FFCP PHASE1:Hg19::chr17:66511224..66511241,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5573 | |EntrezGene=5573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9388 | |HGNC=9388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=262bp_to_uc002jhl.2_5end | |association_with_transcript=262bp_to_uc002jhl.2_5end | ||
|cluster_id=chr17:66511224..66511241,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_29_at_PRKAR1A_5end | |description=CAGE_peak_29_at_PRKAR1A_5end | ||
|id=chr17:66511224..66511241,+ | |id=chr17:66511224..66511241,+ | ||
|ontology_enrichment_celltype=CL:0000136!6.16e-07!15 | |ontology_enrichment_celltype=CL:0000136!6.16e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000569;3.32e-16;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.18e-16,4;CL:0000011,4.18e-16,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.41e-16;1!UBERON:0003852;1.41e-16;1!CL:0000011;3.32e-16;4!UBERON:0005062;3.32e-16;4!UBERON:0007284;3.32e-16;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002616!9.67e-07!59 | |ontology_enrichment_uberon=UBERON:0002616!9.67e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.41e-16;1!UBERON:0005705;1.41e-16;1!UBERON:0008193;1.41e-16;1!UBERON:0010912;1.41e-16;1!UBERON:0005208;1.41e-16;1!UBERON:0002514;1.41e-16;1!UBERON:0003457;1.41e-16;1!UBERON:0008907;1.41e-16;1!UBERON:0008001;1.41e-16;1!UBERON:0007213;1.41e-16;1!UBERON:0009891;1.41e-16;1!UBERON:0007914;1.41e-16;1!UBERON:0007375;1.41e-16;1!UBERON:0003323;1.41e-16;1!UBERON:0010258;1.41e-16;1!UBERON:0004145;1.41e-16;1!UBERON:0005946;1.41e-16;1!UBERON:0005253;1.41e-16;1!UBERON:0007842;1.41e-16;1!UBERON:0005965;1.41e-16;1!UBERON:0002397;1.41e-16;1!UBERON:0003113;1.41e-16;1!UBERON:0003277;1.41e-16;1!UBERON:0001709;1.41e-16;1!UBERON:0002078;1.41e-16;1!UBERON:0002244;1.41e-16;1!UBERON:0005620;1.41e-16;1!UBERON:0010364;1.41e-16;1!UBERON:0004288;1.41e-16;1!UBERON:0002081;5.93e-09;2!UBERON:0002133;5.93e-09;2!UBERON:0004089;5.93e-09;2!UBERON:0010313;4.95e-07;10!UBERON:0000948;7.94e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.21e-16,1;UBERON:0005208,1.21e-16,1;UBERON:0005946,1.21e-16,1;UBERON:0005965,1.21e-16,1;UBERON:0002078,1.21e-16,1;UBERON:0005705,2.63e-16,1;UBERON:0008193,2.63e-16,1;UBERON:0010912,2.63e-16,1;UBERON:0002514,2.63e-16,1;UBERON:0003457,2.63e-16,1;UBERON:0008907,2.63e-16,1;UBERON:0008001,2.63e-16,1;UBERON:0007213,2.63e-16,1;UBERON:0009891,2.63e-16,1;UBERON:0007914,2.63e-16,1;UBERON:0009292,2.63e-16,1;UBERON:0003099,2.63e-16,1;UBERON:0007375,2.63e-16,1;UBERON:0003323,2.63e-16,1;UBERON:0010258,2.63e-16,1;UBERON:0007842,2.63e-16,1;UBERON:0009494,2.63e-16,1;UBERON:0010042,2.63e-16,1;UBERON:0010045,2.63e-16,1;UBERON:0010259,2.63e-16,1;UBERON:0010359,2.63e-16,1;UBERON:0009526,2.63e-16,1;UBERON:0002397,2.63e-16,1;UBERON:0003113,2.63e-16,1;UBERON:0003277,2.63e-16,1;UBERON:0001709,2.63e-16,1;UBERON:0004066,2.63e-16,1;UBERON:0002244,2.63e-16,1;UBERON:0005620,2.63e-16,1;UBERON:0004362,2.63e-16,1;UBERON:0010364,2.63e-16,1;UBERON:0010046,2.63e-16,1;UBERON:0005868,2.63e-16,1;UBERON:0007238,2.63e-16,1;UBERON:0004288,2.63e-16,1;UBERON:0004068,2.63e-16,1;UBERON:0010334,2.63e-16,1;UBERON:0003852,2.63e-16,1;UBERON:0010253,2.63e-16,1;UBERON:0002081,5.49e-09,2;UBERON:0002133,5.49e-09,2;UBERON:0010227,5.49e-09,2;UBERON:0005253,8.09e-09,2;UBERON:0004089,8.09e-09,2;UBERON:0010313,5.43e-07,10;UBERON:0002342,5.43e-07,10;UBERON:0005062,5.43e-07,10 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.30648779579902,2.10333282469236,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0.698476837213859,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0,0,7.17149357331379,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0.2506898940227,1.53172788381731,0.983617892129413,0,0,0.122026264901963,0.250381861413,0.573409195690071,0,0.124192805882767,0,0,1.06154382279153,0.856396000634902,0,0,0,0.447764408660622,0.934853239388898,1.66441758450784,0.568209015825267,0.251567901752575,0,0.228840068396924,1.05861646634267,1.24349760466224,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0.406870733204662,0.727394636810238,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0,0,0,0.381882949668989,0,0,0.684466602170562,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.30648779579902,2.10333282469236,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0.698476837213859,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0,0,7.17149357331379,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0.2506898940227,1.53172788381731,0.983617892129413,0,0,0.122026264901963,0.250381861413,0.573409195690071,0,0.124192805882767,0,0,1.06154382279153,0.856396000634902,0,0,0,0.447764408660622,0.934853239388898,1.66441758450784,0.568209015825267,0.251567901752575,0,0.228840068396924,1.05861646634267,1.24349760466224,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0.406870733204662,0.727394636810238,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0,0,0,0.381882949668989,0,0,0.684466602170562,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p29@PRKAR1A | |short_description=p29@PRKAR1A | ||
}} | }} |
Latest revision as of 00:13, 17 September 2015
Short description: | p29@PRKAR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_PRKAR1A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 262bp_to_uc002jhl.2_5end |
EntrezGene: | PRKAR1A |
HGNC: | 9388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.18e-16 | 4 |
migratory trunk neural crest cell | 4.18e-16 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.94e-09 | 2 |