FFCP PHASE1:Hg19::chr1:156125842..156125853,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64218 | |EntrezGene=64218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |HGNC=10729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-362bp_to_ENST00000487358_5end | |association_with_transcript=-362bp_to_ENST00000487358_5end | ||
|cluster_id=chr1:156125842..156125853,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_13_at_SEMA4A_5end | |description=CAGE_peak_13_at_SEMA4A_5end | ||
|id=chr1:156125842..156125853,+ | |id=chr1:156125842..156125853,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.41e-63!140;CL:0002057!7.58e-63!42;CL:0000860!5.03e-58!45;CL:0000037!2.80e-54!172;CL:0000566!2.80e-54!172;CL:0002087!6.89e-51!119;CL:0000988!1.76e-50!182;CL:0000766!2.99e-47!76;CL:0002032!9.94e-47!165;CL:0000837!9.94e-47!165;CL:0002009!6.06e-45!65;CL:0002031!6.52e-44!124;CL:0002194!9.09e-44!63;CL:0000576!9.09e-44!63;CL:0000040!9.09e-44!63;CL:0000559!9.09e-44!63;CL:0000557!8.05e-43!71;CL:0000839!6.67e-41!70;CL:0000763!9.58e-40!112;CL:0000049!9.58e-40!112;CL:0000134!3.52e-19!358;CL:0002320!1.61e-18!365;CL:0000219!3.46e-16!390;CL:0000048!2.10e-13!430;CL:0000034!2.66e-13!444;CL:0000723!5.23e-13!436;CL:0000784!1.34e-09!3;CL:0000842!2.29e-09!3;CL:0000623!1.02e-08!3;CL:0000825!1.02e-08!3;CL:0000451!1.33e-08!10;CL:0002393!3.56e-08!9;CL:0002397!3.56e-08!9;CL:0000542!2.11e-07!53;CL:0000051!2.11e-07!53;CL:0000224!4.17e-07!4;CL:0000063!4.43e-07!578 | |ontology_enrichment_celltype=CL:0000738!5.41e-63!140;CL:0002057!7.58e-63!42;CL:0000860!5.03e-58!45;CL:0000037!2.80e-54!172;CL:0000566!2.80e-54!172;CL:0002087!6.89e-51!119;CL:0000988!1.76e-50!182;CL:0000766!2.99e-47!76;CL:0002032!9.94e-47!165;CL:0000837!9.94e-47!165;CL:0002009!6.06e-45!65;CL:0002031!6.52e-44!124;CL:0002194!9.09e-44!63;CL:0000576!9.09e-44!63;CL:0000040!9.09e-44!63;CL:0000559!9.09e-44!63;CL:0000557!8.05e-43!71;CL:0000839!6.67e-41!70;CL:0000763!9.58e-40!112;CL:0000049!9.58e-40!112;CL:0000134!3.52e-19!358;CL:0002320!1.61e-18!365;CL:0000219!3.46e-16!390;CL:0000048!2.10e-13!430;CL:0000034!2.66e-13!444;CL:0000723!5.23e-13!436;CL:0000784!1.34e-09!3;CL:0000842!2.29e-09!3;CL:0000623!1.02e-08!3;CL:0000825!1.02e-08!3;CL:0000451!1.33e-08!10;CL:0002393!3.56e-08!9;CL:0002397!3.56e-08!9;CL:0000542!2.11e-07!53;CL:0000051!2.11e-07!53;CL:0000224!4.17e-07!4;CL:0000063!4.43e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-47;33!CL:0002057;6.36e-47;33!CL:0000473;5.05e-39;39!CL:0000234;5.05e-39;39!CL:0000576;1.52e-35;48!CL:0000766;1.03e-23;69!CL:0000784;5.98e-21;3!CL:0002393;4.95e-19;6!CL:0002397;4.95e-19;6!CL:0002087;2.67e-12;104!CL:0000738;3.29e-12;136!CL:0000763;8.91e-12;100!CL:0000226;5.17e-10;3!CL:0000842;5.17e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.18e-68,42;CL:0002057,2.18e