FFCP PHASE1:Hg19::chr19:1568301..1568351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399664 | |EntrezGene=399664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16734 | |HGNC=16734 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAL6,Q86XN8 | |UniProt=E9PAL6,Q86XN8 | ||
|association_with_transcript=-244bp_to_ENST00000388824,ENST00000402693,NM_001174118,NM_203304,uc010dsn.2_5end | |association_with_transcript=-244bp_to_ENST00000388824,ENST00000402693,NM_001174118,NM_203304,uc010dsn.2_5end | ||
|cluster_id=chr19:1568301..1568351,- | |||
|description=CAGE_peak_1_at_MEX3D_5end | |description=CAGE_peak_1_at_MEX3D_5end | ||
|id=chr19:1568301..1568351,- | |id=chr19:1568301..1568351,- | ||
|ontology_enrichment_celltype=CL:0002321!5.94e-33!248;CL:0000220!5.39e-32!246;CL:0000066!1.56e-25!254;CL:0000222!1.94e-16!119;CL:0002078!6.25e-15!44;CL:0000115!1.61e-14!35;CL:0000213!3.93e-14!57;CL:0000215!3.93e-14!57;CL:0002139!2.20e-13!24;CL:0000055!3.01e-13!180;CL:0000071!4.10e-11!18;CL:0002546!4.10e-11!18;CL:1000449!2.76e-09!16;CL:0000076!6.52e-09!62;CL:0000221!1.77e-08!71;CL:0000133!3.44e-08!59;CL:1000497!8.03e-08!18;CL:0002518!8.03e-08!18;CL:0002681!9.05e-08!13;CL:0002584!9.05e-08!13;CL:0002319!4.70e-07!25;CL:1000507!6.06e-07!12;CL:1000494!6.06e-07!12 | |ontology_enrichment_celltype=CL:0002321!5.94e-33!248;CL:0000220!5.39e-32!246;CL:0000066!1.56e-25!254;CL:0000222!1.94e-16!119;CL:0002078!6.25e-15!44;CL:0000115!1.61e-14!35;CL:0000213!3.93e-14!57;CL:0000215!3.93e-14!57;CL:0002139!2.20e-13!24;CL:0000055!3.01e-13!180;CL:0000071!4.10e-11!18;CL:0002546!4.10e-11!18;CL:1000449!2.76e-09!16;CL:0000076!6.52e-09!62;CL:0000221!1.77e-08!71;CL:0000133!3.44e-08!59;CL:1000497!8.03e-08!18;CL:0002518!8.03e-08!18;CL:0002681!9.05e-08!13;CL:0002584!9.05e-08!13;CL:0002319!4.70e-07!25;CL:1000507!6.06e-07!12;CL:1000494!6.06e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.80e-13;24!CL:0000115;1.23e-12;36!CL:0000071;3.43e-11;18!CL:0002078;1.78e-10;45!CL:1000449;1.40e-09;15!CL:0000213;3.85e-09;58!CL:0000215;3.85e-09;58!CL:0002681;4.41e-08;12!CL:0002584;4.41e-08;12!CL:1000497;6.21e-08;17!CL:0002518;6.21e-08;17!CL:0000349;3.08e-07;19!CL:0002319;4.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.24e-33,250;CL:0000066,2.98e-25,253;CL:0000222,8.18e-17,121;CL:0002078,2.55e-15,45;CL:0000115,6.69e-15,36;CL:0000213,1.64e-14,58;CL:0000215,1.64e-14,58;CL:0002139,1.98e-13,24;CL:0000071,3.76e-11,18;CL:0002546,3.76e-11,18;CL:1000449,1.33e-09,15;CL:0000076,2.31e-08,63;CL:0000133,3.24e-08,59;CL:0002681,4.39e-08,12;CL:0002584,4.39e-08,12;CL:1000497,5.04e-08,17;CL:0002518,5.04e-08,17;CL:0000221,5.37e-08,72;CL:0000349,2.42e-07,19;CL:0002319,4.47e-07,25;CL:1000507,9.18e-07,10;CL:1000494,9.18e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;3.43e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.07e-17!312