FFCP PHASE1:Hg19::chr7:93516018..93516037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93516018..93516037,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93516018..93516037,- | |description=CAGE_peak_at_chr7:93516018..93516037,- | ||
|id=chr7:93516018..93516037,- | |id=chr7:93516018..93516037,- | ||
|ontology_enrichment_celltype=CL:0000187!7.06e-23!54;CL:0000192!8.22e-23!42;CL:0000514!8.22e-23!42;CL:0000680!1.39e-22!57;CL:0000056!1.39e-22!57;CL:0000355!1.39e-22!57;CL:0000183!1.75e-21!59;CL:0000393!1.39e-19!60;CL:0000211!1.39e-19!60;CL:0000359!2.67e-19!32;CL:0000055!1.25e-13!180;CL:0000222!1.21e-10!119;CL:0002494!3.14e-09!16;CL:0002594!7.55e-07!4 | |ontology_enrichment_celltype=CL:0000187!7.06e-23!54;CL:0000192!8.22e-23!42;CL:0000514!8.22e-23!42;CL:0000680!1.39e-22!57;CL:0000056!1.39e-22!57;CL:0000355!1.39e-22!57;CL:0000183!1.75e-21!59;CL:0000393!1.39e-19!60;CL:0000211!1.39e-19!60;CL:0000359!2.67e-19!32;CL:0000055!1.25e-13!180;CL:0000222!1.21e-10!119;CL:0002494!3.14e-09!16;CL:0002594!7.55e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.09e-26;32!CL:0002595;1.17e-21;5!CL:0000192;2.85e-15;43!CL:0002589;1.46e-14;2!CL:0002593;2.13e-14;2!CL:0002592;5.24e-10;3!CL:0000187;2.16e-08;55!CL:0002568;7.09e-08;1!CL:0002591;7.09e-08;1!CL:0000393;8.43e-07;61!CL:0000211;8.43e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.08e-27,32;CL:0002595,1.05e-21,5;CL:0000192,4.80e-20,43;CL:0000514,4.80e-20,43;CL:0000187,3.46e-15,55;CL:0002589,1.37e-14,2;CL:0000680,2.75e-14,58;CL:0000056,2.75e-14,58;CL:0000355,2.75e-14,58;CL:0002593,3.78e-14,2;CL:0000393,1.78e-13,61;CL:0000211,1.78e-13,61;CL:0002592,3.49e-10,3;CL:0002591,8.69e-08,1;CL:0002568,1.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-15;43!UBERON:0003124;2.19e-08;1!CL:0000355;1.19e-07;58!UBERON:0005795;9.44e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!9.59e-14!14;DOID:120!3.08e-08!27;DOID:0060072!4.45e-08!4;DOID:193!1.95e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.87e-23;14!DOID:0060072;8.33e-16;4!DOID:120;5.12e-15;27!DOID:193;6.66e-14;29!DOID:0060084;3.99e-10;3!DOID:127;3.99e-10;3!DOID:0060085;7.09e-08;1!DOID:3165;7.09e-08;1!DOID:0060121;7.09e-08;1!DOID:2438;7.09e-08;1!DOID:4418;7.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.25e-23,14;DOID:0060072,6.17e-16,4;DOID:120,5.33e-15,27;DOID:193,6.91e-14,29;DOID:0060084,3.65e-10,3;DOID:127,3.65e-10,3;DOID:0060085,5.40e-08,1;DOID:3165,5.40e-08,1;DOID:0060121,5.40e-08,1;DOID:2438,5.40e-08,1;DOID:4418,5.40e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.01e-20!61;UBERON:0002036!2.01e-20!61;UBERON:0003082!2.01e-20!61;UBERON:0004872!6.08e-20!84;UBERON:0001637!1.75e-19!42;UBERON:0003509!1.75e