FFCP PHASE1:Hg19::chr5:155211666..155211669,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:155211666..155211669,+ | |||
|description=CAGE_peak_at_chr5:155211666..155211669,+ | |description=CAGE_peak_at_chr5:155211666..155211669,+ | ||
|id=chr5:155211666..155211669,+ | |id=chr5:155211666..155211669,+ | ||
|ontology_enrichment_celltype=CL:0000623!1.03e-08!3;CL:0000825!1.03e-08!3;CL:0000540!3.65e-07!6;CL:0000031!3.65e-07!6;CL:0000404!3.65e-07!6 | |ontology_enrichment_celltype=CL:0000623!1.03e-08!3;CL:0000825!1.03e-08!3;CL:0000540!3.65e-07!6;CL:0000031!3.65e-07!6;CL:0000404!3.65e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.71e-66;1!UBERON:0003056;2.93e-23;3!UBERON:0006238;2.40e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9!DOID:3093;7.70e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.14e-16!90;UBERON:0001893!3.08e-16!34;UBERON:0001869!1.77e-15!32;UBERON:0000073!6.32e-15!94;UBERON:0001016!6.32e-15!94;UBERON:0003075!7.55e-15!86;UBERON:0007284!7.55e-15!86;UBERON:0002791!7.89e-15!33;UBERON:0001049!1.00e-14!57;UBERON:0005068!1.00e-14!57;UBERON:0006241!1.00e-14!57;UBERON:0007135!1.00e-14!57;UBERON:0002780!1.40e-14!41;UBERON:0001890!1.40e-14!41;UBERON:0006240!1.40e-14!41;UBERON:0001017!2.22e-14!82;UBERON:0002020!2.39e-14!34;UBERON:0003528!2.39e-14!34;UBERON:0003080!3.93e-14!42;UBERON:0007023!1.54e-13!115;UBERON:0002619!1.82e-13!22;UBERON:0005743!2.09e-13!86;UBERON:0002616!1.66e-12!59;UBERON:0001950!2.03e-12!20;UBERON:0000956!1.39e-11!25;UBERON:0000203!1.39e-11!25;UBERON:0000955!4.69e-11!69;UBERON:0006238!4.69e-11!69;UBERON:0003056!6.20e-11!61;UBERON:0000924!1.54e-09!173;UBERON:0006601!1.54e-09!173;UBERON:0003978!9.56e-09!3;UBERON:0009751!9.56e-09!3;UBERON:0000946!9.56e-09!3;UBERON:0002523!9.56e-09!3;UBERON:0005983!9.56e-09!3;UBERON:0002165!9.56e-09!3;UBERON:0002062!9.56e-09!3;UBERON:0007280!9.56e-09!3;UBERON:0000349!1.18e-08!5;UBERON:0004121!1.67e-08!169;UBERON:0001871!2.50e-08!7;UBERON:0002420!8.93e-07!9;UBERON:0007245!8.93e-07!9;UBERON:0010009!8.93e-07!9;UBERON:0010011!8.93e-07!9;UBERON:0000454!8.93e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0002331;5.93e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0.675105328965065,0,0.504867548488229,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,2.68623139945635,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0.11294608203896,1.31928620094515,0,0,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr5:155211666..155211669,+ | |short_description=p@chr5:155211666..155211669,+ | ||
}} | }} |
Latest revision as of 12:12, 30 July 2015
Short description: | p@chr5:155211666..155211669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:155211666..155211669, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
nervous system cancer | 7.48e-07 | 11 |