;UBERON:0000483!6.48e-17!309;UBERON:0003914!1.77e-15!118;UBERON:0000468!6.75e-14!659;UBERON:0004111!9.04e-13!241;UBERON:0000475!2.17e-12!365;UBERON:0002049!3.25e-12!79;UBERON:0007798!3.25e-12!79;UBERON:0006914!4.51e-12!25;UBERON:0000487!4.57e-12!22;UBERON:0000490!2.04e-11!138;UBERON:0002100!3.48e-11!216;UBERON:0001986!4.10e-11!18;UBERON:0004638!4.10e-11!18;UBERON:0004852!4.10e-11!18;UBERON:0005256!5.11e-11!143;UBERON:0000055!5.38e-11!69;UBERON:0000477!9.37e-11!286;UBERON:0000481!1.23e-10!347;UBERON:0000922!1.71e-10!612;UBERON:0001008!3.84e-10!45;UBERON:0006554!4.71e-10!44;UBERON:0001981!1.66e-09!60;UBERON:0007500!1.66e-09!60;UBERON:0004537!1.66e-09!60;UBERON:0006965!1.66e-09!60;UBERON:0000467!1.89e-09!625;UBERON:0006555!2.37e-09!17;UBERON:0005103!2.37e-09!17;UBERON:0000083!2.37e-09!17;UBERON:0009201!2.37e-09!17;UBERON:0004819!2.37e-09!17;UBERON:0006553!2.37e-09!17;UBERON:0003074!2.37e-09!17;UBERON:0003060!2.37e-09!17;UBERON:0000025!2.68e-09!194;UBERON:0004211!2.76e-09!16;UBERON:0001285!2.76e-09!16;UBERON:0007684!2.76e-09!16;UBERON:0003220!2.76e-09!16;UBERON:0004208!2.76e-09!16;UBERON:0000480!3.05e-09!626;UBERON:0000353!7.67e-09!17;UBERON:0002050!8.34e-09!605;UBERON:0005423!8.34e-09!605;UBERON:0003104!1.17e-08!238;UBERON:0009142!1.17e-08!238;UBERON:0000923!1.30e-08!604;UBERON:0005291!1.30e-08!604;UBERON:0006598!1.30e-08!604;UBERON:0002532!1.30e-08!604;UBERON:0000080!1.48e-08!18;UBERON:0002120!1.48e-08!18;UBERON:0004875!1.48e-08!18;UBERON:0005721!1.48e-08!18;UBERON:0005754!1.48e-08!18;UBERON:0007297!1.48e-08!18;UBERON:0004872!1.80e-08!84;UBERON:0000064!3.10e-08!219;UBERON:0009569!3.61e-08!113;UBERON:0000058!6.96e-08!26;UBERON:0002113!7.33e-08!27;UBERON:0003918!7.33e-08!27;UBERON:0005095!7.33e-08!27;UBERON:0007687!7.33e-08!27;UBERON:0005631!8.37e-08!14;UBERON:0000158!8.37e-08!14;UBERON:0001225!9.05e-08!13;UBERON:0008987!9.05e-08!13;UBERON:0004876!1.08e-07!20;UBERON:0003064!1.12e-07!37;UBERON:0000489!1.37e-07!32;UBERON:0005172!3.24e-07!55;UBERON:0005173!3.24e-07!55;UBERON:0009773!6.06e-07!12;UBERON:0001231!6.06e-07!12;UBERON:0004810!6.06e-07!12;UBERON:0005177!9.27e-07!107 | |ontology_enrichment_uberon=UBERON:0000119!2.07e-17!312;UBERON:0000483!6.48e-17!309;UBERON:0003914!1.77e-15!118;UBERON:0000468!6.75e-14!659;UBERON:0004111!9.04e-13!241;UBERON:0000475!2.17e-12!365;UBERON:0002049!3.25e-12!79;UBERON:0007798!3.25e-12!79;UBERON:0006914!4.51e-12!25;UBERON:0000487!4.57e-12!22;UBERON:0000490!2.04e-11!138;UBERON:0002100!3.48e-11!216;UBERON:0001986!4.10e-11!18;UBERON:0004638!4.10e-11!18;UBERON:0004852!4.10e-11!18;UBERON:0005256!5.11e-11!143;UBERON:0000055!5.38e-11!69;UBERON:0000477!9.37e-11!286;UBERON:0000481!1.23e-10!347;UBERON:0000922!1.71e-10!612;UBERON:0001008!3.84e-10!45;UBERON:0006554!4.71e-10!44;UBERON:0001981!1.66e-09!60;UBERON:0007500!1.66e-09!60;UBERON:0004537!1.66e-09!60;UBERON