FFCP PHASE1:Hg19::chr7:45016548..45016567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64005 | |EntrezGene=64005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13880 | |HGNC=13880 | ||
|TSSclassifier=strong | |||
|UniProt=B0I1T2 | |UniProt=B0I1T2 | ||
|association_with_transcript=102bp_to_uc003tmi.1_5end | |association_with_transcript=102bp_to_uc003tmi.1_5end | ||
|cluster_id=chr7:45016548..45016567,- | |||
|coexpression_cluster_id=C1875 | |||
|description=CAGE_peak_5_at_MYO1G_5end | |description=CAGE_peak_5_at_MYO1G_5end | ||
|id=chr7:45016548..45016567,- | |id=chr7:45016548..45016567,- | ||
|ontology_enrichment_celltype=CL:0000037!9.53e-84!172;CL:0000566!9.53e-84!172;CL:0002032!4.98e-82!165;CL:0000837!4.98e-82!165;CL:0000988!5.14e-80!182;CL:0000738!1.38e-73!140;CL:0002087!4.05e-70!119;CL:0002031!5.31e-64!124;CL:0000860!1.03e-50!45;CL:0000763!7.47e-50!112;CL:0000049!7.47e-50!112;CL:0002057!1.52e-48!42;CL:0000766!4.27e-39!76;CL:0002194!7.89e-38!63;CL:0000576!7.89e-38!63;CL:0000040!7.89e-38!63;CL:0000559!7.89e-38!63;CL:0002009!9.46e-38!65;CL:0000557!1.86e-34!71;CL:0000839!1.08e-33!70;CL:0000838!8.61e-28!52;CL:0000542!5.32e-27!53;CL:0000051!5.32e-27!53;CL:0000134!1.29e-22!358;CL:0002320!1.73e-21!365;CL:0000219!1.47e-17!390;CL:0000084!1.48e-15!25;CL:0000827!1.48e-15!25;CL:0000048!2.06e-13!430;CL:0000723!9.10e-13!436;CL:0000034!6.10e-12!444;CL:0000945!4.18e-11!24;CL:0000826!4.18e-11!24;CL:0000791!4.73e-11!18;CL:0000789!4.73e-11!18;CL:0002420!4.73e-11!18;CL:0002419!4.73e-11!18;CL:0000790!4.73e-11!18;CL:0002393!2.61e-08!9;CL:0002397!2.61e-08!9;CL:0000236!5.67e-07!14 | |ontology_enrichment_celltype=CL:0000037!9.53e-84!172;CL:0000566!9.53e-84!172;CL:0002032!4.98e-82!165;CL:0000837!4.98e-82!165;CL:0000988!5.14e-80!182;CL:0000738!1.38e-73!140;CL:0002087!4.05e-70!119;CL:0002031!5.31e-64!124;CL:0000860!1.03e-50!45;CL:0000763!7.47e-50!112;CL:0000049!7.47e-50!112;CL:0002057!1.52e-48!42;CL:0000766!4.27e-39!76;CL:0002194!7.89e-38!63;CL:0000576!7.89e-38!63;CL:0000040!7.89e-38!63;CL:0000559!7.89e-38!63;CL:0002009!9.46e-38!65;CL:0000557!1.86e-34!71;CL:0000839!1.08e-33!70;CL:0000838!8.61e-28!52;CL:0000542!5.32e-27!53;CL:0000051!5.32e-27!53;CL:0000134!1.29e-22!358;CL:0002320!1.73e-21!365;CL:0000219!1.47e-17!390;CL:0000084!1.48e-15!25;CL:0000827!1.48e-15!25;CL:0000048!2.06e-13!430;CL:0000723!9.10e-13!436;CL:0000034!6.10e-12!444;CL:0000945!4.18e-11!24;CL:0000826!4.18e-11!24;CL:0000791!4.73e-11!18;CL:0000789!4.73e-11!18;CL:0002420!4.73e-11!18;CL:0002419!4.73e-11!18;CL:0000790!4.73e-11!18;CL:0002393!2.61e-08!9;CL:0002397!2.61e-08!9;CL:0000236!5.67e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-71;33!CL:0002057;1.30e-71;33!CL:0000473;3.25e-49;39!CL:0000234;3.25e-49;39!CL:0000576;1.06e-43;48!CL:0000766;3.01e-26;69!CL:0002087;4.06e-19;104!CL:0000763;1.34e-18;100!CL:0000738;2.17e-14;136!CL:0000988;7.76e-11;177!CL:0002393;2.77e-07;6!CL:0002397;2.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.44e-81,42;CL:0002057,5.44e-81,42;CL:0000473,1.51e-69,48;CL:0000234,1.51e-69,48;CL:0002032,1.35e-54,161;CL:0000837,1.35e-54,161;CL:0000037,1.02e-53,168;CL:0002194,1.54e-53,59;CL:0000576,1.54e-53,59;CL:0000040,1.54e-53,59;CL:0000559,1.54e-53,59;CL:0002009,1.79e-51,61;CL:0000738,2.39e-51,136;CL:0002087,8.03e-51,115;CL:0000763,1.10e-50,108;CL:0000049,1.10e-50,108;CL:0000988,3.10e-50,177;CL:0000766,2.10e-47,72;CL:0000839,7.44e-47,66;CL:0000557,5.17e-46,67;CL:0002031,5.32e-46,120;CL:0000134,1.25e-17,354;CL:0002320,5.39e-17,361;CL:0000219,9.08e-15,386;CL:0000048,4.71e-12,427;CL:0000723,1.11e-11,433;CL:0000034,3.38e-11,441;CL:0002393,2.44e-07,9;CL:0002397,2.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-59;42!CL:0000049;4.77e-17;108 | |||
