FFCP PHASE1:Hg19::chr11:47396254..47396297,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:47396254..47396297,+
|short_description=p@chr11:47396254..47396297,+
|description=CAGE_peak_at_chr11:47396254..47396297,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:47396254..47396297,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:47396254..47396297,+ | |||
|id=chr11:47396254..47396297,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.42e-101!42;CL:0000860!1.66e-93!45;CL:0000766!1.12e-84!76;CL:0002009!2.99e-71!65;CL:0000557!1.15e-67!71;CL:0002194!3.75e-66!63;CL:0000576!3.75e-66!63;CL:0000040!3.75e-66!63;CL:0000559!3.75e-66!63;CL:0000738!1.14e-65!140;CL:0000839!1.00e-61!70;CL:0000763!3.27e-59!112;CL:0000049!3.27e-59!112;CL:0000037!4.30e-51!172;CL:0000566!4.30e-51!172;CL:0000988!1.40e-47!182;CL:0002087!1.62e-44!119;CL:0002032!1.48e-43!165;CL:0000837!1.48e-43!165;CL:0002031!3.44e-42!124;CL:0000094!3.56e-25!8;CL:0000081!6.67e-18!11;CL:0000134!9.52e-18!358;CL:0002320!3.74e-17!365;CL:0000219!4.66e-15!390;CL:0000048!2.44e-13!430;CL:0000034!2.84e-13!444;CL:0000723!5.70e-13!436;CL:0002393!3.90e-12!9;CL:0002397!3.90e-12!9;CL:0000775!2.47e-10!3;CL:0000767!3.17e-10!3;CL:0000842!5.74e-10!3;CL:0000784!2.86e-09!3;CL:0000771!4.63e-08!2;CL:0000224!1.42e-07!4;CL:0001014!2.36e-07!2;CL:0001016!2.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-83;33!CL:0002057;1.37e-83;33!CL:0000473;5.77e-57;39!CL:0000234;5.77e-57;39!CL:0000576;5.14e-50;48!CL:0000766;4.04e-38;69!CL:0000094;7.10e-34;8!CL:0000081;2.74e-24;11!CL:0000763;5.22e-17;100!CL:0002087;1.05e-13;104!CL:0000775;1.46e-13;3!CL:0000767;1.97e-13;3!CL:0000226;4.43e-13;3!CL:0000842;4.43e-13;3!CL:0002393;4.03e-12;6!CL:0002397;4.03e-12;6!CL:0000738;7.74e-12;136!CL:0000771;2.11e-10;2!CL:0001014;1.59e-09;2!CL:0001016;1.59e-09;2!CL:0000988;5.46e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.51e-93,42;CL:0002057,3.51e-93,42;CL:0000766,3.41e-83,72;CL:0000473,1.25e-80,48;CL:0000234,1.25e-80,48;CL:0002009,2.20e-69,61;CL:0002194,4.68e-63,59;CL:0000576,4.68e-63,59;CL:0000040,4.68e-63,59;CL:0000559,4.68e-63,59;CL:0000557,1.35e-62,67;CL:0000763,3.64e-59,108;CL:0000049,3.64e-59,108;CL:0000839,1.04e-55,66;CL:0000738,4.16e-53,136;CL:0000037,2.08e-41,168;CL:0000988,7.13e-39,177;CL:0002032,5.04e-37,161;CL:0000837,5.04e-37,161;CL:0002087,8.28e-36,115;CL:0000094,7.42e-34,8;CL:0002031,7.43e-32,120;CL:0000081,2.82e-24,11;CL:0000134,4.53e-15,354;CL:0002320,1.32e-14,361;CL:0000775,1.52e-13,3;CL:0000767,2.15e-13,3;CL:0000226,4.83e-13,3;CL:0000842,4.83e-13,3;CL:0000219,5.79e-13,386;CL:0000034,5.73e-12,441;CL:0000048,8.57e-12,427;CL:0000723,1.67e-11,433;CL:0000771,1.93e-10,2;CL:0001014,1.77e-09,2;CL:0001016,1.77e-09,2;CL:0002393,4.65e-08,9;CL:0002397,4.65e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-67;42!CL:0000049;7.76e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.29e-59!80;UBERON:0001474!4.16e-54!86;UBERON:0002390!4.66e-54!102;UBERON:0003061!4.66e-54!102;UBERON:0002193!3.03e-48!112;UBERON:0004765!1.53e-44!101;UBERON:0001434!1.53e-44!101;UBERON:0002405!7.51e-38!115;UBERON:0002204!8.42e-23!167;UBERON:0003081!9.56e-21!216;UBERON:0002384!2.42e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