FFCP PHASE1:Hg19::chr2:216249575..216249598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216249575..216249598,+ | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216249575..216249598,+ | |description=CAGE_peak_at_chr2:216249575..216249598,+ | ||
|id=chr2:216249575..216249598,+ | |id=chr2:216249575..216249598,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.72e-32!180;CL:0000057!8.01e-25!75;CL:0002371!7.97e-18!591;CL:0000144!5.72e-17!625;CL:0000048!9.47e-13!430;CL:0000723!1.27e-12!436;CL:0000548!1.38e-12!679;CL:0000004!1.38e-12!679;CL:0000255!1.38e-12!679;CL:0000034!1.72e-12!444;CL:0000012!3.79e-12!682;CL:0000680!4.41e-12!57;CL:0000056!4.41e-12!57;CL:0000355!4.41e-12!57;CL:0000183!1.10e-11!59;CL:0002620!1.85e-11!23;CL:0000187!1.04e-10!54;CL:0002494!3.26e-09!16;CL:0000393!6.49e-09!60;CL:0000211!6.49e-09!60;CL:0002334!1.93e-08!12;CL:0000003!1.13e-07!722 | |ontology_enrichment_celltype=CL:0000055!5.72e-32!180;CL:0000057!8.01e-25!75;CL:0002371!7.97e-18!591;CL:0000144!5.72e-17!625;CL:0000048!9.47e-13!430;CL:0000723!1.27e-12!436;CL:0000548!1.38e-12!679;CL:0000004!1.38e-12!679;CL:0000255!1.38e-12!679;CL:0000034!1.72e-12!444;CL:0000012!3.79e-12!682;CL:0000680!4.41e-12!57;CL:0000056!4.41e-12!57;CL:0000355!4.41e-12!57;CL:0000183!1.10e-11!59;CL:0002620!1.85e-11!23;CL:0000187!1.04e-10!54;CL:0002494!3.26e-09!16;CL:0000393!6.49e-09!60;CL:0000211!6.49e-09!60;CL:0002334!1.93e-08!12;CL:0000003!1.13e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.08e-13;23!CL:0002334;2.32e-12;12!CL:0000134;1.58e-10;55!CL:0000057;7.70e-10;73!CL:0000723;8.51e-09;61!CL:0002494;1.59e-08;16!CL:0002320;5.16e-08;188!CL:0000048;1.36e-07;58!CL:0000034;2.90e-07;69!CL:0000349;5.96e-07;19!CL:0002548;7.39e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.40e-27,76;CL:0000048,1.89e-19,427;CL:0000723,2.50e-19,433;CL:0000034,2.74e-18,441;CL:0002320,5.09e-14,361;CL:0002620,9.08e-14,23;CL:0002334,1.80e-12,12;CL:0000134,3.40e-12,354;CL:0000219,6.02e-10,386;CL:0002494,1.30e-08,16;CL:0000680,8.42e-08,58;CL:0000056,8.42e-08,58;CL:0000355,8.42e-08,58;CL:0002548,5.76e-07,6;CL:0000349,6.31e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.96e-12!83;UBERON:0002329!1.96e-12!83;UBERON:0003077!1.96e-12!83;UBERON:0003059!1.96e-12!83;UBERON:0007282!1.96e-12!83;UBERON:0009618!1.96e-12!83;UBERON:0007285!1.96e-12!83;UBERON:0004290!1.32e-11!70;UBERON:0000486!6.90e-11!82;UBERON:0001134!2.55e-10!61;UBERON:0002036!2.55e-10!61;UBERON:0003082!2.55e-10!61;UBERON:0002385!4.04e-10!63;UBERON:0001015!4.04e-10!63;UBERON:0000383!4.04e-10!63;UBERON:0004872!9.73e-10!84;UBERON:0004535!1.68e-08!110;UBERON:0002199!1.88e-08!45;UBERON:0002416!1.88e-08!45;UBERON:0002049!2.56e-08!79;UBERON:0007798!2.56e-08!79;UBERON:0005256!2.66e-08!143;UBERON:0001009!8.36e-08!113;UBERON:0001637!1.10e-07!42;UBERON:0003509!1.10e-07!42;UBERON:0004572!1.10e-07!42;UBERON:0003102!1.24e-07!95;UBERON:0004923!3.85e-07!57;UBERON:0002097!4.09e-07!40;UBERON:0003914!6.77e-07!118;UBERON:0000948!7.28e-07!24;UBERON:0005498!7.28e-07!24;UBERON:0004140!7.28e-07!24;UBERON:0009881!7.28e-07!24;UBERON:0004141!7.28e-07!24;UBERON:0003084!7.28e-07!24;UBERON:0007005!7.28e-07!24;UBERON:0004139!7.28e-07!24;UBERON:0004291!7.28e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.38e-09;9!UBERON:0000042;9.38e-09;9!UBERON:0002199;1.22e-08;46!UBERON:0002416;1.22e-08;46!UBERON:0002384;1.93e-08;198!UBERON:0003688;4.46e-08;6!UBERON:0002358;4.46e-08;6!UBERON:0003684;4.46e-08;6!UBERON:0001178