FFCP PHASE1:Hg19::chr17:76409198..76409218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76409198..76409218,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr17:76409198..76409218,- | |description=CAGE_peak_at_chr17:76409198..76409218,- | ||
|id=chr17:76409198..76409218,- | |id=chr17:76409198..76409218,- | ||
|ontology_enrichment_celltype=CL:0002057!4.78e-75!42;CL:0000860!4.00e-69!45;CL:0000766!1.73e-55!76;CL:0002194!8.21e-47!63;CL:0000576!8.21e-47!63;CL:0000040!8.21e-47!63;CL:0000559!8.21e-47!63;CL:0002009!5.59e-45!65;CL:0000839!7.46e-41!70;CL:0000557!4.25e-40!71;CL:0000763!7.58e-36!112;CL:0000049!7.58e-36!112;CL:0000738!1.23e-32!140;CL:0002087!5.81e-28!119;CL:0000037!1.21e-25!172;CL:0000566!1.21e-25!172;CL:0002032!1.14e-23!165;CL:0000837!1.14e-23!165;CL:0000988!2.59e-23!182;CL:0002031!3.87e-22!124;CL:0000094!3.60e-16!8;CL:0002393!2.53e-13!9;CL:0002397!2.53e-13!9;CL:0000081!2.80e-11!11;CL:0000134!4.96e-08!358;CL:0002320!5.13e-08!365;CL:0000775!9.06e-08!3;CL:0000842!3.91e-07!3 | |ontology_enrichment_celltype=CL:0002057!4.78e-75!42;CL:0000860!4.00e-69!45;CL:0000766!1.73e-55!76;CL:0002194!8.21e-47!63;CL:0000576!8.21e-47!63;CL:0000040!8.21e-47!63;CL:0000559!8.21e-47!63;CL:0002009!5.59e-45!65;CL:0000839!7.46e-41!70;CL:0000557!4.25e-40!71;CL:0000763!7.58e-36!112;CL:0000049!7.58e-36!112;CL:0000738!1.23e-32!140;CL:0002087!5.81e-28!119;CL:0000037!1.21e-25!172;CL:0000566!1.21e-25!172;CL:0002032!1.14e-23!165;CL:0000837!1.14e-23!165;CL:0000988!2.59e-23!182;CL:0002031!3.87e-22!124;CL:0000094!3.60e-16!8;CL:0002393!2.53e-13!9;CL:0002397!2.53e-13!9;CL:0000081!2.80e-11!11;CL:0000134!4.96e-08!358;CL:0002320!5.13e-08!365;CL:0000775!9.06e-08!3;CL:0000842!3.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.14e-81;33!CL:0002057;4.14e-81;33!CL:0000473;4.02e-57;39!CL:0000234;4.02e-57;39!CL:0000576;7.72e-54;48!CL:0000766;5.79e-37;69!CL:0000763;1.66e-15;100!CL:0002087;7.20e-15;104!CL:0002393;1.15e-14;6!CL:0002397;1.15e-14;6!CL:0000775;2.40e-12;3!CL:0000094;6.46e-12;8!CL:0000738;4.01e-11;136!CL:0000226;4.84e-11;3!CL:0000842;4.84e-11;3!CL:0000771;1.13e-08;2!CL:0000081;1.49e-08;11!CL:0000988;2.34e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-101,42;CL:0002057,1.68e-101,42;CL:0000473,1.13e-87,48;CL:0000234,1.13e-87,48;CL:0000766,1.86e-73,72;CL:0002194,2.60e-68,59;CL:0000576,2.60e-68,59;CL:0000040,2.60e-68,59;CL:0000559,2.60e-68,59;CL:0002009,8.17e-66,61;CL:0000839,3.20e-60,66;CL:0000557,3.35e-59,67;CL:0000763,6.83e-46,108;CL:0000049,6.83e-46,108;CL:0000738,5.02e-45,136;CL:0002087,9.76e-42,115;CL:0000037,1.77e-34,168;CL:0002031,4.09e-33,120;CL:0000988,3.41e-32,177;CL:0002032,6.80e-31,161;CL:0000837,6.80e-31,161;CL:0000134,3.34e-14,354;CL:0002320,1.03e-13,361;CL:0002393,2.67e-13,9;CL:0002397