|ontology_enrichment_disease=DOID:2531!2.48e-13!51;DOID:0060083!2.48e-13!51;DOID:1240!2.30e-11!39;DOID:8692!3.81e-09!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-41!102;UBERON:0003061!2.28e-41!102;UBERON:0002193!5.95e-38!112;UBERON:0002371!8.05e-30!80;UBERON:0001474!1.70e-26!86;UBERON:0002405!3.61e-23!115;UBERON:0002384!1.58e-20!375;UBERON:0004765!5.44e-20!101;UBERON:0001434!5.44e-20!101;UBERON:0003081!5.78e-10!216;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.57e-40,98;UBERON:0003061,3.57e-40,98;UBERON:0002371,2.01e-39,76;UBERON:0001474,7.89e-36,82;UBERON:0002193,2.01e-35,108;UBERON:0002405,2.52e-32,93;UBERON:0004765,8.84e-32,90;UBERON:0001434,1.25e-27,100;UBERON:0002384,3.93e-16,371;UBERON:0003081,9.96e-14,203;UBERON:0002204,9.68e-13,167 | |||
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|short_description=p5@MYO1G | |short_description=p5@MYO1G | ||
}} | }} |
Latest revision as of 18:11, 18 September 2015
Short description: | p5@MYO1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYO1G_5end |
Coexpression cluster: | C1875_migratory_CD14_CD14CD16_CD4_Basophils_NK_acute |
Association with transcript: | 102bp_to_uc003tmi.1_5end |
EntrezGene: | MYO1G |
HGNC: | 13880 |
UniProt: | B0I1T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.44e-81 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.44e-81 | 42 |
defensive cell | 1.51e-69 | 48 |
phagocyte | 1.51e-69 | 48 |
hematopoietic oligopotent progenitor cell | 1.35e-54 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-54 | 161 |
hematopoietic stem cell | 1.02e-53 | 168 |
monopoietic cell | 1.54e-53 | 59 |
monocyte | 1.54e-53 | 59 |
monoblast | 1.54e-53 | 59 |
promonocyte | 1.54e-53 | 59 |
macrophage dendritic cell progenitor | 1.79e-51 | 61 |
leukocyte | 2.39e-51 | 136 |
nongranular leukocyte | 8.03e-51 | 115 |
myeloid cell | 1.10e-50 | 108 |
common myeloid progenitor | 1.10e-50 | 108 |
hematopoietic cell | 3.10e-50 | 177 |
myeloid leukocyte | 2.10e-47 | 72 |
myeloid lineage restricted progenitor cell | 7.44e-47 | 66 |
granulocyte monocyte progenitor cell | 5.17e-46 | 67 |
hematopoietic lineage restricted progenitor cell | 5.32e-46 | 120 |
mesenchymal cell | 1.25e-17 | 354 |
connective tissue cell | 5.39e-17 | 361 |
motile cell | 9.08e-15 | 386 |
multi fate stem cell | 4.71e-12 | 427 |
somatic stem cell | 1.11e-11 | 433 |
stem cell | 3.38e-11 | 441 |
intermediate monocyte | 2.44e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.57e-40 | 98 |
blood island | 3.57e-40 | 98 |
bone marrow | 2.01e-39 | 76 |
bone element | 7.89e-36 | 82 |
hemolymphoid system | 2.01e-35 | 108 |
immune system | 2.52e-32 | 93 |
skeletal element | 8.84e-32 | 90 |
skeletal system | 1.25e-27 | 100 |
connective tissue | 3.93e-16 | 371 |
lateral plate mesoderm | 9.96e-14 | 203 |
musculoskeletal system | 9.68e-13 | 167 |