;4.46e-08;6!UBERON:0002097;6.95e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.80e-14,371;UBERON:0002199,4.65e-12,46;UBERON:0002416,4.65e-12,46;UBERON:0002097,1.31e-10,41;UBERON:0003688,3.61e-08,6;UBERON:0002358,3.61e-08,6;UBERON:0003684,3.61e-08,6;UBERON:0001178,3.61e-08,6;UBERON:0007524,4.19e-08,73;UBERON:0002329,7.38e-08,71;UBERON:0003059,7.38e-08,71;UBERON:0007282,7.38e-08,71;UBERON:0004290,7.38e-08,71;UBERON:0009618,7.38e-08,71;UBERON:0003077,1.23e-07,72;UBERON:0007285,1.23e-07,72;UBERON:0007503,5.95e-07,78;UBERON:0000948,6.72e-07,24;UBERON:0005498,6.72e-07,24;UBERON:0004140,6.72e-07,24;UBERON:0009881,6.72e-07,24;UBERON:0004141,6.72e-07,24;UBERON:0003084,6.72e-07,24;UBERON:0007005,6.72e-07,24;UBERON:0004139,6.72e-07,24;UBERON:0004291,6.72e-07,24;UBERON:0001134,7.56e-07,62;UBERON:0002036,7.56e-07,62;UBERON:0003082,7.56e-07,62;UBERON:0000486,7.73e-07,83 | |||
|phase1_expression=3.81524596468169,5.78071414505655,3.94672331468719,6.00439790118782,3.5756887554183,7.85104671690332,2.53299878168311,0.631719873426831,0,0,0,0.873765488520689,1.31883489114227,0.866364470720326,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,2.43966399395253,0.369363174230364,0.204000691244253,0.626909442956176,0,0,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,3.35350429851818,4.73091478821062,2.89151321907653,0.50133791063589,2.75208386025565,1.5905718941022,38.9307896242109,0.0945348171640679,1.33037638477538,0.614843499851882,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,1.25849830862972,1.10047216776027,0.208994966536811,0.258416759169329,0.71153252537342,1.00416183829401,0,0,0.732186172644509,0.367663080345869,1.62028389576352,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,3.47880366186723,3.92554586160197,11.6520079115633,11.1866282092037,2.12801029319014,2.24271040056923,3.20246987189115,11.5933747756065,1.55605517699883,2.82892411346345,2.61539044981534,3.32986340818849,2.88087962239999,0.234321431833797,6.55536161343673,0,4.93180645820944,1.40921398372518,0.971237666208789,0.561803226808994,1.02077085627447,0.491337269247072,0.206651562351531,0,1.97813543422845,1.82032272387605,0.718618141816238,0.841680569770331,0.750711119231785,0,0.438977620880838,0.919463387397059,0.600952235626387,3.17610112848059,5.02290979928813,2.56268866582281,5.93409323246773,4.80145753735044,1.23663035086127,6.69865404118636,2.60563598864226,8.27004027982204,5.06672426838233,10.3497847440087,3.40584624976508,3.07127507955743,7.81021103536552,1.41052937518696,1.69560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,6.43240938192885,0,8.8229906326076,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.491953754172454,1.3725424823882,3.51200913307602,0,0,0.277765335475589,0,0,2.88662684050547,0,2.11335649624479,0,0,0.190254152234598,0,0,0,0,0,0,0.839910640994298,0,5.28395283946805,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.822619941626588,0,0,0.112131084345361,0,3.15354629030085,1.16344544182,10.7296933755565,4.22651376278,0.26593811658487,2.08014873822732,2.05765899409714,0,1.3321108950805,2.00169191121407,3.25572963234866,0.823240336780769,0.977208552881205,0,0.791951872933429,1.20575750823834,0.871533458600294,0.199945982364114,0,0,2.10833939483032,8.62649479769697,5.7430967917057,0,2.02693829334611,3.08214483825575,2.50685348535854,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.57652132610194,7.50255781589516,1.89885516589815,7.69492187663986,18.1997568573105