FFCP PHASE1:Hg19::chr12:12764773..12764852,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:12764773..12764852,+
|short_description=p1@CREBL2
|description=CAGE_peak_1_at_CREBL2_5end
|association_with_transcript=0bp_to_ENST00000228865,NM_001310,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1389 | |EntrezGene=1389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2350 | |HGNC=2350 | ||
|TSSclassifier=strong | |||
|UniProt=O60519 | |UniProt=O60519 | ||
|association_with_transcript=0bp_to_ENST00000228865,NM_001310,uc001rap.1_5end | |||
|cluster_id=chr12:12764773..12764852,+ | |||
|description=CAGE_peak_1_at_CREBL2_5end | |||
|id=chr12:12764773..12764852,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-39!115;UBERON:0001049!1.15e-19!57;UBERON:0005068!1.15e-19!57;UBERON:0006241!1.15e-19!57;UBERON:0007135!1.15e-19!57;UBERON:0003080!1.81e-17!42;UBERON:0002616!1.94e-17!59;UBERON:0002780!5.90e-17!41;UBERON:0001890!5.90e-17!41;UBERON:0006240!5.90e-17!41;UBERON:0000955!5.43e-14!69;UBERON:0006238!5.43e-14!69;UBERON:0002020!2.35e-13!34;UBERON:0003528!2.35e-13!34;UBERON:0001893!4.26e-13!34;UBERON:0002791!1.22e-12!33;UBERON:0001869!1.70e-12!32;UBERON:0005743!7.33e-12!86;UBERON:0000073!8.81e-12!94;UBERON:0001016!8.81e-12!94;UBERON:0003075!1.58e-11!86;UBERON:0007284!1.58e-11!86;UBERON:0001017!5.88e-11!82;UBERON:0002346!1.58e-10!90;UBERON:0003056!2.27e-10!61;UBERON:0002619!3.43e-10!22;UBERON:0001950!3.06e-09!20;UBERON:0000956!5.26e-09!25;UBERON:0000203!5.26e-09!25;UBERON:0000033!1.93e-08!123;UBERON:0000153!3.09e-08!129;UBERON:0007811!3.09e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.16e-12;41!UBERON:0001890;2.16e-12;41!UBERON:0001893;1.51e-11;34!UBERON:0003528;1.91e-11;34!UBERON:0002020;1.91e-11;34!UBERON:0001869;2.41e-11;32!UBERON:0002791;2.75e-11;32!UBERON:0000073;5.45e-11;53!UBERON:0002616;5.45e-11;53!UBERON:0007023;5.52e-11;114!UBERON:0002619;3.26e-10;22!UBERON:0001950;2.92e-09;20!UBERON:0000956;5.39e-09;25!UBERON:0000203;5.39e-09;25!UBERON:0001017;8.46e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.52e-38,114;UBERON:0001049,3.70e-19,56;UBERON:0005068,3.70e-19,56;UBERON:0006241,3.70e-19,56;UBERON:0007135,3.70e-19,56;UBERON:0000073,2.15e-18,53;UBERON:0002616,2.15e-18,53;UBERON:0002780,5.90e-17,41;UBERON:0001890,5.90e-17,41;UBERON:0003080,5.90e-17,41;UBERON:0006240,5.90e-17,41;UBERON:0000955,1.50e-13,68;UBERON:0006238,1.50e-13,68;UBERON:0003528,2.35e-13,34;UBERON:0002020,2.35e-13,34;UBERON:0001893,4.26e-13,34;UBERON:0001869,1.70e-12,32;UBERON:0002791,2.16e-12,32;UBERON:0003075,6.12e-12,82;UBERON:0007284,6.12e-12,82;UBERON:0002346,7.05e-11,86;UBERON:0001017,1.43e-10,81;UBERON:0001016,1.61e-10,89;UBERON:0002619,3.43e-10,22;UBERON:0003056,4.22e-10,61;UBERON:0001950,3.06e-09,20;UBERON:0000956,5.26e-09,25;UBERON:0000203,5.26e-09,25;UBERON:0010314,3.33e-08,132;UBERON:0010371,1.12e-07,104 | |||
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| ||
|short_description=p1@CREBL2 | |||
}} | }} |
Latest revision as of 06:35, 17 September 2015
Short description: | p1@CREBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CREBL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000228865, NM_001310, uc001rap.1_5end |
EntrezGene: | CREBL2 |
HGNC: | 2350 |
UniProt: | O60519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.52e-38 | 114 |
neural tube | 3.70e-19 | 56 |
neural rod | 3.70e-19 | 56 |
future spinal cord | 3.70e-19 | 56 |
neural keel | 3.70e-19 | 56 |
regional part of nervous system | 2.15e-18 | 53 |
regional part of brain | 2.15e-18 | 53 |
regional part of forebrain | 5.90e-17 | 41 |
forebrain | 5.90e-17 | 41 |
anterior neural tube | 5.90e-17 | 41 |
future forebrain | 5.90e-17 | 41 |
brain | 1.50e-13 | 68 |
future brain | 1.50e-13 | 68 |
brain grey matter | 2.35e-13 | 34 |
gray matter | 2.35e-13 | 34 |
telencephalon | 4.26e-13 | 34 |
cerebral hemisphere | 1.70e-12 | 32 |
regional part of telencephalon | 2.16e-12 | 32 |
neural plate | 6.12e-12 | 82 |
presumptive neural plate | 6.12e-12 | 82 |
neurectoderm | 7.05e-11 | 86 |
central nervous system | 1.43e-10 | 81 |
nervous system | 1.61e-10 | 89 |
regional part of cerebral cortex | 3.43e-10 | 22 |
pre-chordal neural plate | 4.22e-10 | 61 |
neocortex | 3.06e-09 | 20 |
cerebral cortex | 5.26e-09 | 25 |
pallium | 5.26e-09 | 25 |
structure with developmental contribution from neural crest | 3.33e-08 | 132 |
ecto-epithelium | 1.12e-07 | 104 |