FFCP PHASE1:Hg19::chr16:57126555..57126564,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221184 | |EntrezGene=221184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2315 | |HGNC=2315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000535318_5end | |association_with_transcript=32bp_to_ENST00000535318_5end | ||
|cluster_id=chr16:57126555..57126564,+ | |||
|description=CAGE_peak_4_at_CPNE2_5end | |description=CAGE_peak_4_at_CPNE2_5end | ||
|id=chr16:57126555..57126564,+ | |id=chr16:57126555..57126564,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-11;2!CL:0002545;3.02e-11;2!CL:0000307;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,2.47e-11,2;CL:0000068,7.26e-08,3;CL:0000069,7.26e-08,3;CL:0000307,7.26e-08,3;CL:0000377,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-21;1!UBERON:0003056;4.52e-08;3!CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.23e-20!57;UBERON:0005068!5.23e-20!57;UBERON:0006241!5.23e-20!57;UBERON:0007135!5.23e-20!57;UBERON:0001017!2.84e-18!82;UBERON:0005743!1.68e-17!86;UBERON:0000955!8.03e-16!69;UBERON:0006238!8.03e-16!69;UBERON:0002616!8.07e-16!59;UBERON:0000073!1.67e-15!94;UBERON:0001016!1.67e-15!94;UBERON:0001893!2.35e-15!34;UBERON:0002020!7.05e-15!34;UBERON:0003528!7.05e-15!34;UBERON:0003075!1.73e-14!86;UBERON:0007284!1.73e-14!86;UBERON:0002791!2.28e-14!33;UBERON:0002780!3.97e-14!41;UBERON:0001890!3.97e-14!41;UBERON:0006240!3.97e-14!41;UBERON:0003080!1.38e-13!42;UBERON:0001869!1.67e-13!32;UBERON:0002346!3.11e-13!90;UBERON:0000025!2.13e-11!194;UBERON:0007023!9.36e-11!115;UBERON:0000956!1.98e-10!25;UBERON:0000203!1.98e-10!25;UBERON:0000477!7.09e-10!286;UBERON:0002619!7.54e-10!22;UBERON:0004111!2.93e-09!241;UBERON:0000033!6.98e-09!123;UBERON:0003056!7.57e-09!61;UBERON:0000153!2.07e-08!129;UBERON:0007811!2.07e-08!129;UBERON:0001950!2.15e-08!20;UBERON:0003076!7.70e-08!15;UBERON:0003057!7.70e-08!15;UBERON:0004121!1.78e-07!169;UBERON:0002298!4.55e-07!8;UBERON:0000924!5.63e-07!173;UBERON:0006601!5.63e-07!173 | |ontology_enrichment_uberon=UBERON:0001049!5.23e-20!57;UBERON:0005068!5.23e-20!57;UBERON:0006241!5.23e-20!57;UBERON:0007135!5.23e-20!57;UBERON:0001017!2.84e-18!82;UBERON:0005743!1.68e-17!86;UBERON:0000955!8.03e-16!69;UBERON:0006238!8.03e-16!69;UBERON:0002616!8.07e-16!59;UBERON:0000073!1.67e-15!94;UBERON:0001016!1.67e-15!94;UBERON:0001893!2.35e-15!34;UBERON:0002020!7.05e-15!34;UBERON:0003528!7.05e-15!34;UBERON:0003075!1.73e-14!86;UBERON:0007284!1.73e-14!86;UBERON:0002791!2.28e-14!33;UBERON:0002780!3.97e-14!41;UBERON:0001890!3.97e-14!41;UBERON:0006240!3.97e-14!41;UBERON:0003080!1.38e-13!42;UBERON:0001869!1.67e-13!32;UBERON:0002346!3.11e-13!90;UBERON:0000025!2.13e-11!194;UBERON:0007023!9.36e-11!115;UBERON:0000956!1.98e-10!25;UBERON:0000203!1.98e-10!25;UBERON:0000477!7.09e-10!286;UBERON:0002619!7.54e-10!22;UBERON:0004111!2.93e-09!241;UBERON:0000033!6.98e-09!123;UBERON:0003056!7.57e-09!61;UBERON:0000153!2.07e-08!129;UBERON:0007811!2.07e-08!129;UBERON:0001950!2.15e-08!20;UBERON:0003076!7.70e-08!15;UBERON:0003057!7.70e-08!15;UBERON:0004121!1.78e-07!169;UBERON:0002298!4.55e-07!8;UBERON:0000924!5.63e-07!173;UBERON:0006601!5.63e