FFCP PHASE1:Hg19::chr1:161275265..161275277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:161275265..161275277,- | |||
|coexpression_cluster_id=C291 | |||
|description=CAGE_peak_at_chr1:161275265..161275277,- | |description=CAGE_peak_at_chr1:161275265..161275277,- | ||
|id=chr1:161275265..161275277,- | |id=chr1:161275265..161275277,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.81e-40;1!UBERON:0006241;1.22e-14;3!UBERON:0003057;1.22e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-12!115;UBERON:0002240!2.53e-11!3;UBERON:0001896!3.55e-11!3;UBERON:0005290!3.55e-11!3;UBERON:0010096!3.55e-11!3;UBERON:0001723!8.46e-11!3;UBERON:0001033!8.46e-11!3;UBERON:0010056!8.46e-11!3;UBERON:0002298!1.86e-10!8;UBERON:0003076!2.91e-10!15;UBERON:0003057!2.91e-10!15;UBERON:0002081!2.88e-08!2;UBERON:0003127!4.22e-08!2;UBERON:0000341!5.35e-08!2;UBERON:0005743!1.24e-07!86;UBERON:0001017!3.66e-07!82;UBERON:0002360!4.67e-07!2;UBERON:0000094!4.67e-07!2;UBERON:0007645!4.67e-07!2;UBERON:0005174!6.27e-07!5;UBERON:0001137!6.27e-07!5;UBERON:0003075!6.73e-07!86;UBERON:0007284!6.73e-07!86;UBERON:0001049!7.61e-07!57;UBERON:0005068!7.61e-07!57;UBERON:0006241!7.61e-07!57;UBERON:0007135!7.61e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.81e-40;1!UBERON:0003127;5.15e-21;2!UBERON:0002081;5.15e-21;2!UBERON:0002240;1.22e-14;3!UBERON:0005174;1.22e-14;3!UBERON:0001137;1.22e-14;3!UBERON:0001896;1.71e-14;3!UBERON:0001723;1.71e-14;3!UBERON:0004151;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0005290;1.71e-14;3!UBERON:0002298;6.55e-08;6!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.48e-40,1;UBERON:0002081,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0003127,5.70e-21,2;UBERON:0002240,1.22e-14,3;UBERON:0005174,1.22e-14,3;UBERON:0001137,1.22e-14,3;UBERON:0001896,1.40e-14,3;UBERON:0005290,1.40e-14,3;UBERON:0010096,1.40e-14,3;UBERON:0004151,1.60e-14,3;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0003076,1.15e-11,15;UBERON:0003057,1.15e-11,15;UBERON:0003103,5.47e-10,68;UBERON:0002298,5.92e-08,6;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7 | |||
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| ||
|short_description=p@chr1:161275265..161275277,- | |short_description=p@chr1:161275265..161275277,- | ||
}} | }} |
Latest revision as of 23:36, 27 July 2015
Short description: | p@chr1:161275265..161275277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:161275265..161275277, - |
Coexpression cluster: | C291_spinal_substantia_retina_medulla_tongue_skeletal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.48e-40 | 1 |
cardiac atrium | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
open tracheal system trachea | 5.70e-21 | 2 |
spinal cord | 1.22e-14 | 3 |
dorsal region element | 1.22e-14 | 3 |
dorsum | 1.22e-14 | 3 |
medulla oblongata | 1.40e-14 | 3 |
myelencephalon | 1.40e-14 | 3 |
future myelencephalon | 1.40e-14 | 3 |
cardiac chamber | 1.60e-14 | 3 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
posterior neural tube | 1.15e-11 | 15 |
chordal neural plate | 1.15e-11 | 15 |
compound organ | 5.47e-10 | 68 |
brainstem | 5.92e-08 | 6 |
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |