FFCP PHASE1:Hg19::chr6:138204018..138204028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:138204018..138204028,+ | |||
|coexpression_cluster_id=C426 | |||
|description=CAGE_peak_at_chr6:138204018..138204028,+ | |description=CAGE_peak_at_chr6:138204018..138204028,+ | ||
|id=chr6:138204018..138204028,+ | |id=chr6:138204018..138204028,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.50e-30!140;CL:0002031!2.99e-24!124;CL:0002087!1.79e-23!119;CL:0002057!1.24e-21!42;CL:0000037!3.05e-21!172;CL:0000566!3.05e-21!172;CL:0000988!6.69e-21!182;CL:0002032!9.61e-21!165;CL:0000837!9.61e-21!165;CL:0000860!1.26e-19!45;CL:0000766!2.78e-19!76;CL:0000557!3.84e-17!71;CL:0002009!1.32e-15!65;CL:0000839!6.00e-15!70;CL:0002194!8.71e-14!63;CL:0000576!8.71e-14!63;CL:0000040!8.71e-14!63;CL:0000559!8.71e-14!63;CL:0000763!3.21e-12!112;CL:0000049!3.21e-12!112;CL:0000624!9.20e-11!6;CL:0000134!5.64e-09!358;CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0002320!1.94e-08!365;CL:0000838!5.28e-08!52;CL:0000723!5.54e-07!436;CL:0000048!5.54e-07!430;CL:0000219!5.80e-07!390;CL:0000034!6.68e-07!444;CL:0000791!7.78e-07!18;CL:0000789!7.78e-07!18;CL:0002420!7.78e-07!18;CL:0002419!7.78e-07!18;CL:0000790!7.78e-07!18 | |ontology_enrichment_celltype=CL:0000738!2.50e-30!140;CL:0002031!2.99e-24!124;CL:0002087!1.79e-23!119;CL:0002057!1.24e-21!42;CL:0000037!3.05e-21!172;CL:0000566!3.05e-21!172;CL:0000988!6.69e-21!182;CL:0002032!9.61e-21!165;CL:0000837!9.61e-21!165;CL:0000860!1.26e-19!45;CL:0000766!2.78e-19!76;CL:0000557!3.84e-17!71;CL:0002009!1.32e-15!65;CL:0000839!6.00e-15!70;CL:0002194!8.71e-14!63;CL:0000576!8.71e-14!63;CL:0000040!8.71e-14!63;CL:0000559!8.71e-14!63;CL:0000763!3.21e-12!112;CL:0000049!3.21e-12!112;CL:0000624!9.20e-11!6;CL:0000134!5.64e-09!358;CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0002320!1.94e-08!365;CL:0000838!5.28e-08!52;CL:0000723!5.54e-07!436;CL:0000048!5.54e-07!430;CL:0000219!5.80e-07!390;CL:0000034!6.68e-07!444;CL:0000791!7.78e-07!18;CL:0000789!7.78e-07!18;CL:0002420!7.78e-07!18;CL:0002419!7.78e-07!18;CL:0000790!7.78e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.77e-22;3!CL:0000860;1.80e-18;33!CL:0002057;1.80e-18;33!CL:0000576;1.82e-14;48!CL:0000473;1.89e-14;39!CL:0000234;1.89e-14;39!CL:0000766;2.04e-11;69!CL:0002393;2.85e-11;6!CL:0002397;2.85e-11;6!CL:0000775;6.30e-11;3!CL:0002087;8.31e-11;104!CL:0000791;4.65e-10;18!CL:0000789;4.65e-10;18!CL:0002419;4.65e-10;18!CL:0000738;1.42e-08;136!CL:0000763;1.70e-08;100!CL:0000222;2.37e-08;1!CL:0000084;3.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.20e-31,136;CL:0002031,3.28e-27,120;CL:0000860,3.54e-26,42;CL:0002057,3.54e-26,42;CL:0002087,7.15e-26,115;CL:0000037,2.15e-24,168;CL:0002032,1.78e-23,161;CL:0000837,1.78e-23,161;CL:0000988,6.11e-23,177;CL:0000473,1.31e-22,48;CL:0000234,1.31e-22,48;CL:0000623,4.34e-22,3;CL:0000825,4.34e-22,3;CL:0000766,6.28e-22,72;CL:0000557,1.29e-20,67;CL:0002009,7.28e-20,61;CL:0000839,4.49e-18,66;CL:0002194,1.31e-17,59;CL:0000576,1.31e-17,59;CL:0000040,1.31e-17,59;CL:0000559,1.31e-17,59;CL:0000763,1.15e-15,108;CL:0000049,1.15e-15,108;CL:0000775,5.59e-11,3;CL:0000791,4.03e-10,18;CL:0000789,4.03e-10,18;CL:0002420,4.03e-10,18;CL:0002419,4.03e-10,18;CL:0000790,4.03e-10,18;CL:0000134,3.01e-09,354;CL:0002320,5.59e-09,361;CL:0000219,4.97e-08,386;CL:0000838,7.19e-08,52;CL:0002393,1.05e-07,9;CL:0002397,1.05e-07,9;CL:0000542,1.06e-07,53;CL:0000051,1.06e-07,53;CL:0000084,3.21e-07,25;CL:0000827,3.21e-07,25;CL:0000048,7.25e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.01e-19;42!CL:0000790;4.65e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.25e-16!102;UBERON:0003061!2.25e-16!102;UBERON:0002371!3.05e-15!80;UBERON:0002193!7.64e-15!112;UBERON:0001474!1.50e-14!86;UBERON:0002405!5.12e-12!115;UBERON:0004765!8.41e-12!101;UBERON:0001434!8.41e-12!101;UBERON:0002384!3.80e-08!375;UBERON:0003081!1.26e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.14e-18,76;UBERON:0001474,2.25e-16,82;UBERON:0002390,3.04e-15,98;UBERON:0003061,3.04e-15,98;UBERON:0004765,1.10e-14,90;UBERON:0002405,3.98e-14,93;UBERON:0002193,1.45e-13,108;UBERON:0001434,5.98e-13,100;UBERON:0002384,1.30e-08,371 | |||
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|short_description=p@chr6:138204018..138204028,+ | |short_description=p@chr6:138204018..138204028,+ | ||
}} | }} |
Latest revision as of 20:05, 30 July 2015
Short description: | p@chr6:138204018..138204028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138204018..138204028, + |
Coexpression cluster: | C426_CD4_CD14_Neutrophils_CD8_Natural_Mast_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.14e-18 | 76 |
bone element | 2.25e-16 | 82 |
hematopoietic system | 3.04e-15 | 98 |
blood island | 3.04e-15 | 98 |
skeletal element | 1.10e-14 | 90 |
immune system | 3.98e-14 | 93 |
hemolymphoid system | 1.45e-13 | 108 |
skeletal system | 5.98e-13 | 100 |
connective tissue | 1.30e-08 | 371 |