-19!42;UBERON:0004572!1.75e-19!42;UBERON:0002385!1.89e-19!63;UBERON:0001015!1.89e-19!63;UBERON:0000383!1.89e-19!63;UBERON:0004290!8.33e-18!70;UBERON:0001981!1.82e-17!60;UBERON:0007500!1.82e-17!60;UBERON:0004537!1.82e-17!60;UBERON:0006965!1.82e-17!60;UBERON:0000914!1.40e-16!83;UBERON:0002329!1.40e-16!83;UBERON:0003077!1.40e-16!83;UBERON:0003059!1.40e-16!83;UBERON:0007282!1.40e-16!83;UBERON:0009618!1.40e-16!83;UBERON:0007285!1.40e-16!83;UBERON:0000486!5.88e-16!82;UBERON:0003914!8.44e-16!118;UBERON:0000055!3.62e-15!69;UBERON:0004573!1.05e-14!33;UBERON:0004571!1.05e-14!33;UBERON:0000490!1.38e-14!138;UBERON:0004535!3.09e-13!110;UBERON:0002049!4.28e-13!79;UBERON:0007798!4.28e-13!79;UBERON:0001009!1.38e-12!113;UBERON:0005256!1.18e-11!143;UBERON:0002100!1.44e-09!216;UBERON:0003498!1.70e-09!5;UBERON:0005985!1.70e-09!5;UBERON:0000119!2.78e-09!312;UBERON:0000948!2.95e-09!24;UBERON:0005498!2.95e-09!24;UBERON:0004140!2.95e-09!24;UBERON:0009881!2.95e-09!24;UBERON:0004141!2.95e-09!24;UBERON:0003084!2.95e-09!24;UBERON:0007005!2.95e-09!24;UBERON:0004139!2.95e-09!24;UBERON:0004291!2.95e-09!24;UBERON:0000483!4.20e-09!309;UBERON:0000992!6.20e-08!13;UBERON:0007100!7.46e-08!27;UBERON:0003104!1.40e-07!238;UBERON:0009142!1.40e-07!238;UBERON:0004111!1.52e-07!241;UBERON:0000926!1.91e-07!448;UBERON:0004120!1.91e-07!448;UBERON:0006603!1.91e-07!448;UBERON:0000481!4.22e-07!347;UBERON:0000025!7.07e-07!194;UBERON:0001310!7.55e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.17e-21;5!UBERON:0001533;1.17e-21;5!UBERON:0004573;5.11e-19;33!UBERON:0004571;5.11e-19;33!UBERON:0000992;2.13e-18;13!UBERON:0001637;2.52e-17;42!UBERON:0003509;2.52e-17;42!UBERON:0004572;2.52e-17;42!UBERON:0002119;5.28e-16;4!UBERON:0003513;1.55e-15;7!UBERON:0001529;1.46e-14;2!UBERON:0007204;1.46e-14;2!UBERON:0002456;2.13e-14;2!UBERON:0002118;7.52e-13;5!UBERON:0003134;7.38e-12;33!UBERON:0000991;3.41e-11;21!UBERON:0000474;7.61e-11;37!UBERON:0003498;5.24e-10;3!UBERON:0005985;5.24e-10;3!UBERON:0001621;5.24e-10;3!UBERON:0003100;9.73e-10;41!UBERON:0002049;1.61e-07;75!UBERON:0007798;1.61e-07;75!UBERON:0007500;2.62e-07;56!UBERON:0001981;2.62e-07;56!UBERON:0004537;2.62e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.66e-22,33;UBERON:0004571,1.66e-22,33;UBERON:0003834,1.05e-21,5;UBERON:0001533,1.05e-21,5;UBERON:0001637,1.42e-20,42;UBERON:0003509,1.42e-20,42;UBERON:0004572,1.42e-20,42;UBERON:0000992,2.37e-18,13;UBERON:0002119,4.11e-16,4;UBERON:0003513,1.44e-15,7;UBERON:0001529,1.37e-14,2;UBERON:0007204,1.37e-14,2;UBERON:0002456,3.78e-14,2;UBERON:0007500,5.23e-14,59;UBERON:0001981,5.23e-14,59;UBERON:0004537,5.23e-14,59;UBERON:0006965,5.23e-14,59;UBERON:0003134,1.56e-13,37;UBERON:0000474