FFCP PHASE1:Hg19::chr14:99710252..99710256,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:99710252..99710256,- | |||
|description=CAGE_peak_at_chr14:99710252..99710256,- | |description=CAGE_peak_at_chr14:99710252..99710256,- | ||
|id=chr14:99710252..99710256,- | |id=chr14:99710252..99710256,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.65e-16;1!CL:0000911;1.65e-16;1!CL:0000814;1.65e-16;1!CL:0000084;2.17e-15;25!CL:0000791;2.33e-08;18!CL:0000789;2.33e-08;18!CL:0002419;2.33e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.41e-16,1;CL:0000914,1.41e-16,1;CL:0000911,1.41e-16,1;CL:0000814,1.41e-16,1;CL:0002042,1.41e-16,1;CL:0002039,1.41e-16,1;CL:0002040,1.41e-16,1;CL:0002041,1.41e-16,1;CL:0000084,2.45e-15,25;CL:0000827,2.45e-15,25;CL:0000838,2.32e-10,52;CL:0000542,3.69e-10,53;CL:0000051,3.69e-10,53;CL:0000893,5.94e-09,2;CL:0002489,5.94e-09,2;CL:0000809,5.94e-09,2;CL:0000808,5.94e-09,2;CL:0000894,5.94e-09,2;CL:0000806,5.94e-09,2;CL:0000807,5.94e-09,2;CL:0000805,5.94e-09,2;CL:0002425,5.94e-09,2;CL:0000791,2.27e-08,18;CL:0000789,2.27e-08,18;CL:0002420,2.27e-08,18;CL:0002419,2.27e-08,18;CL:0000790,2.27e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002425;6.42e-09;2!CL:0000790;2.33e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;6.42e-09;2!DOID:962;6.42e-09;2!DOID:171;5.26e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,8.09e-09,2;DOID:962,8.09e-09,2;DOID:171,5.43e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002020!3.34e-27!34;UBERON:0003528!3.34e-27!34;UBERON:0001893!3.84e-27!34;UBERON:0002780!9.43e-27!41;UBERON:0001890!9.43e-27!41;UBERON:0006240!9.43e-27!41;UBERON:0001869!5.42e-26!32;UBERON:0003080!5.45e-26!42;UBERON:0002791!2.56e-25!33;UBERON:0001049!2.00e-21!57;UBERON:0005068!2.00e-21!57;UBERON:0006241!2.00e-21!57;UBERON:0007135!2.00e-21!57;UBERON:0002619!1.27e-20!22;UBERON:0002616!1.69e-20!59;UBERON:0000956!7.57e-18!25;UBERON:0000203!7.57e-18!25;UBERON:0007023!1.02e-17!115;UBERON:0001950!1.95e-16!20;UBERON:0000955!2.40e-16!69;UBERON:0006238!2.40e-16!69;UBERON:0003056!3.12e-16!61;UBERON:0000073!2.56e-15!94;UBERON:0001016!2.56e-15!94;UBERON:0001017!3.65e-14!82;UBERON:0002346!4.48e-14!90;UBERON:0003075!1.45e-13!86;UBERON:0007284!1.45e-13!86;UBERON:0005743!3.11e-13!86;UBERON:0000153!1.70e-12!129;UBERON:0007811!1.70e-12!129;UBERON:0000369!3.29e-12!4;UBERON:0002435!3.29e-12!4;UBERON:0000204!3.29e-12!4;UBERON:0010082!3.29e-12!4;UBERON:0000200!2.14e-11!6;UBERON:0002420!2.55e-11!9;UBERON:0007245!2.55e-11!9;UBERON:0010009!2.55e-11!9;UBERON:0010011!2.55e-11!9;UBERON:0000454!2.55e-11!9;UBERON:0002308!3.76e-11!9;UBERON:0000125!3.76e-11!9;UBERON:0009663!1.76e-10!7;UBERON:0004177!4.75e-10!7;UBERON:0005383!7.99e-10!3;UBERON:0005382!7.99e-10!3;UBERON:0000349!1.65e-09!5;UBERON:0000033!2.68e-09!123;UBERON:0001871!1.05e-08!7;UBERON:0000924!3.02e-08!173;UBERON:0006601!3.02e-08!173;UBERON:0004121!8.27e-08!169;UBERON:0002370!2.34e-07!4;UBERON:0005058!2.34e-07!4;UBERON:0009113!2.34e-07!4;UBERON:0003295!2.34e-07!4;UBERON:0005562!2.34e-07!4;UBERON:0001873!3.00e-07!2;UBERON:0010122!3.00e-07!2;UBERON:0001954!6.14e-07!2;UBERON:0003022!6.14e-07!2;UBERON:0002421!6.14e-07!2;UBERON:0002600!6.14e-07!2 | |ontology_enrichment_uberon=UBERON:0002020!3.34e-27!34;UBERON:0003528!3.34e-27!34;UBERON:0001893!3.84e-27!34;UBERON:0002780!9.43e-27!41;UBERON:0001890!9.43e-27!41;UBERON:0006240!9.43e-27!41;UBERON:0001869!5.42e-26!32;UBERON:0003080!5.45e-26!42;UBERON:0002791!2.56e-25!33;UBERON:0001049!2.00e-21!57;UBERON:0005068!2.00e-21!57;UBERON:0006241!2.00e-21!57;UBERON:0007135!2.00e-21!57;UBERON:0002619!1.27e-20!22;UBERON:0002616!1.69e-20!59;UBERON:0000956!7.57e-18!25;UBERON:0000203!7.57e-18!25;UBERON:0007023!1.02e-17!115;UBERON:0001950!1.95e-16!20;UBERON:0000955!2.40e-16!69;UBERON:0006238!2.40e-16!69;UBERON:0003056!3.12e-16!61;UBERON:0000073!2.56e-15!94;UBERON:0001016!2.56e-15!94;UBERON:0001017!3.65e-14!82;UBERON:0002346!4.48e-14!90;UBERON:0003075!1.45e-13!86;UBERON:0007284!1.45e-13!86;UBERON:0005743!3.11e-13!86;UBERON:0000153!1.70e-12!129;UBERON:0007811!1.70e-12!129;UBERON:0000369!3.29e-12!4;UBERON:0002435!3.29e-12!4;UBERON:0000204!3.29e-12!4;UBERON:0010082!3.29e-12!4;UBERON:0000200!2.14e-11!6;UBERON:0002420!2.55e-11!9;UBERON:0007245!2.55e-11!9;UBERON:0010009!2.55e-11!9;UBERON:0010011!2.55e-11!9;UBERON:0000454!2.55e-11!9;UBERON:0002308!3.76e-11!9;UBERON:0000125!3.76e-11!9;UBERON:0009663!1.76e-10!7;UBERON:0004177!4.75e-10!7;UBERON:0005383!7.99e-10!3;UBERON:0005382!7.99e-10!3;UBERON:0000349!1.65e-09!5;UBERON:0000033!2.68e-09!123;UBERON:0001871!1.05e-08!7;UBERON:0000924!3.02e-08!173;UBERON:0006601!3.02e-08!173;UBERON:0004121!8.27e-08!169;UBERON:0002370!2.34e-07!4;UBERON:0005058!2.34e-07!4;UBERON:0009113!2.34e-07!4;UBERON:0003295!2.34e-07!4;UBERON:0005562!2.34e-07!4;UBERON:0001873!3.00e-07!2;UBERON:0010122!3.00e-07!2;UBERON:0001954!6.14e-07!2;UBERON:0003022!6.14e-07!2;UBERON:0002421!6.14e-07!2;UBERON:0002600!6.14e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.42e-09;2!UBERON:0003714;6.42e-09;2!UBERON:0005058;6.42e-09;2!UBERON:0009113;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.18e-16,4;UBERON:0005058,4.18e-16,4;UBERON:0009113,4.18e-16,4;UBERON:0003295,4.18e-16,4;UBERON:0005562,4.18e-16,4;UBERON:0003351,4.60e-11,6;UBERON:0004177,1.29e-09,7;UBERON:0005057,1.29e-09,7;UBERON:0003714,8.09e-09,2;UBERON:0000974,5.43e-07,10;UBERON:0003408,5.43e-07,10;UBERON:0001042,5.43e-07,10;UBERON:0009145,5.43e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13090517239049,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,5.21367853978076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0.431255149719035,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23571301227925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,1.13826949357463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04123229368278,0,0.885