.15e-54,76;UBERON:0001474,6.49e-50,82;UBERON:0002390,4.07e-49,98;UBERON:0003061,4.07e-49,98;UBERON:0004765,7.37e-45,90;UBERON:0002193,7.06e-44,108;UBERON:0002405,3.48e-43,93;UBERON:0001434,1.15e-39,100;UBERON:0002204,7.99e-21,167;UBERON:0003081,1.04e-19,203;UBERON:0002384,5.72e-14,371;UBERON:0000926,6.72e-10,315;UBERON:0004120,6.72e-10,315;UBERON:0006603,6.72e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08055698328027,2.30297638858328,7.1215416725395,0,0,0,0,0,0,21.0518255242113,21.257711431835,10.199510923645,0,0,0,0.726991193897824,0.377875943688809,1.4555043671269,3.95129362739664,4.11167888021826,8.981484755958,7.76769459269806,7.17249978281482,10.4052181150977,11.0318617835718,15.4916324060118,27.0852973188684,3.9530891303947,3.0019676506363,6.51698104890745,19.2832852193669,11.2325159476633,14.7047538933779,0.329851300186716,1.39624560335142,1.70489900213078,25.828622237944,11.9150897185139,16.8162007228805,4.27122730936464,3.65038042894141,4.99534342821768,12.7133895553007,15.4676607114777,15.5066569846033,0.211255286311942,1.06302149982522,0.628975936525128,0,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.513372145118994,0,1.30139853857622,0,0,0,8.23907726341901,5.9832291840805,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.09856981555372,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,12.3808312729272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08055698328027,2.30297638858328,7.1215416725395,0,0,0,0,0,0,21.0518255242113,21.257711431835,10.199510923645,0,0,0,0.726991193897824,0.377875943688809,1.4555043671269,3.95129362739664,4.11167888021826,8.981484755958,7.76769459269806,7.17249978281482,10.4052181150977,11.0318617835718,15.4916324060118,27.0852973188684,3.9530891303947,3.0019676506363,6.51698104890745,19.2832852193669,11.2325159476633,14.7047538933779,0.329851300186716,1.39624560335142,1.70489900213078,25.828622237944,11.9150897185139,16.8162007228805,4.27122730936464,3.65038042894141,4.99534342821768,12.7133895553007,15.4676607114777,15.5066569846033,0.211255286311942,1.06302149982522,0.628975936525128,0,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.513372145118994,0,1.30139853857622,0,0,0,8.23907726341901,5.9832291840805,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.09856981555372,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,12.3808312729272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:47396254..47396297,+ | |||
}} | }} |
Latest revision as of 22:36, 23 July 2015
Short description: | p@chr11:47396254..47396297, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47396254..47396297, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.15e-54 | 76 |
bone element | 6.49e-50 | 82 |
hematopoietic system | 4.07e-49 | 98 |
blood island | 4.07e-49 | 98 |
skeletal element | 7.37e-45 | 90 |
hemolymphoid system | 7.06e-44 | 108 |
immune system | 3.48e-43 | 93 |
skeletal system | 1.15e-39 | 100 |
musculoskeletal system | 7.99e-21 | 167 |
lateral plate mesoderm | 1.04e-19 | 203 |
connective tissue | 5.72e-14 | 371 |
mesoderm | 6.72e-10 | 315 |
mesoderm-derived structure | 6.72e-10 | 315 |
presumptive mesoderm | 6.72e-10 | 315 |