FFCP PHASE1:Hg19::chr16:57397653..57397690,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:57397653..57397690,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr16:57397653..57397690,+ | |description=CAGE_peak_at_chr16:57397653..57397690,+ | ||
|id=chr16:57397653..57397690,+ | |id=chr16:57397653..57397690,+ | ||
|ontology_enrichment_celltype=CL:0000990!6.35e-26!8;CL:0000451!6.25e-21!10;CL:0000453!5.84e-19!5;CL:0000840!1.14e-15!5;CL:0001029!1.14e-15!5;CL:0000738!4.38e-15!140;CL:0002031!1.77e-12!124;CL:0002032!1.10e-11!165;CL:0000837!1.10e-11!165;CL:0000037!6.44e-11!172;CL:0000566!6.44e-11!172;CL:0002087!7.15e-11!119;CL:0000988!6.33e-10!182;CL:0000235!7.81e-09!10;CL:0000557!1.18e-08!71;CL:0002009!1.57e-08!65;CL:0001014!1.84e-08!2;CL:0001016!1.84e-08!2;CL:0000945!2.93e-08!24;CL:0000826!2.93e-08!24 | |ontology_enrichment_celltype=CL:0000990!6.35e-26!8;CL:0000451!6.25e-21!10;CL:0000453!5.84e-19!5;CL:0000840!1.14e-15!5;CL:0001029!1.14e-15!5;CL:0000738!4.38e-15!140;CL:0002031!1.77e-12!124;CL:0002032!1.10e-11!165;CL:0000837!1.10e-11!165;CL:0000037!6.44e-11!172;CL:0000566!6.44e-11!172;CL:0002087!7.15e-11!119;CL:0000988!6.33e-10!182;CL:0000235!7.81e-09!10;CL:0000557!1.18e-08!71;CL:0002009!1.57e-08!65;CL:0001014!1.84e-08!2;CL:0001016!1.84e-08!2;CL:0000945!2.93e-08!24;CL:0000826!2.93e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.35e-55;8!CL:0000451;2.56e-45;10!CL:0000453;1.05e-39;5!CL:0000840;6.04e-33;5!CL:0000235;6.53e-21;6!CL:0001014;1.22e-16;2!CL:0001016;1.22e-16;2!CL:0000945;8.69e-15;24!CL:0000946;9.53e-09;1!CL:0000786;9.53e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.30e-55,8;CL:0000451,2.49e-45,10;CL:0000453,1.01e-39,5;CL:0000840,5.85e-33,5;CL:0001029,5.85e-33,5;CL:0000738,2.42e-21,136;CL:0000235,7.06e-21,6;CL:0002032,1.78e-17,161;CL:0000837,1.78e-17,161;CL:0002031,2.24e-17,120;CL:0001014,1.17e-16,2;CL:0001016,1.17e-16,2;CL:0000037,1.34e-16,168;CL:0000988,1.43e-15,177;CL:0000945,9.07e-15,24;CL:0000826,9.07e-15,24;CL:0002087,4.73e-14,115;CL:0000838,1.61e-10,52;CL:0000542,2.69e-10,53;CL:0000051,2.69e-10,53;CL:0002009,6.99e-09,61;CL:0000946,1.16e-08,1;CL:0000786,1.16e-08,1;CL:0000980,1.16e-08,1;CL:0000763,2.72e-08,108;CL:0000049,2.72e-08,108;CL:0000557,5.60e-08,67 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.53e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;4.72e-09;1!DOID:0050177;4.72e-09;1!DOID:0050427;4.72e-09;1!DOID:0060060;5.75e-09;1!DOID:0060061;5.75e-09;1!DOID:8691;5.75e-09;1!DOID:0060058;2.59e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.91e-09,1;DOID:0050177,4.91e-09,1;DOID:0050427,4.91e-09,1;DOID:0060060,6.22e-09,1;DOID:0060061,6.22e-09,1;DOID:8691,6.22e-09,1;DOID:0060058,2.50e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.94e-12!7;UBERON:0002106!1.30e-10!3;UBERON:0004854!1.30e-10!3;UBERON:0009034!1.30e-10!3;UBERON:0002095!1.30e-10!3;UBERON:0004782!1.30e-10!3;UBERON:0003281!1.30e-10!3;UBERON:0009664!1.30e-10!3;UBERON:0002296!1.30e-10!3;UBERON:0005602!1.30e-10!3;UBERON:0001179!1.30e-10!3;UBERON:0006293!1.30e-10!3;UBERON:0002193!1.92e-10!112;UBERON:0002405!4.97e-10!115;UBERON:0002390!1.23e-09!102;UBERON:0003061!1.23e-09!102;UBERON:0002371!2.70e-07!80;UBERON:0000945!7.06e-07!8;UBERON:0010039!7.06e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;9.53e-09;1!UBERON:0001154;9.53e-09;1!UBERON:0001153;9.53e-09;1!UBERON:0009854;9.53e-09;1!UBERON:0004177;6.66e-07;5!UBERON:0005057;6.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,9.74e-10,93;UBERON:0000029,9.17e-09,1;UBERON:0001154,9.91e-09,1;UBERON:0001153,9.91e-09,1;UBERON:0001045,9.91e-09,1;UBERON:0002193,4.13e-08,108;UBERON:0002390,1.26e-07,98;UBERON:0003061,1.26e-07,98;UBERON:0002371,6.90e-07,76 | |||
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| ||
|short_description=p@chr16:57397653..57397690,+ | |short_description=p@chr16:57397653..57397690,+ | ||
}} | }} |
Latest revision as of 10:32, 25 July 2015
Short description: | p@chr16:57397653..57397690, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57397653..57397690, + |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.30e-55 | 8 |
dendritic cell | 2.49e-45 | 10 |
Langerhans cell | 1.01e-39 | 5 |
immature conventional dendritic cell | 5.85e-33 | 5 |
common dendritic progenitor | 5.85e-33 | 5 |
leukocyte | 2.42e-21 | 136 |
macrophage | 7.06e-21 | 6 |
hematopoietic oligopotent progenitor cell | 1.78e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 2.24e-17 | 120 |
CD1a-positive Langerhans cell | 1.17e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.17e-16 | 2 |
hematopoietic stem cell | 1.34e-16 | 168 |
hematopoietic cell | 1.43e-15 | 177 |
lymphocyte of B lineage | 9.07e-15 | 24 |
pro-B cell | 9.07e-15 | 24 |
nongranular leukocyte | 4.73e-14 | 115 |
lymphoid lineage restricted progenitor cell | 1.61e-10 | 52 |
lymphocyte | 2.69e-10 | 53 |
common lymphoid progenitor | 2.69e-10 | 53 |
macrophage dendritic cell progenitor | 6.99e-09 | 61 |
antibody secreting cell | 1.16e-08 | 1 |
plasma cell | 1.16e-08 | 1 |
plasmablast | 1.16e-08 | 1 |
myeloid cell | 2.72e-08 | 108 |
common myeloid progenitor | 2.72e-08 | 108 |
granulocyte monocyte progenitor cell | 5.60e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
immune system | 9.74e-10 | 93 |
lymph node | 9.17e-09 | 1 |
vermiform appendix | 9.91e-09 | 1 |
caecum | 9.91e-09 | 1 |
midgut | 9.91e-09 | 1 |
hemolymphoid system | 4.13e-08 | 108 |
hematopoietic system | 1.26e-07 | 98 |
blood island | 1.26e-07 | 98 |
bone marrow | 6.90e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.91e-09 | 1 |
monogenic disease | 4.91e-09 | 1 |
xeroderma pigmentosum | 4.91e-09 | 1 |
non-Hodgkin lymphoma | 6.22e-09 | 1 |
cutaneous T cell lymphoma | 6.22e-09 | 1 |
mycosis fungoides | 6.22e-09 | 1 |
lymphoma | 2.50e-07 | 10 |