-68,42;CL:0000473,1.51e-65,48;CL:0000234,1.51e-65,48;CL:0002194,1.10e-56,59;CL:0000576,1.10e-56,59;CL:0000040,1.10e-56,59;CL:0000559,1.10e-56,59;CL:0002009,1.00e-54,61;CL:0000766,2.44e-50,72;CL:0000839,2.46e-50,66;CL:0000557,1.56e-49,67;CL:0000738,5.18e-35,136;CL:0002087,7.77e-33,115;CL:0000763,2.64e-32,108;CL:0000049,2.64e-32,108;CL:0000037,1.61e-27,168;CL:0002031,5.30e-26,120;CL:0000988,6.78e-26,177;CL:0000784,5.80e-21,3;CL:0002032,2.62e-20,161;CL:0000837,2.62e-20,161;CL:0002393,9.75e-13,9;CL:0002397,9.75e-13,9;CL:0000134,1.31e-10,354;CL:0002320,2.61e-10,361;CL:0000226,3.58e-10,3;CL:0000842,3.58e-10,3;CL:0000219,2.98e-09,386;CL:0000034,1.88e-08,441;CL:0000048,5.92e-08,427;CL:0000723,8.95e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.42e-49;42!CL:0000049;4.18e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.46e-37!80;UBERON:0002390!2.82e-36!102;UBERON:0003061!2.82e-36!102;UBERON:0002193!8.31e-34!112;UBERON:0001474!1.16e-33!86;UBERON:0004765!3.22e-27!101;UBERON:0001434!3.22e-27!101;UBERON:0002405!3.37e-27!115;UBERON:0002384!1.29e-17!375;UBERON:0002204!1.02e-12!167;UBERON:0003081!2.37e-12!216 | |ontology_enrichment_uberon=UBERON:0002371!6.46e-37!80;UBERON:0002390!2.82e-36!102;UBERON:0003061!2.82e-36!102;UBERON:0002193!8.31e-34!112;UBERON:0001474!1.16e-33!86;UBERON:0004765!3.22e-27!101;UBERON:0001434!3.22e-27!101;UBERON:0002405!3.37e-27!115;UBERON:0002384!1.29e-17!375;UBERON:0002204!1.02e-12!167;UBERON:0003081!2.37e-12!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.92e-43,76;UBERON:0001474,7.82e-40,82;UBERON:0002390,3.17e-39,98;UBERON:0003061,3.17e-39,98;UBERON:0004765,5.78e-36,90;UBERON:0002193,3.16e-35,108;UBERON:0002405,1.11e-34,93;UBERON:0001434,5.47e-32,100;UBERON:0002204,1.57e-17,167;UBERON:0003081,9.65e-17,203;UBERON:0002384,6.69e-10,371;UBERON:0000926,3.59e-09,315;UBERON:0004120,3.59e-09,315;UBERON:0006603,3.59e-09,315 | |||
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| ||
|short_description=p13@SEMA4A | |short_description=p13@SEMA4A | ||
}} | }} |
Latest revision as of 15:16, 17 September 2015
Short description: | p13@SEMA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SEMA4A_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -362bp_to_ENST00000487358_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.92e-43 | 76 |
bone element | 7.82e-40 | 82 |
hematopoietic system | 3.17e-39 | 98 |
blood island | 3.17e-39 | 98 |
skeletal element | 5.78e-36 | 90 |
hemolymphoid system | 3.16e-35 | 108 |
immune system | 1.11e-34 | 93 |
skeletal system | 5.47e-32 | 100 |
musculoskeletal system | 1.57e-17 | 167 |
lateral plate mesoderm | 9.65e-17 | 203 |
connective tissue | 6.69e-10 | 371 |
mesoderm | 3.59e-09 | 315 |
mesoderm-derived structure | 3.59e-09 | 315 |
presumptive mesoderm | 3.59e-09 | 315 |