FFCP PHASE1:Hg19::chr1:31214479..31214495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:31214479..31214495,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr1:31214479..31214495,+ | |description=CAGE_peak_at_chr1:31214479..31214495,+ | ||
|id=chr1:31214479..31214495,+ | |id=chr1:31214479..31214495,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.18e-62!140;CL:0000037!1.93e-59!172;CL:0000566!1.93e-59!172;CL:0002032!5.08e-59!165;CL:0000837!5.08e-59!165;CL:0000766!1.02e-57!76;CL:0000988!1.59e-56!182;CL:0002087!2.63e-55!119;CL:0002031!3.69e-55!124;CL:0000557!1.44e-53!71;CL:0000839!6.78e-53!70;CL:0002194!4.44e-52!63;CL:0000576!4.44e-52!63;CL:0000040!4.44e-52!63;CL:0000559!4.44e-52!63;CL:0002009!1.35e-51!65;CL:0000763!5.07e-51!112;CL:0000049!5.07e-51!112;CL:0002057!8.46e-46!42;CL:0000860!1.28e-41!45;CL:0000134!6.34e-14!358;CL:0002320!4.66e-13!365;CL:0000219!8.01e-11!390;CL:0000542!1.70e-08!53;CL:0000051!1.70e-08!53;CL:0002393!3.80e-08!9;CL:0002397!3.80e-08!9;CL:0000838!5.21e-08!52;CL:0000945!6.69e-08!24;CL:0000826!6.69e-08!24;CL:0000048!8.33e-08!430;CL:0000723!2.54e-07!436 | |ontology_enrichment_celltype=CL:0000738!3.18e-62!140;CL:0000037!1.93e-59!172;CL:0000566!1.93e-59!172;CL:0002032!5.08e-59!165;CL:0000837!5.08e-59!165;CL:0000766!1.02e-57!76;CL:0000988!1.59e-56!182;CL:0002087!2.63e-55!119;CL:0002031!3.69e-55!124;CL:0000557!1.44e-53!71;CL:0000839!6.78e-53!70;CL:0002194!4.44e-52!63;CL:0000576!4.44e-52!63;CL:0000040!4.44e-52!63;CL:0000559!4.44e-52!63;CL:0002009!1.35e-51!65;CL:0000763!5.07e-51!112;CL:0000049!5.07e-51!112;CL:0002057!8.46e-46!42;CL:0000860!1.28e-41!45;CL:0000134!6.34e-14!358;CL:0002320!4.66e-13!365;CL:0000219!8.01e-11!390;CL:0000542!1.70e-08!53;CL:0000051!1.70e-08!53;CL:0002393!3.80e-08!9;CL:0002397!3.80e-08!9;CL:0000838!5.21e-08!52;CL:0000945!6.69e-08!24;CL:0000826!6.69e-08!24;CL:0000048!8.33e-08!430;CL:0000723!2.54e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-66;33!CL:0002057;1.92e-66;33!CL:0000473;1.74e-65;39!CL:0000234;1.74e-65;39!CL:0000576;2.10e-49;48!CL:0000766;3.09e-41;69!CL:0000763;2.81e-22;100!CL:0000738;1.72e-16;136!CL:0002087;1.73e-13;104!CL:0000235;2.23e-12;6!CL:0000988;2.88e-11;177!CL:0002393;2.98e-11;6!CL:0002397;2.98e-11;6!CL:0000775;2.32e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.11e-91,72;CL:0000473,1.76e-88,48;CL:0000234,1.76e-88,48;CL:0000839,3.53e-84,66;CL:0002194,2.00e-83,59;CL:0000576,2.00e-83,59;CL:0000040,2.00e-83,59;CL:0000559,2.00e-83,59;CL:0000557,9.35e-83,67;CL:0002009,2.41e-80,61;CL:0000860,6.04e-77,42;CL:0002057,6.04e-77,42;CL:0000763,5.41e-73,108;CL:0000049,5.41e-73,108;CL:0000738,8.85e-58,136;CL:0002032,9.07e-57,161;CL:0000837,9.07e-57,161;CL:0000037,8.25e-56,168;CL:0002031,2.14e-54,120;CL:0002087,1.15e-52,115;CL:0000988,3.07e-52,177;CL:0000134,8.85e-19,354;CL:0002320,3.96e-18,361;CL:0000219,7.75e-16,386;CL:0000048,4.86e-13,427;CL:0000723,1.18e-12,433;CL:0000235,2.02e-12,6;CL:0000034,3.71e-12,441;CL:0000775,1.39e-09,3;CL:0002393,2.35e-07,9;CL:0002397,2.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-55;42!CL:0000049;1.79e-20;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.70e-54!102;UBERON:0003061!8.70e-54!102;UBERON:0002193!1.25e-49!112;UBERON:0002371!1.92e-46!80;UBERON:0001474!1.33e-41!86;UBERON:0002405!1.05e-35!115;UBERON:0004765!4.35e-32!101;UBERON:0001434!4.35e-32!101;UBERON:0003081!1.13e-20!216;UBERON:0002204!1.11e-12!167;UBERON:0002384!2.28e-12!375 | |ontology_enrichment_uberon=UBERON:0002390!8.70e-54!102;UBERON:0003061!8.70e-54!102;UBERON:0002193!1.25e-49!112;UBERON:0002371!1.92e-46!80;UBERON:0001474!1.33e-41!86;UBERON:0002405!1.05e-35!115;UBERON:0004765!4.35e-32!101;UBERON:0001434!4.35e-32!101;UBERON:0003081!1.13e-20!216;UBERON:0002204!1.11e-12!167;UBERON:0002384!2.28e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-71,76;UBERON:0001474,1.58e-65,82;UBERON:0002390,1.48e-63,98;UBERON:0003061,1.48e-63,98;UBERON:0002405,4.72e-59,93;UBERON:0002193,5.22e-59,108;UBERON:0004765,1.16e-58,90;UBERON:0001434,1.29e-51,100;UBERON:0002204,4.27e-26,167;UBERON:0003081,2.50e-25,203;UBERON:0002384,3.06e-17,371;UBERON:0000926,8.23e-12,315;UBERON:0004120,8.23e-12,315;UBERON:0006603,8.23e-12,315 | |||
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|short_description=p@chr1:31214479..31214495,+ | |short_description=p@chr1:31214479..31214495,+ | ||
}} | }} |
Latest revision as of 07:06, 28 July 2015
Short description: | p@chr1:31214479..31214495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31214479..31214495, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-71 | 76 |
bone element | 1.58e-65 | 82 |
hematopoietic system | 1.48e-63 | 98 |
blood island | 1.48e-63 | 98 |
immune system | 4.72e-59 | 93 |
hemolymphoid system | 5.22e-59 | 108 |
skeletal element | 1.16e-58 | 90 |
skeletal system | 1.29e-51 | 100 |
musculoskeletal system | 4.27e-26 | 167 |
lateral plate mesoderm | 2.50e-25 | 203 |
connective tissue | 3.06e-17 | 371 |
mesoderm | 8.23e-12 | 315 |
mesoderm-derived structure | 8.23e-12 | 315 |
presumptive mesoderm | 8.23e-12 | 315 |