FFCP PHASE1:Hg19::chr20:54987220..54987233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57091 | |EntrezGene=57091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15878 | |HGNC=15878 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ75,B4DII4 | |UniProt=Q9NQ75,B4DII4 | ||
|association_with_transcript=52bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end | |association_with_transcript=52bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end | ||
|cluster_id=chr20:54987220..54987233,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_CASS4_5end | |description=CAGE_peak_6_at_CASS4_5end | ||
|id=chr20:54987220..54987233,+ | |id=chr20:54987220..54987233,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.99e-35!112;CL:0000049!1.99e-35!112;CL:0000766!1.62e-33!76;CL:0000037!6.80e-29!172;CL:0000566!6.80e-29!172;CL:0000557!1.93e-28!71;CL:0000738!4.37e-28!140;CL:0002032!1.01e-27!165;CL:0000837!1.01e-27!165;CL:0000988!1.95e-27!182;CL:0000839!5.34e-26!70;CL:0002009!6.44e-26!65;CL:0002194!4.10e-24!63;CL:0000576!4.10e-24!63;CL:0000040!4.10e-24!63;CL:0000559!4.10e-24!63;CL:0002031!1.86e-19!124;CL:0002057!8.71e-19!42;CL:0002087!2.55e-17!119;CL:0000860!7.88e-17!45;CL:0000990!6.35e-10!8;CL:0000134!6.74e-10!358;CL:0002320!1.44e-09!365;CL:0000451!1.97e-09!10;CL:0000094!5.53e-08!8;CL:0000840!9.61e-08!5;CL:0001029!9.61e-08!5;CL:0000219!3.88e-07!390 | |ontology_enrichment_celltype=CL:0000763!1.99e-35!112;CL:0000049!1.99e-35!112;CL:0000766!1.62e-33!76;CL:0000037!6.80e-29!172;CL:0000566!6.80e-29!172;CL:0000557!1.93e-28!71;CL:0000738!4.37e-28!140;CL:0002032!1.01e-27!165;CL:0000837!1.01e-27!165;CL:0000988!1.95e-27!182;CL:0000839!5.34e-26!70;CL:0002009!6.44e-26!65;CL:0002194!4.10e-24!63;CL:0000576!4.10e-24!63;CL:0000040!4.10e-24!63;CL:0000559!4.10e-24!63;CL:0002031!1.86e-19!124;CL:0002057!8.71e-19!42;CL:0002087!2.55e-17!119;CL:0000860!7.88e-17!45;CL:0000990!6.35e-10!8;CL:0000134!6.74e-10!358;CL:0002320!1.44e-09!365;CL:0000451!1.97e-09!10;CL:0000094!5.53e-08!8;CL:0000840!9.61e-08!5;CL:0001029!9.61e-08!5;CL:0000219!3.88e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.99e-15;3!CL:0000094;1.27e-14;8!CL:0000860;4.41e-14;33!CL:0002057;4.41e-14;33!CL:0000473;1.37e-13;39!CL:0000234;1.37e-13;39!CL:0000840;1.01e-11;5!CL:0000766;1.22e-10;69!CL:0000081;1.55e-10;11!CL:0000771;1.88e-10;2!CL:0000097;2.27e-08;5!CL:0000763;4.36e-08;100!CL:0000990;7.77e-08;8!CL:0000576;1.71e-07;48!CL:0000738;9.64e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.60e-31,72;CL:0000763,2.33e-24,108;CL:0000049,2.33e-24,108;CL:0000557,2.47e-22,67;CL:0000839,1.71e-20,66;CL:0002009,1.15e-17,61;CL:0000738,1.38e-16,136;CL:0002194,2.71e-16,59;CL:0000576,2.71e-16,59;CL:0000040,2.71e-16,59;CL:0000559,2.71e-16,59;CL:0002032,1.35e-15,161;CL:0000837,1.35e-15,161;CL:0000775,6.87e-15,3;CL:0000037,1.13e-14,168;CL:0000094,1.25e-14,8;CL:0000473,5.67e-14,48;CL:0000234,5.67e-14,48;CL:0000988,1.35e-13,177;CL:0000860,9.11e-12,42;CL:0002057,9.11e-12,42;CL:0002031,1.03e-11,120;CL:0000840,1.46e-11,5;CL:0001029,1.46e-11,5;CL:0000081,1.52e-10,11;CL:0000771,1.84e-10,2;CL:0000097,1.65e-08,5;CL:0002028,1.65e-08,5;CL:0000990,9.86e-08,8;CL:0002087,1.16e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-34!102;UBERON:0003061!2.33e-34!102;UBERON:0002193!9.11e-32!112;UBERON:0002371!2.56e-23!80;UBERON:0001474!1.57e-20!86;UBERON:0002405!1.99e-17!115;UBERON:0004765!7.29e-16!101;UBERON:0001434!7.29e-16!101;UBERON:0000178!2.48e-10!15;UBERON:0000179!2.48e-10!15;UBERON:0000463!2.48e-10!15;UBERON:0007023!6.79e-10!115;UBERON:0003081!6.49e-09!216;UBERON:0002384!1.34e-08!375;UBERON:0002204!1.24e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.44e-22;15!UBERON:0000179;1.44e-22;15!UBERON:0000463;1.44e-22;15!UBERON:0002390;6.03e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.25e-32,98;UBERON:0003061,4.25e-32,98;UBERON:0002193,9.25e-31,108;UBERON:0000178,1.12e-22,15;UBERON:0000179,1.12e-22,15;UBERON:0000463,1.12e-22,15;UBERON:0002371,3.83e-19,76;UBERON:0001474,2.10e-17,82;UBERON:0002405,1.69e-16,93;UBERON:0004765,1.92e-15,90;UBERON:0001434,1.96e-13,100;UBERON:0003081,5.16e-12,203;UBERON:0000926,3.84e-08,315;UBERON:0004120,3.84e-08,315;UBERON:0006603,3.84e-08,315;UBERON:0002204,5.98e-08,167 | |||
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| ||
|short_description=p6@CASS4 | |short_description=p6@CASS4 | ||
}} | }} |
Latest revision as of 03:06, 17 September 2015
Short description: | p6@CASS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CASS4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 52bp_to_ENST00000360314, NM_001164116, uc002xxp.2_5end |
EntrezGene: | CASS4 |
HGNC: | 15878 |
UniProt: | Q9NQ75B4DII4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.25e-32 | 98 |
blood island | 4.25e-32 | 98 |
hemolymphoid system | 9.25e-31 | 108 |
blood | 1.12e-22 | 15 |
haemolymphatic fluid | 1.12e-22 | 15 |
organism substance | 1.12e-22 | 15 |
bone marrow | 3.83e-19 | 76 |
bone element | 2.10e-17 | 82 |
immune system | 1.69e-16 | 93 |
skeletal element | 1.92e-15 | 90 |
skeletal system | 1.96e-13 | 100 |
lateral plate mesoderm | 5.16e-12 | 203 |
mesoderm | 3.84e-08 | 315 |
mesoderm-derived structure | 3.84e-08 | 315 |
presumptive mesoderm | 3.84e-08 | 315 |
musculoskeletal system | 5.98e-08 | 167 |