FFCP PHASE1:Hg19::chr17:17584636..17584651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10743 | |EntrezGene=10743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9834 | |HGNC=9834 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5J4 | |UniProt=Q7Z5J4 | ||
|association_with_transcript=-135bp_to_ENST00000353383,NM_030665,uc002grm.2_5end | |association_with_transcript=-135bp_to_ENST00000353383,NM_030665,uc002grm.2_5end | ||
|cluster_id=chr17:17584636..17584651,+ | |||
|description=CAGE_peak_4_at_RAI1_5end | |description=CAGE_peak_4_at_RAI1_5end | ||
|id=chr17:17584636..17584651,+ | |id=chr17:17584636..17584651,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.16e-07!235 | |ontology_enrichment_disease=DOID:162!5.16e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.94e-09!57;UBERON:0005068!2.94e-09!57;UBERON:0006241!2.94e-09!57;UBERON:0007135!2.94e-09!57;UBERON:0001869!1.48e-08!32;UBERON:0002346!1.71e-08!90;UBERON:0002780!1.83e-08!41;UBERON:0001890!1.83e-08!41;UBERON:0006240!1.83e-08!41;UBERON:0001893!2.25e-08!34;UBERON:0002020!3.63e-08!34;UBERON:0003528!3.63e-08!34;UBERON:0000955!4.39e-08!69;UBERON:0006238!4.39e-08!69;UBERON:0002791!4.53e-08!33;UBERON:0003080!7.93e-08!42;UBERON:0003075!1.04e-07!86;UBERON:0007284!1.04e-07!86;UBERON:0002616!1.22e-07!59;UBERON:0001950!2.98e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.40e-08;34!UBERON:0001950;3.55e-08;20!UBERON:0001869;8.36e-08;32!UBERON:0003528;2.36e-07;34!UBERON:0002020;2.36e-07;34!UBERON:0002619;4.49e-07;22!UBERON:0002791;5.66e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.06e-10,53;UBERON:0002616,2.06e-10,53;UBERON:0001049,3.80e-10,56;UBERON:0005068,3.80e-10,56;UBERON:0006241,3.80e-10,56;UBERON:0007135,3.80e-10,56;UBERON:0000955,7.78e-10,68;UBERON:0006238,7.78e-10,68;UBERON:0002346,1.59e-09,86;UBERON:0001869,2.57e-09,32;UBERON:0002780,3.05e-09,41;UBERON:0001890,3.05e-09,41;UBERON:0003080,3.05e-09,41;UBERON:0006240,3.05e-09,41;UBERON:0001893,3.60e-09,34;UBERON:0001950,1.24e-08,20;UBERON:0003075,1.94e-08,82;UBERON:0007284,1.94e-08,82;UBERON:0002791,2.19e-08,32;UBERON:0001017,2.40e-08,81;UBERON:0003528,2.59e-08,34;UBERON:0002020,2.59e-08,34;UBERON:0001016,1.23e-07,89;UBERON:0002619,1.76e-07,22;UBERON:0000956,6.07e-07,25;UBERON:0000203,6.07e-07,25 | |||
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| ||
|short_description=p4@RAI1 | |short_description=p4@RAI1 | ||
}} | }} |
Latest revision as of 21:56, 18 September 2015
Short description: | p4@RAI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAI1_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_ENST00000353383, NM_030665, uc002grm.2_5end |
EntrezGene: | RAI1 |
HGNC: | 9834 |
UniProt: | Q7Z5J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.06e-10 | 53 |
regional part of brain | 2.06e-10 | 53 |
neural tube | 3.80e-10 | 56 |
neural rod | 3.80e-10 | 56 |
future spinal cord | 3.80e-10 | 56 |
neural keel | 3.80e-10 | 56 |
brain | 7.78e-10 | 68 |
future brain | 7.78e-10 | 68 |
neurectoderm | 1.59e-09 | 86 |
cerebral hemisphere | 2.57e-09 | 32 |
regional part of forebrain | 3.05e-09 | 41 |
forebrain | 3.05e-09 | 41 |
anterior neural tube | 3.05e-09 | 41 |
future forebrain | 3.05e-09 | 41 |
telencephalon | 3.60e-09 | 34 |
neocortex | 1.24e-08 | 20 |
neural plate | 1.94e-08 | 82 |
presumptive neural plate | 1.94e-08 | 82 |
regional part of telencephalon | 2.19e-08 | 32 |
central nervous system | 2.40e-08 | 81 |
brain grey matter | 2.59e-08 | 34 |
gray matter | 2.59e-08 | 34 |
nervous system | 1.23e-07 | 89 |
regional part of cerebral cortex | 1.76e-07 | 22 |
cerebral cortex | 6.07e-07 | 25 |
pallium | 6.07e-07 | 25 |