FFCP PHASE1:Hg19::chr18:47018784..47018858,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100526842,6139 | |EntrezGene=100526842,6139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10307 | |HGNC=10307 | ||
|TSSclassifier=strong | |||
|UniProt=B4E3C2,P18621 | |UniProt=B4E3C2,P18621 | ||
|association_with_transcript=0bp_to_ENST00000332968,NM_001199341,NM_001199342,NM_001199343,NM_001199344_5end | |association_with_transcript=0bp_to_ENST00000332968,NM_001199341,NM_001199342,NM_001199343,NM_001199344_5end | ||
|cluster_id=chr18:47018784..47018858,- | |||
|coexpression_cluster_id=C2409 | |||
|description=CAGE_peak_1_at_RPL17_5end | |description=CAGE_peak_1_at_RPL17_5end | ||
|id=chr18:47018784..47018858,- | |id=chr18:47018784..47018858,- | ||
|ontology_enrichment_celltype=CL:0000548!7.37e-50!679;CL:0000004!7.37e-50!679;CL:0000255!7.37e-50!679;CL:0000012!7.98e-50!682;CL:0000144!3.27e-37!625;CL:0000003!4.84e-32!722;CL:0002321!7.70e-32!248;CL:0000220!3.62e-31!246;CL:0002371!8.75e-29!591;CL:0000222!2.50e-21!119;CL:0000055!1.79e-20!180;CL:0000066!4.75e-20!254;CL:0000063!2.57e-18!578;CL:0000680!3.80e-14!57;CL:0000056!3.80e-14!57;CL:0000355!3.80e-14!57;CL:0000393!4.92e-14!60;CL:0000211!4.92e-14!60;CL:0000187!1.12e-13!54;CL:0000183!1.84e-13!59;CL:0000192!1.58e-11!42;CL:0000514!1.58e-11!42;CL:0000359!1.09e-09!32;CL:0000076!3.97e-09!62;CL:0000034!1.44e-07!444;CL:0000213!2.88e-07!57;CL:0000215!2.88e-07!57;CL:0000071!4.49e-07!18;CL:0002546!4.49e-07!18;CL:0000723!5.60e-07!436 | |ontology_enrichment_celltype=CL:0000548!7.37e-50!679;CL:0000004!7.37e-50!679;CL:0000255!7.37e-50!679;CL:0000012!7.98e-50!682;CL:0000144!3.27e-37!625;CL:0000003!4.84e-32!722;CL:0002321!7.70e-32!248;CL:0000220!3.62e-31!246;CL:0002371!8.75e-29!591;CL:0000222!2.50e-21!119;CL:0000055!1.79e-20!180;CL:0000066!4.75e-20!254;CL:0000063!2.57e-18!578;CL:0000680!3.80e-14!57;CL:0000056!3.80e-14!57;CL:0000355!3.80e-14!57;CL:0000393!4.92e-14!60;CL:0000211!4.92e-14!60;CL:0000187!1.12e-13!54;CL:0000183!1.84e-13!59;CL:0000192!1.58e-11!42;CL:0000514!1.58e-11!42;CL:0000359!1.09e-09!32;CL:0000076!3.97e-09!62;CL:0000034!1.44e-07!444;CL:0000213!2.88e-07!57;CL:0000215!2.88e-07!57;CL:0000071!4.49e-07!18;CL:0002546!4.49e-07!18;CL:0000723!5.60e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.84e-09;32!CL:0000187;3.86e-08;55!CL:0000192;9.06e-08;43!CL:0000071;4.47e-07;18!CL:0000393;7.30e-07;61!CL:0000211;7.30e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.68e-32,250;CL:0000222,3.28e-21,121;CL:0000066,2.09e-20,253;CL:0000680,1.75e-13,58;CL:0000056,1.75e-13,58;CL:0000355,1.75e-13,58;CL:0000393,2.14e-13,61;CL:0000211,2.14e-13,61;CL:0000187,5.23e-13,55;CL:0000192,7.74e-11,43;CL:0000514,7.74e-11,43;CL:0000359,1.09e-09,32;CL:0000076,3.05e-09,63;CL:0000213,1.28e-07,58;CL:0000215,1.28e-07,58;CL:0000071,4.49e-07,18;CL:0002546,4.49e-07,18;CL:0000034,8.58e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;9.06e-08;43!CL:0000355;1.52e-07;58!CL:0002546;4.47e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!1.52e-11!239;DOID:162!3.69e-11!235 | |ontology_enrichment_disease=DOID:14566!1.52e-11!239;DOID:162!3.69e-11!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.52e-11,239;DOID:162,3.69e-11,235 | |||
