FFCP PHASE1:Hg19::chr17:4269260..4269272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4269260..4269272,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr17:4269260..4269272,- | |description=CAGE_peak_at_chr17:4269260..4269272,- | ||
|id=chr17:4269260..4269272,- | |id=chr17:4269260..4269272,- | ||
|ontology_enrichment_celltype=CL:0000133!3.73e-08!59;CL:0002322!1.32e-07!5;CL:0002319!9.02e-07!25 | |ontology_enrichment_celltype=CL:0000133!3.73e-08!59;CL:0002322!1.32e-07!5;CL:0002319!9.02e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002032;9.48e-18;1!CL:0000511;9.48e-18;1!CL:0002625;9.48e-18;1!CL:0000228;9.48e-18;1!CL:0000557;9.48e-18;1!CL:0000216;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000307;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.26e-18,1;CL:0002625,5.26e-18,1;CL:0000216,5.26e-18,1;CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.74e-18;1!UBERON:0009117;1.05e-07;10!UBERON:0005564;1.05e-07;10!UBERON:0003056;6.50e-07;3!CL:0000377;8.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.94e-19;8!UBERON:0000941;3.74e-18;1!UBERON:0001785;3.74e-18;1!UBERON:0002464;3.74e-18;1!UBERON:0004904;3.74e-18;1!UBERON:0001021;3.74e-18;1!UBERON:0001136;9.48e-18;1!UBERON:0001343;9.48e-18;1!UBERON:0004910;9.48e-18;1!UBERON:0004813;9.48e-18;1!UBERON:0003135;2.51e-14;11!UBERON:0003714;9.46e-10;2!UBERON:0005162;9.46e-10;2!UBERON:0000122;9.46e-10;2!UBERON:0004909;1.51e-09;2!UBERON:0000991;8.76e-08;21!UBERON:0003101;1.87e-07;22!UBERON:0000079;1.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.56e-19,8;UBERON:0000941,3.16e-18,1;UBERON:0001785,3.16e-18,1;UBERON:0002464,3.16e-18,1;UBERON:0004904,3.16e-18,1;UBERON:0001021,3.16e-18,1;UBERON:0003902,3.16e-18,1;UBERON:0005425,3.16e-18,1;UBERON:0001136,5.26e-18,1;UBERON:0001343,5.26e-18,1;UBERON:0004910,5.26e-18,1;UBERON:0005154,5.26e-18,1;UBERON:0005295,5.26e-18,1;UBERON:0004813,5.26e-18,1;UBERON:0005297,5.26e-18,1;UBERON:0005294,5.26e-18,1;UBERON:0010141,5.26e-18,1;UBERON:0005891,5.26e-18,1;UBERON:0003135,2.15e-14,11;UBERON:0003714,8.69e-10,2;UBERON:0005162,8.69e-10,2;UBERON:0000122,8.69e-10,2;UBERON:0004909,1.12e-09,2;UBERON:0004871,3.55e-09,8;UBERON:0000991,8.08e-08,21;UBERON:0009196,8.08e-08,21;UBERON:0009117,8.08e-08,21;UBERON:0005564,8.08e-08,21;UBERON:0004176,1.73e-07,22;UBERON:0003101,1.73e-07,22;UBERON:0000079,1.73e-07,22;UBERON:0004876,5.98e-07,11 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.795178609928912,0.464775771478074,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.744316738719335,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0.217294743844016,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0.182454789215666,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0,0.441280633457501,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.39961921916426,0,0,0.171594997861965,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0.236349546921671,0.0824158583811665,0.202210631562555,0,0,0,0,1.28602518772015,0.550157746388935,0,0,0,0.0607495566580247,0,0,0.104909176269996,0.105600336519406,0,0,0,0.662091970365432,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0.383683113910955,0.215649622793364,0.157265941855896,0,0.169732529954025,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,2.85538840518309,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0.128915775947154,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.655593431782173,0,0.509944148709909,0,0.18378979906969,0.752122617877125,2.42491834298366,5.35928260312357,0,0,0,0.476128862927481,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:4269260..4269272,- | |short_description=p@chr17:4269260..4269272,- | ||
}} | }} |
Latest revision as of 17:27, 25 July 2015
Short description: | p@chr17:4269260..4269272, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4269260..4269272, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.26e-18 | 1 |
seminiferous tubule epithelial cell | 5.26e-18 | 1 |
Sertoli cell | 5.26e-18 | 1 |
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.56e-19 | 8 |
cranial nerve II | 3.16e-18 | 1 |
cranial nerve | 3.16e-18 | 1 |
nerve trunk | 3.16e-18 | 1 |
nerve connecting eye with brain | 3.16e-18 | 1 |
nerve | 3.16e-18 | 1 |
retinal neural layer | 3.16e-18 | 1 |
presumptive neural retina | 3.16e-18 | 1 |
mesothelium | 5.26e-18 | 1 |
seminiferous tubule of testis | 5.26e-18 | 1 |
epithelium of male gonad | 5.26e-18 | 1 |
epithelial cord | 5.26e-18 | 1 |
sex cord | 5.26e-18 | 1 |
seminiferous tubule epithelium | 5.26e-18 | 1 |
testis sex cord | 5.26e-18 | 1 |
genital ridge | 5.26e-18 | 1 |
primitive sex cord of indifferent gonad | 5.26e-18 | 1 |
coelomic epithelium | 5.26e-18 | 1 |
male reproductive organ | 2.15e-14 | 11 |
neural tissue | 8.69e-10 | 2 |
multi cell component structure | 8.69e-10 | 2 |
neuron projection bundle | 8.69e-10 | 2 |
epithelium of gonad | 1.12e-09 | 2 |
somatic layer of lateral plate mesoderm | 3.55e-09 | 8 |
gonad | 8.08e-08 | 21 |
indifferent external genitalia | 8.08e-08 | 21 |
indifferent gonad | 8.08e-08 | 21 |
gonad primordium | 8.08e-08 | 21 |
external genitalia | 1.73e-07 | 22 |
male organism | 1.73e-07 | 22 |
male reproductive system | 1.73e-07 | 22 |
urogenital ridge | 5.98e-07 | 11 |