FFCP PHASE1:Hg19::chr5:34008179..34008215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23600 | |EntrezGene=23600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=451 | |HGNC=451 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHK6,D6RB81,Q6VRU4 | |UniProt=Q9UHK6,D6RB81,Q6VRU4 | ||
|association_with_transcript=0bp_to_ENST00000335606,ENST00000426255,ENST00000502637,uc003jig.2,uc003jih.2,uc003jii.2,uc003jij.2,uc003jik.1,uc003jil.1_5end | |association_with_transcript=0bp_to_ENST00000335606,ENST00000426255,ENST00000502637,uc003jig.2,uc003jih.2,uc003jii.2,uc003jij.2,uc003jik.1,uc003jil.1_5end | ||
|cluster_id=chr5:34008179..34008215,- | |||
|description=CAGE_peak_2_at_AMACR_5end | |description=CAGE_peak_2_at_AMACR_5end | ||
|id=chr5:34008179..34008215,- | |id=chr5:34008179..34008215,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.16e-10!86;UBERON:0001017!3.93e-10!82;UBERON:0000955!1.24e-09!69;UBERON:0006238!1.24e-09!69;UBERON:0002616!1.24e-09!59;UBERON:0001049!7.92e-09!57;UBERON:0005068!7.92e-09!57;UBERON:0006241!7.92e-09!57;UBERON:0007135!7.92e-09!57;UBERON:0000073!8.56e-09!94;UBERON:0001016!8.56e-09!94;UBERON:0001869!8.65e-09!32;UBERON:0001893!1.65e-08!34;UBERON:0003080!4.87e-08!42;UBERON:0002791!5.60e-08!33;UBERON:0002780!6.14e-08!41;UBERON:0001890!6.14e-08!41;UBERON:0006240!6.14e-08!41;UBERON:0000475!7.14e-08!365;UBERON:0002020!8.28e-08!34;UBERON:0003528!8.28e-08!34;UBERON:0000033!1.27e-07!123;UBERON:0002619!1.47e-07!22;UBERON:0000481!1.51e-07!347;UBERON:0002346!2.24e-07!90;UBERON:0001950!3.54e-07!20;UBERON:0007023!3.94e-07!115;UBERON:0003075!3.96e-07!86;UBERON:0007284!3.96e-07!86;UBERON:0000956!4.89e-07!25;UBERON:0000203!4.89e-07!25;UBERON:0000153!5.59e-07!129;UBERON:0007811!5.59e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.23e-08;32!UBERON:0001893;6.17e-08;34!UBERON:0002791;1.45e-07;32!UBERON:0002619;1.75e-07;22!UBERON:0001950;2.49e-07;20!UBERON:0003528;2.60e-07;34!UBERON:0002020;2.60e-07;34!UBERON:0000956;3.64e-07;25!UBERON:0000203;3.64e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.90e-10,81;UBERON:0000955,1.45e-09,68;UBERON:0006238,1.45e-09,68;UBERON:0011216,3.84e-09,223;UBERON:0001869,7.65e-09,32;UBERON:0001049,9.15e-09,56;UBERON:0005068,9.15e-09,56;UBERON:0006241,9.15e-09,56;UBERON:0007135,9.15e-09,56;UBERON:0000073,1.19e-08,53;UBERON:0002616,1.19e-08,53;UBERON:0001893,1.47e-08,34;UBERON:0001016,1.95e-08,89;UBERON:0002780,5.63e-08,41;UBERON:0001890,5.63e-08,41;UBERON:0003080,5.63e-08,41;UBERON:0006240,5.63e-08,41;UBERON:0002791,6.43e-08,32;UBERON:0003528,7.45e-08,34;UBERON:0002020,7.45e-08,34;UBERON:0002619,1.33e-07,22;UBERON:0001950,3.22e-07,20;UBERON:0007023,3.33e-07,114;UBERON:0000956,4.45e-07,25;UBERON:0000203,4.45e-07,25 | |||
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| ||
|short_description=p2@AMACR | |short_description=p2@AMACR | ||
}} | }} |
Latest revision as of 17:14, 17 September 2015
Short description: | p2@AMACR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AMACR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335606, ENST00000426255, ENST00000502637, uc003jig.2, uc003jih.2, uc003jii.2, uc003jij.2, uc003jik.1, uc003jil.1_5end |
EntrezGene: | AMACR |
HGNC: | 451 |
UniProt: | Q9UHK6D6RB81Q6VRU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.90e-10 | 81 |
brain | 1.45e-09 | 68 |
future brain | 1.45e-09 | 68 |
organ system subdivision | 3.84e-09 | 223 |
cerebral hemisphere | 7.65e-09 | 32 |
neural tube | 9.15e-09 | 56 |
neural rod | 9.15e-09 | 56 |
future spinal cord | 9.15e-09 | 56 |
neural keel | 9.15e-09 | 56 |
regional part of nervous system | 1.19e-08 | 53 |
regional part of brain | 1.19e-08 | 53 |
telencephalon | 1.47e-08 | 34 |
nervous system | 1.95e-08 | 89 |
regional part of forebrain | 5.63e-08 | 41 |
forebrain | 5.63e-08 | 41 |
anterior neural tube | 5.63e-08 | 41 |
future forebrain | 5.63e-08 | 41 |
regional part of telencephalon | 6.43e-08 | 32 |
brain grey matter | 7.45e-08 | 34 |
gray matter | 7.45e-08 | 34 |
regional part of cerebral cortex | 1.33e-07 | 22 |
neocortex | 3.22e-07 | 20 |
adult organism | 3.33e-07 | 114 |
cerebral cortex | 4.45e-07 | 25 |
pallium | 4.45e-07 | 25 |