FFCP PHASE1:Hg19::chr19:11532498..11532544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:11532498..11532544,- | |||
|description=CAGE_peak_at_chr19:11532498..11532544,- | |description=CAGE_peak_at_chr19:11532498..11532544,- | ||
|id=chr19:11532498..11532544,- | |id=chr19:11532498..11532544,- | ||
|ontology_enrichment_celltype=CL:0002057!2.43e-11!42;CL:0002009!4.84e-11!65;CL:0002194!4.90e-11!63;CL:0000576!4.90e-11!63;CL:0000040!4.90e-11!63;CL:0000559!4.90e-11!63;CL:0000557!1.35e-10!71;CL:0000839!3.28e-10!70;CL:0000860!8.14e-10!45;CL:0000766!2.49e-09!76;CL:0002087!1.36e-07!119 | |ontology_enrichment_celltype=CL:0002057!2.43e-11!42;CL:0002009!4.84e-11!65;CL:0002194!4.90e-11!63;CL:0000576!4.90e-11!63;CL:0000040!4.90e-11!63;CL:0000559!4.90e-11!63;CL:0000557!1.35e-10!71;CL:0000839!3.28e-10!70;CL:0000860!8.14e-10!45;CL:0000766!2.49e-09!76;CL:0002087!1.36e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.05e-12;5!CL:0000236;8.02e-12;13!CL:0000945;1.41e-08;24!CL:0000039;1.36e-07;7!CL:0000586;1.36e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.40e-13,5;CL:0000236,2.05e-11,14;CL:0000945,6.88e-09,24;CL:0000826,6.88e-09,24;CL:0000039,1.53e-07,7;CL:0000586,1.53e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.00e-29!115;UBERON:0001049!2.48e-13!57;UBERON:0005068!2.48e-13!57;UBERON:0006241!2.48e-13!57;UBERON:0007135!2.48e-13!57;UBERON:0003075!6.99e-13!86;UBERON:0007284!6.99e-13!86;UBERON:0002780!4.32e-12!41;UBERON:0001890!4.32e-12!41;UBERON:0006240!4.32e-12!41;UBERON:0002346!4.62e-12!90;UBERON:0002616!1.26e-11!59;UBERON:0003080!1.58e-11!42;UBERON:0005743!3.56e-11!86;UBERON:0003056!1.25e-10!61;UBERON:0000073!4.86e-10!94;UBERON:0001016!4.86e-10!94;UBERON:0001017!1.21e-09!82;UBERON:0002020!6.44e-09!34;UBERON:0003528!6.44e-09!34;UBERON:0000062!7.32e-09!511;UBERON:0001893!1.02e-08!34;UBERON:0002791!1.99e-08!33;UBERON:0002619!2.13e-08!22;UBERON:0000955!2.24e-08!69;UBERON:0006238!2.24e-08!69;UBERON:0001869!8.45e-08!32;UBERON:0002371!8.56e-08!80;UBERON:0002390!1.29e-07!102;UBERON:0003061!1.29e-07!102;UBERON:0001950!2.73e-07!20;UBERON:0002405!6.32e-07!115;UBERON:0000153!6.76e-07!129;UBERON:0007811!6.76e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.16e-07;3!UBERON:0005290;5.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.57e-08,56;UBERON:0005068,3.57e-08,56;UBERON:0006241,3.57e-08,56;UBERON:0007135,3.57e-08,56;UBERON:0000073,9.83e-08,53;UBERON:0002616,9.83e-08,53;UBERON:0007023,4.05e-07,114;UBERON:0001896,4.85e-07,3;UBERON:0005290,4.85e-07,3;UBERON:0010096,4.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,3.58264758783879,0.647787332037959,2.31818010870768,0.872389432677388,0,0.242584061187816,1.16214518452842,0,0,0.28769239232215,1.5369642391746,1.41889337933151,1.03423704220986,0,1.35426486594342,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.398927315243264,0,0.290209238628584,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,0.434377689410233,0.605399502633369,0,0.316462387440884,0.422510572623884,1.06302149982522,0.838634582033504,0.44931452458598,1.20141514273205,0.64290234678832,1.14005097496499,1.19350006319454,0.91332076882317,5.27988733383968,1.63841583378639,0,2.13365111283254,1.60158394814405,1.72425731986345,1.32208974556972,1.90810750907073,2.84606484554724,0,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0,0,2.43317435151318,0.0945348171640679,0,0,0.785874452986276,0.728590576585084,0,1.62273696827342,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,1.54988671763648,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,6.95250124938694,3.31324420803713,6.27447291495399,4.76840853070704,5.80337957013945,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.579652024875384,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0.576479813667846,0.37872730027914,0.190493682876507,0.381988425558278,0,1.71072446022705,0.308482478109971,5.1058319833466,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,3.25572963234866,0.823240336780769,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,1.03384013061444,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,1.00119938235739,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,2.49322802678617,0.447749509444357,0,0,0.769350375349168,0.328014645699706,0.976135183992909,0.824328093181778,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0.894704431569664,1.00109485027145,0,0,1.23087398947712,0,0,0,0,0.73254089635947,0,0,0,1.67121139316383,0,0.921482106297696,1.9882952955326,1.1253553312841,0,0,0,0.996239941255349,0,0,0,1.10776324914963,0,0,0.179021174675609,3.06943422136123,0.394573622547734,0,0,0,0.927680981618513,0,0,0,0,0,4.57656570526979,0,0,0,0,0,1.80894657938112,0,0.110579259931225,0,0.658156191461918,0,0,0.384751292518985,0,0,3.05175990993225,0.325942115766024,3.19001159731919,0.0915975934018623,2.66517388009317,0,0,0,0.451191321234361,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.67401132980677,0,0.937057782901357,0,0.391329237864179,0,4.3404284313433,0,0,0.758238955541855,0,0.103688191397247,0,0,0,0,13.0920391173705,0,5.0332324117188,0,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.443175571691151,0.586654148204409,1.28254112402454,0.213452994739353,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,1.67569440763353,0.229160424011684,0,0.399358000997982,1.28767814440971,0.669514372325618,0.268733889946905,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,1.63444087333891,7.5553979778559,10.1779183081953,17.4484941972258,0,0.77380195455795,0.425246896606173,0,0.630445658393585,0.314727528809989,0.422401346077626,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0.58620893471233,1.32506888912221,0.646414781807753,1.05786081394152,0,0,0.320362237703084,0.157204305099666,0,0.992332043623902,0.395223263795889,0.243585196761792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|short_description=p@chr19:11532498..11532544,- | |short_description=p@chr19:11532498..11532544,- | ||
}} | }} |
Latest revision as of 03:29, 26 July 2015
Short description: | p@chr19:11532498..11532544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11532498..11532544, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.40e-13 | 5 |
B cell | 2.05e-11 | 14 |
lymphocyte of B lineage | 6.88e-09 | 24 |
pro-B cell | 6.88e-09 | 24 |
germ line cell | 1.53e-07 | 7 |
germ cell | 1.53e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.57e-08 | 56 |
neural rod | 3.57e-08 | 56 |
future spinal cord | 3.57e-08 | 56 |
neural keel | 3.57e-08 | 56 |
regional part of nervous system | 9.83e-08 | 53 |
regional part of brain | 9.83e-08 | 53 |
adult organism | 4.05e-07 | 114 |
medulla oblongata | 4.85e-07 | 3 |
myelencephalon | 4.85e-07 | 3 |
future myelencephalon | 4.85e-07 | 3 |