741385813839,0.844175070377856,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.471797825567689,0,0,0,1.36329340684902,1.11728983594649,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0,0.129177819672012,1.11734485732544,0,0,0.202117188958219,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13090517239049,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,5.21367853978076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0.431255149719035,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23571301227925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,1.13826949357463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04123229368278,0,0.885741385813839,0.844175070377856,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.471797825567689,0,0,0,1.36329340684902,1.11728983594649,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0,0.129177819672012,1.11734485732544,0,0,0.202117188958219,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr14:99710252..99710256,- | |short_description=p@chr14:99710252..99710256,- | ||
}} | }} |
Latest revision as of 00:11, 25 July 2015
Short description: | p@chr14:99710252..99710256, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:99710252..99710256, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.41e-16 | 1 |
immature NK T cell | 1.41e-16 | 1 |
effector T cell | 1.41e-16 | 1 |
mature NK T cell | 1.41e-16 | 1 |
immature NK T cell stage IV | 1.41e-16 | 1 |
immature NK T cell stage I | 1.41e-16 | 1 |
immature NK T cell stage II | 1.41e-16 | 1 |
immature NK T cell stage III | 1.41e-16 | 1 |
T cell | 2.45e-15 | 25 |
pro-T cell | 2.45e-15 | 25 |
lymphoid lineage restricted progenitor cell | 2.32e-10 | 52 |
lymphocyte | 3.69e-10 | 53 |
common lymphoid progenitor | 3.69e-10 | 53 |
thymocyte | 5.94e-09 | 2 |
double negative thymocyte | 5.94e-09 | 2 |
double-positive, alpha-beta thymocyte | 5.94e-09 | 2 |
DN4 thymocyte | 5.94e-09 | 2 |
DN1 thymic pro-T cell | 5.94e-09 | 2 |
DN2 thymocyte | 5.94e-09 | 2 |
DN3 thymocyte | 5.94e-09 | 2 |
immature single positive thymocyte | 5.94e-09 | 2 |
early T lineage precursor | 5.94e-09 | 2 |
mature alpha-beta T cell | 2.27e-08 | 18 |
alpha-beta T cell | 2.27e-08 | 18 |
immature T cell | 2.27e-08 | 18 |
mature T cell | 2.27e-08 | 18 |
immature alpha-beta T cell | 2.27e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.18e-16 | 4 |
hemolymphoid system gland | 4.18e-16 | 4 |
thymic region | 4.18e-16 | 4 |
pharyngeal gland | 4.18e-16 | 4 |
thymus primordium | 4.18e-16 | 4 |
pharyngeal epithelium | 4.60e-11 | 6 |
hemopoietic organ | 1.29e-09 | 7 |
immune organ | 1.29e-09 | 7 |
neural tissue | 8.09e-09 | 2 |
neck | 5.43e-07 | 10 |
gland of gut | 5.43e-07 | 10 |
chordate pharynx | 5.43e-07 | 10 |
pharyngeal region of foregut | 5.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 8.09e-09 | 2 |
neurofibroma | 8.09e-09 | 2 |
neuroectodermal tumor | 5.43e-07 | 10 |