FFCP PHASE1:Hg19::chr6:86159821..86159839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4907 | |EntrezGene=4907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |HGNC=8021 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQI8 | |UniProt=B3KQI8 | ||
|association_with_transcript=0bp_to_ENST00000369651_5end | |association_with_transcript=0bp_to_ENST00000369651_5end | ||
|cluster_id=chr6:86159821..86159839,+ | |||
|coexpression_cluster_id=C2870 | |||
|description=CAGE_peak_2_at_NT5E_5end | |description=CAGE_peak_2_at_NT5E_5end | ||
|id=chr6:86159821..86159839,+ | |id=chr6:86159821..86159839,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.90e-28!180;CL:0000220!3.27e-26!246;CL:0002321!2.38e-25!248;CL:0000222!5.28e-20!119;CL:0000057!2.43e-16!75;CL:0000680!5.07e-16!57;CL:0000056!5.07e-16!57;CL:0000355!5.07e-16!57;CL:0000548!1.90e-15!679;CL:0000004!1.90e-15!679;CL:0000255!1.90e-15!679;CL:0000359!2.45e-15!32;CL:0000192!6.27e-15!42;CL:0000514!6.27e-15!42;CL:0002371!1.37e-14!591;CL:0000012!1.64e-14!682;CL:0000187!2.04e-14!54;CL:0000183!1.96e-13!59;CL:0000144!9.74e-13!625;CL:0000066!2.44e-11!254;CL:0000393!6.98e-11!60;CL:0000211!6.98e-11!60;CL:0000003!2.32e-08!722;CL:0002620!4.10e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.90e-28!180;CL:0000220!3.27e-26!246;CL:0002321!2.38e-25!248;CL:0000222!5.28e-20!119;CL:0000057!2.43e-16!75;CL:0000680!5.07e-16!57;CL:0000056!5.07e-16!57;CL:0000355!5.07e-16!57;CL:0000548!1.90e-15!679;CL:0000004!1.90e-15!679;CL:0000255!1.90e-15!679;CL:0000359!2.45e-15!32;CL:0000192!6.27e-15!42;CL:0000514!6.27e-15!42;CL:0002371!1.37e-14!591;CL:0000012!1.64e-14!682;CL:0000187!2.04e-14!54;CL:0000183!1.96e-13!59;CL:0000144!9.74e-13!625;CL:0000066!2.44e-11!254;CL:0000393!6.98e-11!60;CL:0000211!6.98e-11!60;CL:0000003!2.32e-08!722;CL:0002620!4.10e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.55e-15;32!CL:0000192;1.92e-11;43!CL:0002620;2.08e-08;23!CL:0000187;3.16e-08;55!CL:0000499;3.54e-07;28!CL:0000057;3.63e-07;73!CL:0000134;8.72e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.32e-27,250;CL:0000222,3.51e-21,121;CL:0000057,2.36e-17,76;CL:0000680,1.09e-16,58;CL:0000056,1.09e-16,58;CL:0000355,1.09e-16,58;CL:0000359,5.58e-16,32;CL:0000192,1.67e-15,43;CL:0000514,1.67e-15,43;CL:0000187,5.16e-15,55;CL:0000393,1.27e-11,61;CL:0000211,1.27e-11,61;CL:0000066,1.67e-10,253;CL:0002620,2.03e-08,23;CL:0000499,3.49e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;1.92e-11;43!CL:0000355;8.51e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.39e-22!83;UBERON:0002329!1.39e-22!83;UBERON:0003077!1.39e-22!83;UBERON:0003059!1.39e-22!83;UBERON:0007282!1.39e-22!83;UBERON:0009618!1.39e-22!83;UBERON:0007285!1.39e-22!83;UBERON:0000486!3.84e-21!82;UBERON:0005256!5.12e-21!143;UBERON:0002049!6.54e-19!79;UBERON:0007798!6.54e-19!79;UBERON:0004290!1.29e-17!70;UBERON:0000475!6.02e-17!365;UBERON:0002100!1.35e-16!216