|ontology_enrichment_uberon=UBERON:0000486!7.22e-15!82;UBERON:0004290!3.70e-14!70;UBERON:0000914!4.12e-14!83;UBERON:0002329!4.12e-14!83;UBERON:0003077!4.12e-14!83;UBERON:0003059!4.12e-14!83;UBERON:0007282!4.12e-14!83;UBERON:0009618!4.12e-14!83;UBERON:0007285!4.12e-14!83;UBERON:0005256!1.76e-12!143;UBERON:0000490!2.16e-12!138;UBERON:0002049!2.80e-12!79;UBERON:0007798!2.80e-12!79;UBERON:0001134!1.73e-11!61;UBERON:0002036!1.73e-11!61;UBERON:0003082!1.73e-11!61;UBERON:0003104!6.77e-11!238;UBERON:0009142!6.77e-11!238;UBERON:0003914!9.79e-11!118;UBERON:0001981!1.08e-10!60;UBERON:0007500!1.08e-10!60;UBERON:0004537!1.08e-10!60;UBERON:0006965!1.08e-10!60;UBERON:0001637!1.48e-10!42;UBERON:0003509!1.48e-10!42;UBERON:0004572!1.48e-10!42;UBERON:0002100!1.89e-10!216;UBERON:0000055!2.18e-10!69;UBERON:0002385!3.19e-10!63;UBERON:0001015!3.19e-10!63;UBERON:0000383!3.19e-10!63;UBERON:0004872!4.96e-09!84;UBERON:0004573!1.80e-07!33;UBERON:0004571!1.80e-07!33;UBERON:0001986!4.49e-07!18;UBERON:0004638!4.49e-07!18;UBERON:0004852!4.49e-07!18;UBERON:0000487!4.64e-07!22;UBERON:0004535!4.79e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;4.78e-08;56!UBERON:0001981;4.78e-08;56!UBERON:0004537;4.78e-08;56!UBERON:0001637;1.29e-07;42!UBERON:0003509;1.29e-07;42!UBERON:0004572;1.29e-07;42!UBERON:0003914;3.30e-07;74!UBERON:0004638;4.47e-07;18!UBERON:0001986;4.47e-07;18!UBERON:0004852;4.47e-07;18!UBERON:0000487;4.59e-07;22!UBERON:0004573;9.64e-07;33!UBERON:0004571;9.64e-07;33 | |||
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| ||
|short_description=p1@RPL17 | |short_description=p1@RPL17 | ||
}} | }} |
Latest revision as of 17:35, 19 September 2015
Short description: | p1@RPL17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL17_5end |
Coexpression cluster: | C2409_embryonic_Mallassezderived_acute_Endothelial_Smooth_mucinous_iPS |
Association with transcript: | 0bp_to_ENST00000332968, NM_001199341, NM_001199342, NM_001199343, NM_001199344_5end |
EntrezGene: | 100526842,6139 |
HGNC: | 10307 |
UniProt: | B4E3C2P18621 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.68e-32 | 250 |
mesodermal cell | 3.28e-21 | 121 |
epithelial cell | 2.09e-20 | 253 |
muscle precursor cell | 1.75e-13 | 58 |
myoblast | 1.75e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-13 | 58 |
electrically responsive cell | 2.14e-13 | 61 |
electrically active cell | 2.14e-13 | 61 |
muscle cell | 5.23e-13 | 55 |
smooth muscle cell | 7.74e-11 | 43 |
smooth muscle myoblast | 7.74e-11 | 43 |
vascular associated smooth muscle cell | 1.09e-09 | 32 |
squamous epithelial cell | 3.05e-09 | 63 |
lining cell | 1.28e-07 | 58 |
barrier cell | 1.28e-07 | 58 |
blood vessel endothelial cell | 4.49e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.49e-07 | 18 |
stem cell | 8.58e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.52e-11 | 239 |
cancer | 3.69e-11 | 235 |