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;8.95e-41;2!UBERON:0000122;8.95e-41;2!UBERON:0000941;1.53e-21;1!UBERON:0001785;1.53e-21;1!UBERON:0002464;1.53e-21;1!UBERON:0004904;1.53e-21;1!UBERON:0001021;1.53e-21;1!UBERON:0002022;4.22e-21;1!UBERON:0002336;4.22e-21;1!UBERON:0011215;4.22e-21;1!UBERON:0001018;4.22e-21;1!UBERON:0002473;4.22e-21;1!UBERON:0005340;4.22e-21;1!UBERON:0003544;4.22e-21;1!UBERON:0005970;4.22e-21;1!UBERON:0002316;4.22e-21;1!UBERON:0001020;4.22e-21;1!UBERON:0002437;4.22e-21;1!UBERON:0003714;1.82e-11;2!UBERON:0002148;3.02e-11;2!UBERON:0005800;3.02e-11;2!UBERON:0006331;3.02e-11;2!UBERON:0009662;3.02e-11;2!UBERON:0001515;3.02e-11;2!UBERON:0000988;6.34e-08;3!UBERON:0004732;4.13e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,4.89e-41,2;UBERON:0000122,4.89e-41,2;UBERON:0000941,1.53e-21,1;UBERON:0001785,1.53e-21,1;UBERON:0002464,1.53e-21,1;UBERON:0004904,1.53e-21,1;UBERON:0001021,1.53e-21,1;UBERON:0003902,1.53e-21,1;UBERON:0005425,1.53e-21,1;UBERON:0002336,2.30e-21,1;UBERON:0011215,2.30e-21,1;UBERON:0001018,2.30e-21,1;UBERON:0002473,2.30e-21,1;UBERON:0005340,2.30e-21,1;UBERON:0003544,2.30e-21,1;UBERON:0005970,2.30e-21,1;UBERON:0002316,2.30e-21,1;UBERON:0001020,2.30e-21,1;UBERON:0002437,2.30e-21,1;UBERON:0002022,5.16e-21,1;UBERON:0003714,1.82e-11,2;UBERON:0005800,2.47e-11,2;UBERON:0001515,2.47e-11,2;UBERON:0002148,4.09e-11,2;UBERON:0006331,4.09e-11,2;UBERON:0009662,4.09e-11,2;UBERON:0000988,7.76e-08,3;UBERON:0001016,1.10e-07,89;UBERON:0004732,4.52e-07,13 | |||
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| ||
|short_description=p4@CPNE2 | |short_description=p4@CPNE2 | ||
}} | }} |
Latest revision as of 02:53, 17 September 2015
Short description: | p4@CPNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CPNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000535318_5end |
EntrezGene: | CPNE2 |
HGNC: | 2315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 2.47e-11 | 2 |
duct epithelial cell | 7.26e-08 | 3 |
branched duct epithelial cell | 7.26e-08 | 3 |
tracheal epithelial cell | 7.26e-08 | 3 |
tracheoblast | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 4.89e-41 | 2 |
neuron projection bundle | 4.89e-41 | 2 |
cranial nerve II | 1.53e-21 | 1 |
cranial nerve | 1.53e-21 | 1 |
nerve trunk | 1.53e-21 | 1 |
nerve connecting eye with brain | 1.53e-21 | 1 |
nerve | 1.53e-21 | 1 |
retinal neural layer | 1.53e-21 | 1 |
presumptive neural retina | 1.53e-21 | 1 |
corpus callosum | 2.30e-21 | 1 |
central nervous system cell part cluster | 2.30e-21 | 1 |
axon tract | 2.30e-21 | 1 |
intercerebral commissure | 2.30e-21 | 1 |
dorsal telencephalic commissure | 2.30e-21 | 1 |
brain white matter | 2.30e-21 | 1 |
brain commissure | 2.30e-21 | 1 |
white matter | 2.30e-21 | 1 |
nervous system commissure | 2.30e-21 | 1 |
cerebral hemisphere white matter | 2.30e-21 | 1 |
insula | 5.16e-21 | 1 |
neural tissue | 1.82e-11 | 2 |
segment of aorta | 2.47e-11 | 2 |
thoracic aorta | 2.47e-11 | 2 |
locus ceruleus | 4.09e-11 | 2 |
brainstem nucleus | 4.09e-11 | 2 |
hindbrain nucleus | 4.09e-11 | 2 |
pons | 7.76e-08 | 3 |
nervous system | 1.10e-07 | 89 |
segmental subdivision of nervous system | 4.52e-07 | 13 |