,1.56e-13,37;UBERON:0001134,3.19e-13,62;UBERON:0002036,3.19e-13,62;UBERON:0003082,3.19e-13,62;UBERON:0004872,4.37e-13,83;UBERON:0003498,9.39e-13,5;UBERON:0005985,9.39e-13,5;UBERON:0002385,9.68e-13,64;UBERON:0001015,9.68e-13,64;UBERON:0000383,9.68e-13,64;UBERON:0002118,1.06e-12,5;UBERON:0003100,4.52e-12,41;UBERON:0000055,7.33e-12,68;UBERON:0002329,2.88e-11,71;UBERON:0003059,2.88e-11,71;UBERON:0007282,2.88e-11,71;UBERON:0004290,2.88e-11,71;UBERON:0009618,2.88e-11,71;UBERON:0000991,3.65e-11,21;UBERON:0009196,3.65e-11,21;UBERON:0009117,3.65e-11,21;UBERON:0005564,3.65e-11,21;UBERON:0003077,4.43e-11,72;UBERON:0007285,4.43e-11,72;UBERON:0007524,6.73e-11,73;UBERON:0004176,1.24e-10,22;UBERON:0001621,3.49e-10,3;UBERON:0003133,4.22e-10,48;UBERON:0002049,4.65e-10,78;UBERON:0007503,4.65e-10,78;UBERON:0007798,4.65e-10,78;UBERON:0005156,8.58e-10,59;UBERON:0000990,8.58e-10,59;UBERON:0000486,2.54e-09,83;UBERON:0000926,1.32e-08,315;UBERON:0004120,1.32e-08,315;UBERON:0006603,1.32e-08,315;UBERON:0004535,7.03e-08,109;UBERON:0001009,1.32e-07,112;UBERON:0003914,3.53e-07,117;UBERON:0005256,9.75e-07,122 | |||
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| ||
|short_description=p@chr7:93516018..93516037,- | |short_description=p@chr7:93516018..93516037,- | ||
}} | }} |
Latest revision as of 12:35, 31 July 2015
Short description: | p@chr7:93516018..93516037, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516018..93516037, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.08e-27 | 32 |
smooth muscle cell of the subclavian artery | 1.05e-21 | 5 |
smooth muscle cell | 4.80e-20 | 43 |
smooth muscle myoblast | 4.80e-20 | 43 |
muscle cell | 3.46e-15 | 55 |
smooth muscle cell of the brachiocephalic vasculature | 1.37e-14 | 2 |
muscle precursor cell | 2.75e-14 | 58 |
myoblast | 2.75e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.75e-14 | 58 |
smooth muscle cell of the internal thoracic artery | 3.78e-14 | 2 |
electrically responsive cell | 1.78e-13 | 61 |
electrically active cell | 1.78e-13 | 61 |
smooth muscle cell of the coronary artery | 3.49e-10 | 3 |
smooth muscle cell of the pulmonary artery | 8.69e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 1.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.25e-23 | 14 |
benign neoplasm | 6.17e-16 | 4 |
female reproductive organ cancer | 5.33e-15 | 27 |
reproductive organ cancer | 6.91e-14 | 29 |
cell type benign neoplasm | 3.65e-10 | 3 |
leiomyoma | 3.65e-10 | 3 |
organ system benign neoplasm | 5.40e-08 | 1 |
skin benign neoplasm | 5.40e-08 | 1 |
integumentary system benign neoplasm | 5.40e-08 | 1 |
dermis tumor | 5.40e-08 | 1 |
cutaneous fibrous histiocytoma | 5.40e-08 | 1 |