,2.67e-13,9;CL:0000775,2.32e-12,3;CL:0000219,5.53e-12,386;CL:0000094,6.54e-12,8;CL:0000226,2.92e-11,3;CL:0000842,2.92e-11,3;CL:0000048,7.12e-10,427;CL:0000723,1.39e-09,433;CL:0000034,3.30e-09,441;CL:0000771,1.20e-08,2;CL:0000081,1.50e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.73e-73;42!CL:0000049;1.93e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.51e-44!102;UBERON:0003061!5.51e-44!102;UBERON:0002193!2.00e-40!112;UBERON:0002371!3.76e-34!80;UBERON:0001474!7.01e-31!86;UBERON:0002405!2.17e-27!115;UBERON:0004765!1.01e-25!101;UBERON:0001434!1.01e-25!101;UBERON:0003081!1.42e-15!216;UBERON:0002204!8.46e-11!167;UBERON:0000178!1.89e-09!15;UBERON:0000179!1.89e-09!15;UBERON:0000463!1.89e-09!15;UBERON:0002384!2.21e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!5.51e-44!102;UBERON:0003061!5.51e-44!102;UBERON:0002193!2.00e-40!112;UBERON:0002371!3.76e-34!80;UBERON:0001474!7.01e-31!86;UBERON:0002405!2.17e-27!115;UBERON:0004765!1.01e-25!101;UBERON:0001434!1.01e-25!101;UBERON:0003081!1.42e-15!216;UBERON:0002204!8.46e-11!167;UBERON:0000178!1.89e-09!15;UBERON:0000179!1.89e-09!15;UBERON:0000463!1.89e-09!15;UBERON:0002384!2.21e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.46e-10;15!UBERON:0000179;2.46e-10;15!UBERON:0000463;2.46e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-56,98;UBERON:0003061,1.83e-56,98;UBERON:0002193,5.66e-53,108;UBERON:0002371,3.24e-51,76;UBERON:0001474,7.43e-47,82;UBERON:0002405,8.16e-43,93;UBERON:0004765,6.16e-42,90;UBERON:0001434,6.92e-37,100;UBERON:0003081,3.88e-22,203;UBERON:0002204,1.32e-18,167;UBERON:0002384,4.83e-13,371;UBERON:0000926,9.72e-11,315;UBERON:0004120,9.72e-11,315;UBERON:0006603,9.72e-11,315;UBERON:0000178,1.81e-10,15;UBERON:0000179,1.81e-10,15;UBERON:0000463,1.81e-10,15 | |||
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| ||
|short_description=p@chr17:76409198..76409218,- | |short_description=p@chr17:76409198..76409218,- | ||
}} | }} |
Latest revision as of 22:01, 25 July 2015
Short description: | p@chr17:76409198..76409218, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76409198..76409218, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-56 | 98 |
blood island | 1.83e-56 | 98 |
hemolymphoid system | 5.66e-53 | 108 |
bone marrow | 3.24e-51 | 76 |
bone element | 7.43e-47 | 82 |
immune system | 8.16e-43 | 93 |
skeletal element | 6.16e-42 | 90 |
skeletal system | 6.92e-37 | 100 |
lateral plate mesoderm | 3.88e-22 | 203 |
musculoskeletal system | 1.32e-18 | 167 |
connective tissue | 4.83e-13 | 371 |
mesoderm | 9.72e-11 | 315 |
mesoderm-derived structure | 9.72e-11 | 315 |
presumptive mesoderm | 9.72e-11 | 315 |
blood | 1.81e-10 | 15 |
haemolymphatic fluid | 1.81e-10 | 15 |
organism substance | 1.81e-10 | 15 |