FFCP PHASE1:Hg19::chr12:76897863..76897867,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:76897863..76897867,-
|short_description=p@chr12:76897863..76897867,-
|description=CAGE_peak_at_chr12:76897863..76897867,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:76897863..76897867,- | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_at_chr12:76897863..76897867,- | |||
|id=chr12:76897863..76897867,- | |||
|ontology_enrichment_celltype=CL:0000738!3.84e-17!140;CL:0000037!2.40e-15!172;CL:0000566!2.40e-15!172;CL:0002087!6.52e-15!119;CL:0000988!1.89e-13!182;CL:0002031!3.85e-13!124;CL:0002032!3.88e-12!165;CL:0000837!3.88e-12!165;CL:0000838!8.16e-09!52;CL:0000542!1.62e-08!53;CL:0000051!1.62e-08!53;CL:0002057!1.11e-07!42;CL:0000766!4.94e-07!76;CL:0000860!8.40e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.65e-30;3!CL:0000791;6.50e-27;18!CL:0000789;6.50e-27;18!CL:0002419;6.50e-27;18!CL:0000084;3.31e-19;25!CL:0000624;6.43e-16;6!CL:0002393;7.11e-16;6!CL:0002397;7.11e-16;6!CL:0000625;5.58e-15;11!CL:0000542;4.04e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.48e-30,3;CL:0000825,2.48e-30,3;CL:0000791,7.04e-27,18;CL:0000789,7.04e-27,18;CL:0002420,7.04e-27,18;CL:0002419,7.04e-27,18;CL:0000790,7.04e-27,18;CL:0002087,9.49e-20,115;CL:0000084,3.50e-19,25;CL:0000827,3.50e-19,25;CL:0000838,6.33e-18,52;CL:0000542,1.46e-17,53;CL:0000051,1.46e-17,53;CL:0002031,2.15e-16,120;CL:0000738,2.36e-16,136;CL:0000624,6.12e-16,6;CL:0000625,6.22e-15,11;CL:0000037,8.60e-13,168;CL:0000988,5.10e-12,177;CL:0002032,1.18e-11,161;CL:0000837,1.18e-11,161;CL:0002393,7.90e-11,9;CL:0002397,7.90e-11,9 | |||
|ontology_enrichment_development_v019=CL:0000790;6.50e-27;18!UBERON:0005425;4.01e-11;1!CL:0000051;4.04e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.77e-08!102;UBERON:0003061!1.77e-08!102;UBERON:0002193!2.13e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.01e-11;1!UBERON:0001785;4.01e-11;1!UBERON:0002464;4.01e-11;1!UBERON:0004904;4.01e-11;1!UBERON:0001021;4.01e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.44e-11,1;UBERON:0001785,4.44e-11,1;UBERON:0002464,4.44e-11,1;UBERON:0004904,4.44e-11,1;UBERON:0001021,4.44e-11,1;UBERON:0003902,4.44e-11,1;UBERON:0005425,4.44e-11,1 | |||
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| ||
|short_description=p@chr12:76897863..76897867,- | |||
}} | }} |
Latest revision as of 12:28, 24 July 2015
Short description: | p@chr12:76897863..76897867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76897863..76897867, - |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.48e-30 | 3 |
pro-NK cell | 2.48e-30 | 3 |
mature alpha-beta T cell | 7.04e-27 | 18 |
alpha-beta T cell | 7.04e-27 | 18 |
immature T cell | 7.04e-27 | 18 |
mature T cell | 7.04e-27 | 18 |
immature alpha-beta T cell | 7.04e-27 | 18 |
nongranular leukocyte | 9.49e-20 | 115 |
T cell | 3.50e-19 | 25 |
pro-T cell | 3.50e-19 | 25 |
lymphoid lineage restricted progenitor cell | 6.33e-18 | 52 |
lymphocyte | 1.46e-17 | 53 |
common lymphoid progenitor | 1.46e-17 | 53 |
hematopoietic lineage restricted progenitor cell | 2.15e-16 | 120 |
leukocyte | 2.36e-16 | 136 |
CD4-positive, alpha-beta T cell | 6.12e-16 | 6 |
CD8-positive, alpha-beta T cell | 6.22e-15 | 11 |
hematopoietic stem cell | 8.60e-13 | 168 |
hematopoietic cell | 5.10e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.18e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-11 | 161 |
intermediate monocyte | 7.90e-11 | 9 |
CD14-positive, CD16-positive monocyte | 7.90e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.44e-11 | 1 |
cranial nerve | 4.44e-11 | 1 |
nerve trunk | 4.44e-11 | 1 |
nerve connecting eye with brain | 4.44e-11 | 1 |
nerve | 4.44e-11 | 1 |
retinal neural layer | 4.44e-11 | 1 |
presumptive neural retina | 4.44e-11 | 1 |