FFCP PHASE1:Hg19::chr2:102511066..102511072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:102511066..102511072,+ | |||
|description=CAGE_peak_at_chr2:102511066..102511072,+ | |description=CAGE_peak_at_chr2:102511066..102511072,+ | ||
|id=chr2:102511066..102511072,+ | |id=chr2:102511066..102511072,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002598;1.91e-15;2!CL:0002567;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,2.05e-15,2;CL:0002567,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.47e-30;1!UBERON:0003056;6.73e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.53e-17!94;UBERON:0001016!1.53e-17!94;UBERON:0001017!6.96e-17!82;UBERON:0001049!3.38e-16!57;UBERON:0005068!3.38e-16!57;UBERON:0006241!3.38e-16!57;UBERON:0007135!3.38e-16!57;UBERON:0005743!1.20e-15!86;UBERON:0000955!2.41e-13!69;UBERON:0006238!2.41e-13!69;UBERON:0002616!1.61e-12!59;UBERON:0002020!1.25e-11!34;UBERON:0003528!1.25e-11!34;UBERON:0002780!2.60e-11!41;UBERON:0001890!2.60e-11!41;UBERON:0006240!2.60e-11!41;UBERON:0003080!6.35e-11!42;UBERON:0004121!1.28e-10!169;UBERON:0007023!1.91e-10!115;UBERON:0000924!4.24e-10!173;UBERON:0006601!4.24e-10!173;UBERON:0003075!5.16e-10!86;UBERON:0007284!5.16e-10!86;UBERON:0001893!8.07e-10!34;UBERON:0002619!1.75e-09!22;UBERON:0002346!3.13e-09!90;UBERON:0001869!3.96e-09!32;UBERON:0002791!4.65e-09!33;UBERON:0000956!4.92e-08!25;UBERON:0000203!4.92e-08!25;UBERON:0002298!8.95e-08!8;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0001950!3.14e-07!20;UBERON:0000033!4.05e-07!123;UBERON:0002240!5.45e-07!3;UBERON:0006331!7.82e-07!3;UBERON:0000349!9.15e-07!5;UBERON:0003076!9.22e-07!15;UBERON:0003057!9.22e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.47e-30;1!UBERON:0001785;7.47e-30;1!UBERON:0002464;7.47e-30;1!UBERON:0004904;7.47e-30;1!UBERON:0001021;7.47e-30;1!UBERON:0003714;1.15e-15;2!UBERON:0005162;1.15e-15;2!UBERON:0000122;1.15e-15;2!UBERON:0002148;1.91e-15;2!UBERON:0001875;1.91e-15;2!UBERON:0006331;1.91e-15;2!UBERON:0009662;1.91e-15;2!UBERON:0006514;1.91e-15;2!UBERON:0000125;1.49e-13;9!UBERON:0002308;1.49e-13;9!UBERON:0000988;9.43e-11;3!UBERON:0004732;9.30e-10;13!UBERON:0002021;5.86e-07;5!UBERON:0002185;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.48e-30,1;UBERON:0001785,7.48e-30,1;UBERON:0002464,7.48e-30,1;UBERON:0004904,7.48e-30,1;UBERON:0001021,7.48e-30,1;UBERON:0003902,7.48e-30,1;UBERON:0005425,7.48e-30,1;UBERON:0003714,1.15e-15,2;UBERON:0005162,1.15e-15,2;UBERON:0000122,1.15e-15,2;UBERON:0002148,1.54e-15,2;UBERON:0006331,1.54e-15,2;UBERON:0009662,1.54e-15,2;UBERON:0001875,1.78e-15,2;UBERON:0006514,1.78e-15,2;UBERON:0000125,1.31e-13,9;UBERON:0002308,1.31e-13,9;UBERON:0000988,8.17e-11,3;UBERON:0004732,8.71e-10,13;UBERON:0001781,1.70e-08,4;UBERON:0001016,4.90e-08,89;UBERON:0003528,5.73e-08,34;UBERON:0002020,5.73e-08,34;UBERON:0002185,6.04e-07,5;UBERON:0002021,6.77e-07,5 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,1.36905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0.202210631562555,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.42211251997706,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0.147855149989634,0,0.899606224327209,0,0.829412415681711,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,1.11743701340006,0.205116364240755,0.252071696221718,0,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.413373593002368,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,0,0.860037498908708,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,0,0.535928260312357,0,0.517164979309476,0,0.476128862927481,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:102511066..102511072,+ | |short_description=p@chr2:102511066..102511072,+ | ||
}} | }} |
Latest revision as of 22:46, 28 July 2015
Short description: | p@chr2:102511066..102511072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:102511066..102511072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 2.05e-15 | 2 |
light melanocyte | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.48e-30 | 1 |
cranial nerve | 7.48e-30 | 1 |
nerve trunk | 7.48e-30 | 1 |
nerve connecting eye with brain | 7.48e-30 | 1 |
nerve | 7.48e-30 | 1 |
retinal neural layer | 7.48e-30 | 1 |
presumptive neural retina | 7.48e-30 | 1 |
neural tissue | 1.15e-15 | 2 |
multi cell component structure | 1.15e-15 | 2 |
neuron projection bundle | 1.15e-15 | 2 |
locus ceruleus | 1.54e-15 | 2 |
brainstem nucleus | 1.54e-15 | 2 |
hindbrain nucleus | 1.54e-15 | 2 |
globus pallidus | 1.78e-15 | 2 |
pallidum | 1.78e-15 | 2 |
neural nucleus | 1.31e-13 | 9 |
nucleus of brain | 1.31e-13 | 9 |
pons | 8.17e-11 | 3 |
segmental subdivision of nervous system | 8.71e-10 | 13 |
layer of retina | 1.70e-08 | 4 |
nervous system | 4.90e-08 | 89 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
bronchus | 6.04e-07 | 5 |
occipital lobe | 6.77e-07 | 5 |