FFCP PHASE1:Hg19::chr14:96722152..96722166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=623 | |EntrezGene=623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1029 | |HGNC=1029 | ||
|TSSclassifier=strong | |||
|UniProt=P46663 | |UniProt=P46663 | ||
|association_with_transcript=0bp_to_ENST00000216629_5end | |association_with_transcript=0bp_to_ENST00000216629_5end | ||
|cluster_id=chr14:96722152..96722166,+ | |||
|coexpression_cluster_id=C3470 | |||
|description=CAGE_peak_4_at_BDKRB1_5end | |description=CAGE_peak_4_at_BDKRB1_5end | ||
|id=chr14:96722152..96722166,+ | |id=chr14:96722152..96722166,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.12e-20!180;CL:0000192!5.20e-19!42;CL:0000514!5.20e-19!42;CL:0000680!2.01e-17!57;CL:0000056!2.01e-17!57;CL:0000355!2.01e-17!57;CL:0000187!2.63e-17!54;CL:0000183!3.32e-15!59;CL:0000393!7.91e-15!60;CL:0000211!7.91e-15!60;CL:0000222!2.69e-13!119;CL:0000359!7.77e-12!32;CL:0000048!1.19e-10!430;CL:0000723!3.15e-10!436;CL:0000034!1.10e-09!444;CL:0000057!6.18e-09!75;CL:0002334!1.36e-08!12;CL:0000144!1.11e-07!625;CL:0000077!3.65e-07!19;CL:0002539!5.62e-07!10;CL:0002504!5.97e-07!3;CL:1000279!5.97e-07!3;CL:1000280!5.97e-07!3;CL:0002582!6.59e-07!3 | |ontology_enrichment_celltype=CL:0000055!1.12e-20!180;CL:0000192!5.20e-19!42;CL:0000514!5.20e-19!42;CL:0000680!2.01e-17!57;CL:0000056!2.01e-17!57;CL:0000355!2.01e-17!57;CL:0000187!2.63e-17!54;CL:0000183!3.32e-15!59;CL:0000393!7.91e-15!60;CL:0000211!7.91e-15!60;CL:0000222!2.69e-13!119;CL:0000359!7.77e-12!32;CL:0000048!1.19e-10!430;CL:0000723!3.15e-10!436;CL:0000034!1.10e-09!444;CL:0000057!6.18e-09!75;CL:0002334!1.36e-08!12;CL:0000144!1.11e-07!625;CL:0000077!3.65e-07!19;CL:0002539!5.62e-07!10;CL:0002504!5.97e-07!3;CL:1000279!5.97e-07!3;CL:1000280!5.97e-07!3;CL:0002582!6.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002593;3.08e-14;2!CL:0002595;8.46e-13;5!CL:0000192;5.88e-10;43!CL:0000359;2.56e-09;32!CL:0002599;2.27e-08;1!CL:0002568;5.77e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.32e-14,2;CL:0000192,7.99e-14,43;CL:0000514,7.99e-14,43;CL:0002595,1.02e-12,5;CL:0000187,1.94e-10,55;CL:0000680,8.19e-10,58;CL:0000056,8.19e-10,58;CL:0000355,8.19e-10,58;CL:0000222,1.49e-09,121;CL:0000359,2.25e-09,32;CL:0000393,3.01e-09,61;CL:0000211,3.01e-09,61;CL:0002599,2.04e-08,1;CL:0002568,2.71e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000514;5.88e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;3.08e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.37e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0001134!9.03e-16!61;UBERON:0002036!9.03e-16!61;UBERON:0003082!9.03e-16!61;UBERON:0002385!5.02e-15!63;UBERON:0001015!5.02e-15!63;UBERON:0000383!5.02e-15!63;UBERON:0004290!4.45e-14!70;UBERON:0000486!4.91e-12!82;UBERON:0000914!1.20e-11!83;UBERON:0002329!1.20e-11!83;UBERON:0003077!1.20e-11!83;UBERON:0003059!1.20e-11!83;UBERON:0007282!1.20e-11!83;UBERON:0009618!1.20e-11!83;UBERON:0007285!1.20e-11!83;UBERON:0001135!1.11e-09!15;UBERON:0001637!3.75e-09!42;UBERON:0003509!3.75e-09!42;UBERON:0004572!3.75e-09!42;UBERON:0004573!1.25e-08!33;UBERON:0004571!1.25e-08!33;UBERON:0005256!2.21e-08!143;UBERON:0000490!2.78e-08!138;UBERON:0002204!3.20e-07!167;UBERON:0004237!5.62e-07!10;UBERON:0004695!5.62e-07!10;UBERON:0002111!5.62e-07!10;UBERON:0004178!5.62e-07!10 | |ontology_enrichment_uberon=UBERON:0001134!9.03e-16!61;UBERON:0002036!9.03e-16!61;UBERON:0003082!9.03e-16!61;UBERON:0002385!5.02e-15!63;UBERON:0001015!5.02e-15!63;UBERON:0000383!5.02e-15!63;UBERON:0004290!4.45e-14!70;UBERON:0000486!4.91e-12!82;UBERON:0000914!1.20e-11!83;UBERON:0002329!1.20e-11!83;UBERON:0003077!1.20e-11!83;UBERON:0003059!1.20e-11!83;UBERON:0007282!1.20e-11!83;UBERON:0009618!1.20e-11!83;UBERON:0007285!1.20e-11!83;UBERON:0001135!1.11e-09!15;UBERON:0001637!3.75e-09!42;UBERON:0003509!3.75e-09!42;UBERON:0004572!3.75e-09!42;UBERON:0004573!1.25e-08!33;UBERON:0004571!1.25e-08!33;UBERON:0005256!2.21e-08!143;UBERON:0000490!2.78e-08!138;UBERON:0002204!3.20e-07!167;UBERON:0004237!5.62e-07!10;UBERON:0004695!5.62e-07!10;UBERON:0002111!5.62e-07!10;UBERON:0004178!5.62e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.08e-14;2!UBERON:0003834;8.46e-13;5!UBERON:0001533;8.46e-13;5!UBERON:0003513;2.77e-09;7!UBERON:0004573;1.39e-08;33!UBERON:0004571;1.39e-08;33!UBERON:0001135;3.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,4.32e-14,2;UBERON:0003834,1.02e-12,5;UBERON:0001533,1.02e-12,5;UBERON:0002329,2.17e-09,71;UBERON:0003059,2.17e-09,71;UBERON:0007282,2.17e-09,71;UBERON:0004290,2.17e-09,71;UBERON:0009618,2.17e-09,71;UBERON:0000486,2.37e-09,83;UBERON:0003077,3.12e-09,72;UBERON:0007285,3.12e-09,72;UBERON:0003513,3.16e-09,7;UBERON:0007524,4.43e-09,73;UBERON:0001134,4.51e-09,62;UBERON:0002036,4.51e-09,62;UBERON:0003082,4.51e-09,62;UBERON:0004573,4.58e-09,33;UBERON:0004571,4.58e-09,33;UBERON:0002385,9.78e-09,64;UBERON:0001015,9.78e-09,64;UBERON:0000383,9.78e-09,64;UBERON:0007503,2.25e-08,78;UBERON:0001135,3.80e-07,15;UBERON:0001637,6.05e-07,42;UBERON:0003509,6.05e-07,42;UBERON:0004572,6.05e-07,42;UBERON:0005256,8.39e-07,122 | |||
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| ||
|short_description=p4@BDKRB1 | |short_description=p4@BDKRB1 | ||
}} | }} |
Latest revision as of 20:06, 16 September 2015
Short description: | p4@BDKRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BDKRB1_5end |
Coexpression cluster: | C3470_Smooth_Mesothelial_mesothelioma_Synoviocyte_Prostate_normal_mesenchymal |
Association with transcript: | 0bp_to_ENST00000216629_5end |
EntrezGene: | BDKRB1 |
HGNC: | 1029 |
UniProt: | P46663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.32e-14 | 2 |
smooth muscle cell | 7.99e-14 | 43 |
smooth muscle myoblast | 7.99e-14 | 43 |
smooth muscle cell of the subclavian artery | 1.02e-12 | 5 |
muscle cell | 1.94e-10 | 55 |
muscle precursor cell | 8.19e-10 | 58 |
myoblast | 8.19e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.19e-10 | 58 |
mesodermal cell | 1.49e-09 | 121 |
vascular associated smooth muscle cell | 2.25e-09 | 32 |
electrically responsive cell | 3.01e-09 | 61 |
electrically active cell | 3.01e-09 | 61 |
smooth muscle cell of the esophagus | 2.04e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 4.32e-14 | 2 |
thoracic segment blood vessel | 1.02e-12 | 5 |
subclavian artery | 1.02e-12 | 5 |
somite | 2.17e-09 | 71 |
presomitic mesoderm | 2.17e-09 | 71 |
presumptive segmental plate | 2.17e-09 | 71 |
dermomyotome | 2.17e-09 | 71 |
trunk paraxial mesoderm | 2.17e-09 | 71 |
multilaminar epithelium | 2.37e-09 | 83 |
paraxial mesoderm | 3.12e-09 | 72 |
presumptive paraxial mesoderm | 3.12e-09 | 72 |
trunk blood vessel | 3.16e-09 | 7 |
dense mesenchyme tissue | 4.43e-09 | 73 |
skeletal muscle tissue | 4.51e-09 | 62 |
striated muscle tissue | 4.51e-09 | 62 |
myotome | 4.51e-09 | 62 |
systemic artery | 4.58e-09 | 33 |
systemic arterial system | 4.58e-09 | 33 |
muscle tissue | 9.78e-09 | 64 |
musculature | 9.78e-09 | 64 |
musculature of body | 9.78e-09 | 64 |
epithelial vesicle | 2.25e-08 | 78 |
smooth muscle tissue | 3.80e-07 | 15 |
artery | 6.05e-07 | 42 |
arterial blood vessel | 6.05e-07 | 42 |
arterial system | 6.05e-07 | 42 |
trunk mesenchyme | 8.39e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.37e-14 | 2 |