:0006965!1.66e-09!60;UBERON:0000467!1.89e-09!625;UBERON:0006555!2.37e-09!17;UBERON:0005103!2.37e-09!17;UBERON:0000083!2.37e-09!17;UBERON:0009201!2.37e-09!17;UBERON:0004819!2.37e-09!17;UBERON:0006553!2.37e-09!17;UBERON:0003074!2.37e-09!17;UBERON:0003060!2.37e-09!17;UBERON:0000025!2.68e-09!194;UBERON:0004211!2.76e-09!16;UBERON:0001285!2.76e-09!16;UBERON:0007684!2.76e-09!16;UBERON:0003220!2.76e-09!16;UBERON:0004208!2.76e-09!16;UBERON:0000480!3.05e-09!626;UBERON:0000353!7.67e-09!17;UBERON:0002050!8.34e-09!605;UBERON:0005423!8.34e-09!605;UBERON:0003104!1.17e-08!238;UBERON:0009142!1.17e-08!238;UBERON:0000923!1.30e-08!604;UBERON:0005291!1.30e-08!604;UBERON:0006598!1.30e-08!604;UBERON:0002532!1.30e-08!604;UBERON:0000080!1.48e-08!18;UBERON:0002120!1.48e-08!18;UBERON:0004875!1.48e-08!18;UBERON:0005721!1.48e-08!18;UBERON:0005754!1.48e-08!18;UBERON:0007297!1.48e-08!18;UBERON:0004872!1.80e-08!84;UBERON:0000064!3.10e-08!219;UBERON:0009569!3.61e-08!113;UBERON:0000058!6.96e-08!26;UBERON:0002113!7.33e-08!27;UBERON:0003918!7.33e-08!27;UBERON:0005095!7.33e-08!27;UBERON:0007687!7.33e-08!27;UBERON:0005631!8.37e-08!14;UBERON:0000158!8.37e-08!14;UBERON:0001225!9.05e-08!13;UBERON:0008987!9.05e-08!13;UBERON:0004876!1.08e-07!20;UBERON:0003064!1.12e-07!37;UBERON:0000489!1.37e-07!32;UBERON:0005172!3.24e-07!55;UBERON:0005173!3.24e-07!55;UBERON:0009773!6.06e-07!12;UBERON:0001231!6.06e-07!12;UBERON:0004810!6.06e-07!12;UBERON:0005177!9.27e-07!107 | ||
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| ||
|short_description=p1@MEX3D | |short_description=p1@MEX3D | ||
}} | }} |
Latest revision as of 07:57, 16 September 2015
Short description: | p1@MEX3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEX3D_5end |
Coexpression cluster: | NA |
Association with transcript: | -244bp_to_ENST00000388824, ENST00000402693, NM_001174118, NM_203304, uc010dsn.2_5end |
EntrezGene: | MEX3D |
HGNC: | 16734 |
UniProt: | E9PAL6Q86XN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.24e-33 | 250 |
epithelial cell | 2.98e-25 | 253 |
mesodermal cell | 8.18e-17 | 121 |
meso-epithelial cell | 2.55e-15 | 45 |
endothelial cell | 6.69e-15 | 36 |
lining cell | 1.64e-14 | 58 |
barrier cell | 1.64e-14 | 58 |
endothelial cell of vascular tree | 1.98e-13 | 24 |
blood vessel endothelial cell | 3.76e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.76e-11 | 18 |
epithelial cell of nephron | 1.33e-09 | 15 |
squamous epithelial cell | 2.31e-08 | 63 |
neurectodermal cell | 3.24e-08 | 59 |
kidney cortical cell | 4.39e-08 | 12 |
renal cortical epithelial cell | 4.39e-08 | 12 |
kidney cell | 5.04e-08 | 17 |
kidney epithelial cell | 5.04e-08 | 17 |
ectodermal cell | 5.37e-08 | 72 |
extraembryonic cell | 2.42e-07 | 19 |
neural cell | 4.47e-07 | 25 |
kidney tubule cell | 9.18e-07 | 10 |
nephron tubule epithelial cell | 9.18e-07 | 10 |