FFCP PHASE1:Hg19::chr17:76375331..76375345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76375331..76375345,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr17:76375331..76375345,- | |description=CAGE_peak_at_chr17:76375331..76375345,- | ||
|id=chr17:76375331..76375345,- | |id=chr17:76375331..76375345,- | ||
|ontology_enrichment_celltype=CL:0002057!6.69e-24!42;CL:0000860!1.99e-21!45;CL:0000766!3.34e-16!76;CL:0000012!3.25e-14!682;CL:0000548!1.41e-13!679;CL:0000004!1.41e-13!679;CL:0000255!1.41e-13!679;CL:0000144!1.80e-13!625;CL:0002194!6.05e-13!63;CL:0000576!6.05e-13!63;CL:0000040!6.05e-13!63;CL:0000559!6.05e-13!63;CL:0002009!7.21e-13!65;CL:0000003!7.85e-13!722;CL:0000048!1.73e-12!430;CL:0000557!3.28e-12!71;CL:0000723!7.92e-12!436;CL:0002371!1.49e-11!591;CL:0000034!1.54e-11!444;CL:0000839!7.54e-11!70;CL:0002320!1.14e-08!365;CL:0000134!1.50e-08!358;CL:0000063!4.53e-08!578;CL:0000094!2.41e-07!8;CL:0000763!3.71e-07!112;CL:0000049!3.71e-07!112 | |ontology_enrichment_celltype=CL:0002057!6.69e-24!42;CL:0000860!1.99e-21!45;CL:0000766!3.34e-16!76;CL:0000012!3.25e-14!682;CL:0000548!1.41e-13!679;CL:0000004!1.41e-13!679;CL:0000255!1.41e-13!679;CL:0000144!1.80e-13!625;CL:0002194!6.05e-13!63;CL:0000576!6.05e-13!63;CL:0000040!6.05e-13!63;CL:0000559!6.05e-13!63;CL:0002009!7.21e-13!65;CL:0000003!7.85e-13!722;CL:0000048!1.73e-12!430;CL:0000557!3.28e-12!71;CL:0000723!7.92e-12!436;CL:0002371!1.49e-11!591;CL:0000034!1.54e-11!444;CL:0000839!7.54e-11!70;CL:0002320!1.14e-08!365;CL:0000134!1.50e-08!358;CL:0000063!4.53e-08!578;CL:0000094!2.41e-07!8;CL:0000763!3.71e-07!112;CL:0000049!3.71e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-41;33!CL:0002057;2.10e-41;33!CL:0000473;7.36e-28;39!CL:0000234;7.36e-28;39!CL:0000576;4.53e-24;48!CL:0000766;2.80e-16;69!CL:0000094;1.28e-12;8!CL:0000081;1.36e-08;11!CL:0000763;9.10e-08;100!CL:0000048;8.92e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.54e-43,42;CL:0002057,7.54e-43,42;CL:0000473,9.84e-36,48;CL:0000234,9.84e-36,48;CL:0000766,1.02e-34,72;CL:0002009,1.56e-27,61;CL:0002194,2.68e-27,59;CL:0000576,2.68e-27,59;CL:0000040,2.68e-27,59;CL:0000559,2.68e-27,59;CL:0000557,8.46e-27,67;CL:0000839,2.71e-24,66;CL:0000034,4.73e-21,441;CL:0000048,6.77e-21,427;CL:0000723,9.95e-21,433;CL:0000134,2.65e-20,354;CL:0000763,4.95e-20,108;CL:0000049,4.95e-20,108;CL:0002320,6.61e-20,361;CL:0000738,2.47e-17,136;CL:0000219,7.34e-16,386;CL:0000094,1.28e-12,8;CL:0002087,2.48e-12,115;CL:0000037,2.79e-12,168;CL:0000988,7.39e-11,177;CL:0002031,1.67e-10,120;CL:0002032,2.55e-10,161;CL:0000837,2.55e-10,161;CL:0000081,1.35e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.50e-31;42!CL:0000049;8.81e-07;108 | |||
|ontology_enrichment_disease=DOID:2394!1.13e-08!14;DOID:120!4.72e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.65e-13;14!DOID:120;1.42e-08;27!DOID:193;1.06e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.42e-13,14;DOID:120,1.15e-08,27;DOID:193,8.75e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.39e-11!80;UBERON:0003081!6.13e-11!216;UBERON:0001474!3.29e-10!86;UBERON:0002204!3.29e-10!167;UBERON:0004765!6.78e-09!101;UBERON:0001434!6.78e-09!101;UBERON:0002384!1.12e-08!375;UBERON:0002405!1.23e-08!115;UBERON:0002390!2.91e-08!102;UBERON:0003061!2.91e-08!102;UBERON:0002193!6.88e-08!112 | |ontology_enrichment_uberon=UBERON:0002371!1.39e-11!80;UBERON:0003081!6.13e-11!216;UBERON:0001474!3.29e-10!86;UBERON:0002204!3.29e-10!167;UBERON:0004765!6.78e-09!101;UBERON:0001434!6.78e-09!101;UBERON:0002384!1.12e-08!375;UBERON:0002405!1.23e-08!115;UBERON:0002390!2.91e-08!102;UBERON:0003061!2.91e-08!102;UBERON:0002193!6.88e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;7.49e-07;5!UBERON:0000992;9.25e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.20e-27,76;UBERON:0001474,3.89e-24,82;UBERON:0003081,9.69e-22,203;UBERON:0004765,1.08e-21,90;UBERON:0002390,5.08e-21,98;UBERON:0003061,5.08e-21,98;UBERON:0002405,1.42e-20,93;UBERON:0002384,2.86e-19,371;UBERON:0001434,5.12e-19,100;UBERON:0002193,1.40e-18,108;UBERON:0000926,1.78e-15,315;UBERON:0004120,1.78e-15,315;UBERON:0006603,1.78e-15,315;UBERON:0002204,5.84e-14,167;UBERON:0002118,5.85e-07,5;UBERON:0000992,7.19e-07,13 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.994192127183747,2.6893005858071,0.602694528023977,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,16.9146639045029,9.21190555433311,6.50227717927519,0.919421224478927,0,0.739508020333575,0,0,1.17440175733939,19.3898392986157,17.046278034962,18.2289131401316,0,0,0,2.90796477559129,1.51150377475524,3.39617685662943,8.13501629169896,8.63452564845834,16.4144376574405,57.5384784644301,45.852766468709,65.5055776791381,29.9928742240858,18.0735711403471,36.5651513804723,6.40023954444856,4.36649840092553,5.39336362668203,29.6901375599776,11.2325159476633,16.6227652707751,13.1940520074686,21.5420750231362,22.1636870277001,17.9929727949722,13.6172453925874,10.5879782329248,67.3346422888072,64.663881884105,72.1066964420987,10.2917915447673,9.94349617166425,14.2408074348398,0.211255286311942,1.06302149982522,0,4.4931452458598,3.60424542819615,1.12507910687956,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,2.80254281490768,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,1.06976078313403,0.434473211648397,2.43806866313962,1.34140171940727,0.383587685530591,0.361439152384566,0,0.289693037921647,0,1.45990461090791,0,0,0.263504357079378,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,1.71598473234038,0,0.79504962946682,0,1.38856200643038,0.56530794192401,0.838998872419812,1.6507082516404,2.50793959844173,0,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.225222960966644,10.7321646226118,5.69559395740877,1.83201743930407,10.5424333948851,31.022421131866,0,0.993943903390637,0.633152558322899,5.16395805171553,4.01571269048339,2.12801029319014,0.560677600142307,1.06748995729705,0,0,0,0,0,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0.485618833104395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.907457465280168,4.48474089222155,0,0.423863802319124,1.20036438433761,0.309157587715317,4.89517026086695,0,0.337552664482532,0.194874010322397,5.80597680761463,0.184099797284599,0,3.19508633264953,0.403008392910561,0.508681776931463,0,0,0.286804595389004,0.121973706129595,0,0,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,3.71494342425583,2.88751792667834,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,2.80483547606892,0,0,0,0.982827216677626,1.77236972004421,0.441463099414651,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0.352226082707465,0.433099343283221,1.38895653772983,0.570762456703795,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0.581267877027924,0,0,0,1.24396869324463,0,0.12624243342638,0,0,0,0,0,0,0,0.336393253036082,0,0.36669142910475,1.16344544182,0,1.690605505112,0,0,0,0,0,0.857867961948885,0,0,1.30294473717494,1.06617584622764,0.791951872933429,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0.788123040807709,0.431255149719035,1.28343036279748,0,0,0.773288812777695,0.167516265334349,1.27587750330633,11.2351053592077,26.9245313283622,16.9910360508775,0.12269149171914,0,1.08506009479894,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0,0,0,1.03384013061444,3.23571301227925,5.65656056358255,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0.160853921143607,0,1.23367755042124,0.177561725313127,0.98552587216571,2.07701771673448,1.85936605535935,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0.422206515571503,2.27466768141793,0.680374821106063,0.863663664408557,3.08454505380579,0.270946437543853,0,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.661139661443912,0.192190067365106,1.65896526242959,0.30347334256665,0,6.61105928344344,1.3940745403212,0.308033580176089,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,1.90921948755562,0,0,0.54907405947211,0.589062011728432,0,0,1.26377536871694,0.48763373908959,0.731140468893853,1.05650146756755,0.136499911407986,0.282810863907425,0,1.65409603063837,1.32687795048244,1.31535265576129,0,0.655894752046633,0.202910376962704,0.30982349809975,0.563391205064483,0.573645408816206,0.196498082026242,0,2.83808851256478,1.47775344708365,0.987884678879706,0,0,0.384888450902048,0,8.71127878890581,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,1.33479313369527,0.19538809540204,0,0,0,0,0,0,0.293016358543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| ||
|short_description=p@chr17:76375331..76375345,- | |short_description=p@chr17:76375331..76375345,- | ||
}} | }} |
Latest revision as of 21:59, 25 July 2015
Short description: | p@chr17:76375331..76375345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76375331..76375345, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.54e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.54e-43 | 42 |
defensive cell | 9.84e-36 | 48 |
phagocyte | 9.84e-36 | 48 |
myeloid leukocyte | 1.02e-34 | 72 |
macrophage dendritic cell progenitor | 1.56e-27 | 61 |
monopoietic cell | 2.68e-27 | 59 |
monocyte | 2.68e-27 | 59 |
monoblast | 2.68e-27 | 59 |
promonocyte | 2.68e-27 | 59 |
granulocyte monocyte progenitor cell | 8.46e-27 | 67 |
myeloid lineage restricted progenitor cell | 2.71e-24 | 66 |
stem cell | 4.73e-21 | 441 |
multi fate stem cell | 6.77e-21 | 427 |
somatic stem cell | 9.95e-21 | 433 |
mesenchymal cell | 2.65e-20 | 354 |
myeloid cell | 4.95e-20 | 108 |
common myeloid progenitor | 4.95e-20 | 108 |
connective tissue cell | 6.61e-20 | 361 |
leukocyte | 2.47e-17 | 136 |
motile cell | 7.34e-16 | 386 |
granulocyte | 1.28e-12 | 8 |
nongranular leukocyte | 2.48e-12 | 115 |
hematopoietic stem cell | 2.79e-12 | 168 |
hematopoietic cell | 7.39e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.67e-10 | 120 |
hematopoietic oligopotent progenitor cell | 2.55e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-10 | 161 |
blood cell | 1.35e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.20e-27 | 76 |
bone element | 3.89e-24 | 82 |
lateral plate mesoderm | 9.69e-22 | 203 |
skeletal element | 1.08e-21 | 90 |
hematopoietic system | 5.08e-21 | 98 |
blood island | 5.08e-21 | 98 |
immune system | 1.42e-20 | 93 |
connective tissue | 2.86e-19 | 371 |
skeletal system | 5.12e-19 | 100 |
hemolymphoid system | 1.40e-18 | 108 |
mesoderm | 1.78e-15 | 315 |
mesoderm-derived structure | 1.78e-15 | 315 |
presumptive mesoderm | 1.78e-15 | 315 |
musculoskeletal system | 5.84e-14 | 167 |
right ovary | 5.85e-07 | 5 |
female gonad | 7.19e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.42e-13 | 14 |
female reproductive organ cancer | 1.15e-08 | 27 |
reproductive organ cancer | 8.75e-08 | 29 |