;UBERON:0000055!1.82e-16!69;UBERON:0001637!2.69e-16!42;UBERON:0003509!2.69e-16!42;UBERON:0004572!2.69e-16!42;UBERON:0001981!7.21e-16!60;UBERON:0007500!7.21e-16!60;UBERON:0004537!7.21e-16!60;UBERON:0006965!7.21e-16!60;UBERON:0000119!2.53e-15!312;UBERON:0000490!5.26e-15!138;UBERON:0003914!9.77e-15!118;UBERON:0000483!1.62e-14!309;UBERON:0004872!2.96e-14!84;UBERON:0003102!3.16e-14!95;UBERON:0001134!6.68e-14!61;UBERON:0002036!6.68e-14!61;UBERON:0003082!6.68e-14!61;UBERON:0004573!8.72e-14!33;UBERON:0004571!8.72e-14!33;UBERON:0002385!1.21e-13!63;UBERON:0001015!1.21e-13!63;UBERON:0000383!1.21e-13!63;UBERON:0000467!1.15e-12!625;UBERON:0004535!1.68e-12!110;UBERON:0000481!1.94e-12!347;UBERON:0000480!2.17e-12!626;UBERON:0003104!4.80e-12!238;UBERON:0009142!4.80e-12!238;UBERON:0000477!5.41e-12!286;UBERON:0000468!8.20e-12!659;UBERON:0001009!2.00e-11!113;UBERON:0004111!3.93e-09!241;UBERON:0002199!7.21e-09!45;UBERON:0002416!7.21e-09!45;UBERON:0002097!2.82e-08!40;UBERON:0000947!1.16e-07!21;UBERON:0010191!1.16e-07!21;UBERON:0000923!2.32e-07!604;UBERON:0005291!2.32e-07!604;UBERON:0006598!2.32e-07!604;UBERON:0002532!2.32e-07!604;UBERON:0002050!2.90e-07!605;UBERON:0005423!2.90e-07!605;UBERON:0000926!5.02e-07!448;UBERON:0004120!5.02e-07!448;UBERON:0006603!5.02e-07!448;UBERON:0003100!8.86e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.63e-13;33!UBERON:0004571;3.63e-13;33!UBERON:0001637;4.55e-12;42!UBERON:0003509;4.55e-12;42!UBERON:0004572;4.55e-12;42!UBERON:0007500;7.97e-10;56!UBERON:0001981;7.97e-10;56!UBERON:0004537;7.97e-10;56!UBERON:0000055;3.91e-09;65!UBERON:0002049;4.65e-09;75!UBERON:0007798;4.65e-09;75!UBERON:0000947;5.72e-08;21!UBERON:0010191;5.72e-08;21!UBERON:0003914;5.91e-08;74!UBERON:0000075;2.32e-07;16!UBERON:0002097;6.28e-07;41!UBERON:0004923;7.58e-07;55 | |||
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| ||
|short_description=p2@NT5E | |short_description=p2@NT5E | ||
}} | }} |
Latest revision as of 01:07, 20 September 2015
Short description: | p2@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NT5E_5end |
Coexpression cluster: | C2870_Smooth_leiomyoma_giant_Synoviocyte_Urothelial_Myoblast_mesenchymal |
Association with transcript: | 0bp_to_ENST00000369651_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | B3KQI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.32e-27 | 250 |
mesodermal cell | 3.51e-21 | 121 |
fibroblast | 2.36e-17 | 76 |
muscle precursor cell | 1.09e-16 | 58 |
myoblast | 1.09e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-16 | 58 |
vascular associated smooth muscle cell | 5.58e-16 | 32 |
smooth muscle cell | 1.67e-15 | 43 |
smooth muscle myoblast | 1.67e-15 | 43 |
muscle cell | 5.16e-15 | 55 |
electrically responsive cell | 1.27e-11 | 61 |
electrically active cell | 1.27e-11 | 61 |
epithelial cell | 1.67e-10 | 253 |
skin fibroblast | 2.03e-08 | 23 |
stromal cell | 3.49e-07 | 28 |