FFCP PHASE1:Hg19::chr10:111985713..111985774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4601 | |EntrezGene=4601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7534 | |HGNC=7534 | ||
|TSSclassifier=strong | |||
|UniProt=P50539,B1ANN8 | |UniProt=P50539,B1ANN8 | ||
|association_with_transcript=0bp_to_ENST00000239007,ENST00000369619,NM_005962,uc001kza.2,uc010qrc.1_5end | |||
|cluster_id=chr10:111985713..111985774,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_MXI1_5end | |||
|id=chr10:111985713..111985774,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.97e-10!140;CL:0000766!3.23e-08!76;CL:0002057!6.39e-08!42;CL:0000037!1.40e-07!172;CL:0000566!1.40e-07!172;CL:0000860!2.08e-07!45;CL:0002031!5.17e-07!124;CL:0002032!8.59e-07!165;CL:0000837!8.59e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.10e-10,136;CL:0000766,1.11e-08,72;CL:0000860,6.39e-08,42;CL:0002057,6.39e-08,42;CL:0000037,9.17e-08,168;CL:0002031,3.03e-07,120;CL:0000473,3.55e-07,48;CL:0000234,3.55e-07,48;CL:0002032,5.79e-07,161;CL:0000837,5.79e-07,161;CL:0002087,7.84e-07,115;CL:0000839,8.83e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.98e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.04e-53!115;UBERON:0001049!1.92e-16!57;UBERON:0005068!1.92e-16!57;UBERON:0006241!1.92e-16!57;UBERON:0007135!1.92e-16!57;UBERON:0003080!2.01e-13!42;UBERON:0002780!5.97e-13!41;UBERON:0001890!5.97e-13!41;UBERON:0006240!5.97e-13!41;UBERON:0002616!1.12e-12!59;UBERON:0000955!2.11e-11!69;UBERON:0006238!2.11e-11!69;UBERON:0001893!1.77e-10!34;UBERON:0002020!2.42e-10!34;UBERON:0003528!2.42e-10!34;UBERON:0002791!4.73e-10!33;UBERON:0001017!7.41e-10!82;UBERON:0005743!1.30e-09!86;UBERON:0002619!1.31e-09!22;UBERON:0001869!1.79e-09!32;UBERON:0001950!9.79e-09!20;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0002390!1.40e-08!102;UBERON:0003061!1.40e-08!102;UBERON:0002346!1.43e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.73e-14;114!UBERON:0002780;9.93e-10;41!UBERON:0001890;9.93e-10;41!UBERON:0002619;1.32e-09;22!UBERON:0001893;4.73e-09;34!UBERON:0000073;4.95e-09;53!UBERON:0002616;4.95e-09;53!UBERON:0001950;9.92e-09;20!UBERON:0003528;1.07e-08;34!UBERON:0002020;1.07e-08;34!UBERON:0002791;1.44e-08;32!UBERON:0001869;1.52e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.13e-52,114;UBERON:0001049,5.68e-16,56;UBERON:0005068,5.68e-16,56;UBERON:0006241,5.68e-16,56;UBERON:0007135,5.68e-16,56;UBERON:0000073,9.05e-15,53;UBERON:0002616,9.05e-15,53;UBERON:0002780,5.92e-13,41;UBERON:0001890,5.92e-13,41;UBERON:0003080,5.92e-13,41;UBERON:0006240,5.92e-13,41;UBERON:0000955,5.29e-11,68;UBERON:0006238,5.29e-11,68;UBERON:0001893,1.75e-10,34;UBERON:0003528,2.40e-10,34;UBERON:0002020,2.40e-10,34;UBERON:0002619,1.31e-09,22;UBERON:0002791,1.58e-09,32;UBERON:0001017,1.69e-09,81;UBERON:0001869,1.78e-09,32;UBERON:0002390,5.86e-09,98;UBERON:0003061,5.86e-09,98;UBERON:0001950,9.78e-09,20;UBERON:0001016,1.74e-08,89;UBERON:0003075,2.31e-08,82;UBERON:0007284,2.31e-08,82;UBERON:0002346,2.48e-08,86;UBERON:0002193,5.84e-07,108 | |||
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| ||
|short_description=p2@MXI1 | |||
}} | }} |
Latest revision as of 08:10, 16 September 2015
Short description: | p2@MXI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MXI1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000239007, ENST00000369619, NM_005962, uc001kza.2, uc010qrc.1_5end |
EntrezGene: | MXI1 |
HGNC: | 7534 |
UniProt: | P50539B1ANN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.10e-10 | 136 |
myeloid leukocyte | 1.11e-08 | 72 |
classical monocyte | 6.39e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.39e-08 | 42 |
hematopoietic stem cell | 9.17e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 3.03e-07 | 120 |
defensive cell | 3.55e-07 | 48 |
phagocyte | 3.55e-07 | 48 |
hematopoietic oligopotent progenitor cell | 5.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.79e-07 | 161 |
nongranular leukocyte | 7.84e-07 | 115 |
myeloid lineage restricted progenitor cell | 8.83e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.13e-52 | 114 |
neural tube | 5.68e-16 | 56 |
neural rod | 5.68e-16 | 56 |
future spinal cord | 5.68e-16 | 56 |
neural keel | 5.68e-16 | 56 |
regional part of nervous system | 9.05e-15 | 53 |
regional part of brain | 9.05e-15 | 53 |
regional part of forebrain | 5.92e-13 | 41 |
forebrain | 5.92e-13 | 41 |
anterior neural tube | 5.92e-13 | 41 |
future forebrain | 5.92e-13 | 41 |
brain | 5.29e-11 | 68 |
future brain | 5.29e-11 | 68 |
telencephalon | 1.75e-10 | 34 |
brain grey matter | 2.40e-10 | 34 |
gray matter | 2.40e-10 | 34 |
regional part of cerebral cortex | 1.31e-09 | 22 |
regional part of telencephalon | 1.58e-09 | 32 |
central nervous system | 1.69e-09 | 81 |
cerebral hemisphere | 1.78e-09 | 32 |
hematopoietic system | 5.86e-09 | 98 |
blood island | 5.86e-09 | 98 |
neocortex | 9.78e-09 | 20 |
nervous system | 1.74e-08 | 89 |
neural plate | 2.31e-08 | 82 |
presumptive neural plate | 2.31e-08 | 82 |
neurectoderm | 2.48e-08 | 86 |
hemolymphoid system | 5.84e-07 | 108 |