FFCP PHASE1:Hg19::chr11:60712008..60712039,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:60712008..60712039,-
|short_description=p@chr11:60712008..60712039,-
|description=CAGE_peak_at_chr11:60712008..60712039,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60712008..60712039,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr11:60712008..60712039,- | |||
|id=chr11:60712008..60712039,- | |||
|ontology_enrichment_celltype=CL:0000990!1.13e-28!8;CL:0000763!1.09e-26!112;CL:0000049!1.09e-26!112;CL:0000766!4.05e-26!76;CL:0002009!1.48e-23!65;CL:0000451!3.33e-23!10;CL:0000738!6.03e-23!140;CL:0002057!6.70e-23!42;CL:0000453!1.92e-21!5;CL:0000988!3.63e-21!182;CL:0000557!3.89e-21!71;CL:0000860!4.25e-21!45;CL:0002032!1.13e-19!165;CL:0000837!1.13e-19!165;CL:0002194!1.17e-19!63;CL:0000576!1.17e-19!63;CL:0000040!1.17e-19!63;CL:0000559!1.17e-19!63;CL:0000037!1.50e-18!172;CL:0000566!1.50e-18!172;CL:0000839!3.08e-17!70;CL:0000840!5.48e-17!5;CL:0001029!5.48e-17!5;CL:0002031!2.06e-13!124;CL:0000081!3.41e-13!11;CL:0000094!5.83e-13!8;CL:0002087!1.63e-11!119;CL:0000771!1.36e-09!2;CL:0001014!1.97e-09!2;CL:0001016!1.97e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000453;5.50e-64;5!CL:0000771;3.32e-40;2!CL:0000094;1.58e-39;8!CL:0000990;7.65e-36;8!CL:0000451;1.97e-29;10!CL:0000081;6.53e-29;11!CL:0000775;4.35e-27;3!CL:0001014;3.18e-11;2!CL:0001016;3.18e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.07e-64,5;CL:0000771,2.46e-40,2;CL:0000094,1.43e-39,8;CL:0000990,7.32e-36,8;CL:0000451,1.90e-29,10;CL:0000081,6.08e-29,11;CL:0000775,4.65e-27,3;CL:0000763,2.48e-11,108;CL:0000049,2.48e-11,108;CL:0001014,3.02e-11,2;CL:0001016,3.02e-11,2;CL:0000738,6.25e-09,136;CL:0002032,1.76e-07,161;CL:0000837,1.76e-07,161;CL:0000037,3.77e-07,168;CL:0000988,9.21e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.77e-25!102;UBERON:0003061!3.77e-25!102;UBERON:0002193!4.06e-24!112;UBERON:0002405!3.36e-18!115;UBERON:0002371!3.50e-18!80;UBERON:0001474!1.48e-16!86;UBERON:0004765!2.44e-13!101;UBERON:0001434!2.44e-13!101;UBERON:0004177!2.43e-09!7;UBERON:0003081!3.47e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.32e-40;2!UBERON:0005058;3.32e-40;2!UBERON:0009113;3.32e-40;2!UBERON:0004177;9.18e-17;5!UBERON:0005057;9.18e-17;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.28e-20,4;UBERON:0005058,1.28e-20,4;UBERON:0009113,1.28e-20,4;UBERON:0003295,1.28e-20,4;UBERON:0005562,1.28e-20,4;UBERON:0003351,4.24e-14,6;UBERON:0004177,3.15e-12,7;UBERON:0005057,3.15e-12,7;UBERON:0000974,7.66e-09,10;UBERON:0003408,7.66e-09,10;UBERON:0001042,7.66e-09,10;UBERON:0009145,7.66e-09,10;UBERON:0006562,4.04e-08,11;UBERON:0009722,4.04e-08,11;UBERON:0007690,4.04e-08,11 | |||
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| ||
|short_description=p@chr11:60712008..60712039,- | |||
}} | }} |
Latest revision as of 23:19, 23 July 2015
Short description: | p@chr11:60712008..60712039, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60712008..60712039, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.07e-64 | 5 |
eosinophil | 2.46e-40 | 2 |
granulocyte | 1.43e-39 | 8 |
conventional dendritic cell | 7.32e-36 | 8 |
dendritic cell | 1.90e-29 | 10 |
blood cell | 6.08e-29 | 11 |
neutrophil | 4.65e-27 | 3 |
myeloid cell | 2.48e-11 | 108 |
common myeloid progenitor | 2.48e-11 | 108 |
CD1a-positive Langerhans cell | 3.02e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.02e-11 | 2 |
leukocyte | 6.25e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.76e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-07 | 161 |
hematopoietic stem cell | 3.77e-07 | 168 |
hematopoietic cell | 9.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.28e-20 | 4 |
hemolymphoid system gland | 1.28e-20 | 4 |
thymic region | 1.28e-20 | 4 |
pharyngeal gland | 1.28e-20 | 4 |
thymus primordium | 1.28e-20 | 4 |
pharyngeal epithelium | 4.24e-14 | 6 |
hemopoietic organ | 3.15e-12 | 7 |
immune organ | 3.15e-12 | 7 |
neck | 7.66e-09 | 10 |
gland of gut | 7.66e-09 | 10 |
chordate pharynx | 7.66e-09 | 10 |
pharyngeal region of foregut | 7.66e-09 | 10 |
pharynx | 4.04e-08 | 11 |
entire pharyngeal arch endoderm | 4.04e-08 | 11 |
early pharyngeal endoderm | 4.04e-08 | 11 |