576763462,0.327872630709804,0.157054096250234,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.457680136793847,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0.265729680626726,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,3.8220135030964,0.285906176706625,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0.883352102537187,0,0,0.307988420568741,0,0,0,0.397901550322736,0,0.11294608203896,0,0.603851374266694,0.0771741581079447,0,0,0,0.471353094203252,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0,0.215166616178029,0,0.325613074443898,0,0,0.0898252021065869,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,5.90046415273356,0.383829398097213,1.08371286321253,0,0.30120591877825,0,0,0,0.293600439334847,4.43196326825502,3.81034450193269,1.73608696572681,0,0.32389366601898,0,3.78035420826868,0.755751887377619,2.18325655069035,1.85943229524548,0.822335776043652,1.54853185447552,0.28769239232215,2.56160706529101,0.945928919554341,1.03423704220986,2.5819387343353,4.06279459783025,2.44715041405386,3.0019676506363,0.224723484445085,1.83650335422542,0.641858054152187,1.27867425159808,2.63881040149373,2.59302754908121,1.70489900213078,2.90209238628584,1.70215567407342,0.622822248995575,1.7587406567972,2.08593167368081,1.52032191293582,4.84319602106695,3.31449872388808,3.79754864929061,0.633765858935825,0.637812899895131,1.04829322754188,4.38081661471331,3.00353785683013,3.53596290733576,1.14005097496499,1.39241674039363,0.730656615058536,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0.589211814949674,0.664601683750863,0.812411591295047,0,0,0,0.552700035571697,0,0.296573126324121,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,2.95394953340702,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0.591092280605782,0,0.77005821767849,0,0,0,0,0,5.24304916763028,11.966458368161,6.21623270154053,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,0.213455115606889,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0.507447609232169,0,2.27858874869665,0.952927101831156,1.23408681925858,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.851692475380653,0,0,0,0,0,0,0,0,0,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0.409074730008619,0.369254416383208,0.311039587661807,0,0.358042349351218,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0.269604531922708,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.252746318513952,0.60129367765797,0.207376382794494,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0.290268993867255,0,0.246346371159628,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,1.16495949527454,0,0.164831716762333,0.13480708770837,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,1.1248694577575,1.5476039091159,0,0,0.709251365692784,0.314727528809989,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,1.27668251554036,0.544017803369474,0,0.306345576763462,0.327872630709804,0.157054096250234,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.457680136793847,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0.265729680626726,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,3.8220135030964,0.285906176706625,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0.883352102537187,0,0,0.307988420568741,0,0,0,0.397901550322736,0,0.11294608203896,0,0.603851374266694,0.0771741581079447,0,0,0,0.471353094203252,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0,0.215166616178029,0,0.325613074443898,0,0,0.0898252021065869,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr11:126153435..126153444,- | |||
}} | }} |
Latest revision as of 19:44, 23 July 2015
Short description: | p@chr11:126153435..126153444, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:126153435..126153444, - |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.75e-48 | 98 |
blood island | 2.75e-48 | 98 |
bone marrow | 3.50e-48 | 76 |
bone element | 4.37e-44 | 82 |
hemolymphoid system | 5.31e-43 | 108 |
skeletal element | 1.82e-39 | 90 |
immune system | 6.17e-38 | 93 |
skeletal system | 1.01e-34 | 100 |
musculoskeletal system | 7.32e-19 | 167 |
lateral plate mesoderm | 1.16e-18 | 203 |
connective tissue | 3.27e-11 | 371 |
mesoderm | 1.35e-09 | 315 |
mesoderm-derived structure | 1.35e-09 | 315 |
presumptive mesoderm | 1.35e-09 | 315 |