,5.99269177128952,3.27995961979597,0.300946099727719,0,5.17365356462525,8.63493278096067,1.47495334833363,1.91143951829782,2.54541504701563,2.40200396667599,0,0,0,0,6.65741758041988,2.41912234663744,7.69134204238208,13.9650395692137,10.1037633995906,3.97231362692673,4.09365799253363,8.36440389946759,0,6.16838775210622,6.5697838365857,3.77784917663522,1.55776328755086,4.76462551685833,0.362578348774867,4.0101294060657,0,0.34444334449382,0.546273504020151,1.18011973463482,0,0.462092022626489,0,0,1.16106791782163,0,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,3.77015801339276,2.00263202249038,1.84204409671355,0.964856007391714,5.04875150880886,3.0453505721988,1.36362603865761,3.20515328328254,2.64455864577565,0.960950336825531,0.638063562472921,0.50578890427775,0.464845549297286,14.7961803010401,0,0,1.06461206063404,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,2.21465597303108,0.762520775695299,0.255897791311334,1.71175595213568,0.318203247925937,0,0.359744915166629,0,0.471249609382746,0.202182481573316,1.58510321173008,0.421258456238981,0,0.243713489631284,0,0.682499557039929,1.41405431953713,5.65040583101214,0,4.64407282668854,0.876901770507525,1.15755106853338,0,0,0.6196469961995,0.281695602532241,3.01163839628508,4.42120684559045,0.35667105148125,0,2.32218398827431,7.24448764511784,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0,1.53580351049616,0,0,8.01422676164922,0,0,0.597743964753209,0,0,0,0,8.3980688668688,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.120596438625408,0,0,0,0,0,0,0,1.13942055847001,0,0,0,17.5450637852556,0.915975934018623,72.4927295385343,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.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|short_description=p@chr2:216249575..216249598,+ | |short_description=p@chr2:216249575..216249598,+ | ||
}} | }} |
Latest revision as of 06:04, 29 July 2015
Short description: | p@chr2:216249575..216249598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216249575..216249598, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.40e-27 | 76 |
multi fate stem cell | 1.89e-19 | 427 |
somatic stem cell | 2.50e-19 | 433 |
stem cell | 2.74e-18 | 441 |
connective tissue cell | 5.09e-14 | 361 |
skin fibroblast | 9.08e-14 | 23 |
preadipocyte | 1.80e-12 | 12 |
mesenchymal cell | 3.40e-12 | 354 |
motile cell | 6.02e-10 | 386 |
cardiocyte | 1.30e-08 | 16 |
muscle precursor cell | 8.42e-08 | 58 |
myoblast | 8.42e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.42e-08 | 58 |
cardiac fibroblast | 5.76e-07 | 6 |
extraembryonic cell | 6.31e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.80e-14 | 371 |
integument | 4.65e-12 | 46 |
integumental system | 4.65e-12 | 46 |
skin of body | 1.31e-10 | 41 |
omentum | 3.61e-08 | 6 |
peritoneum | 3.61e-08 | 6 |
abdominal cavity | 3.61e-08 | 6 |
visceral peritoneum | 3.61e-08 | 6 |
dense mesenchyme tissue | 4.19e-08 | 73 |
somite | 7.38e-08 | 71 |
presomitic mesoderm | 7.38e-08 | 71 |
presumptive segmental plate | 7.38e-08 | 71 |
dermomyotome | 7.38e-08 | 71 |
trunk paraxial mesoderm | 7.38e-08 | 71 |
paraxial mesoderm | 1.23e-07 | 72 |
presumptive paraxial mesoderm | 1.23e-07 | 72 |
epithelial vesicle | 5.95e-07 | 78 |
heart | 6.72e-07 | 24 |
primitive heart tube | 6.72e-07 | 24 |
primary heart field | 6.72e-07 | 24 |
anterior lateral plate mesoderm | 6.72e-07 | 24 |
heart tube | 6.72e-07 | 24 |
heart primordium | 6.72e-07 | 24 |
cardiac mesoderm | 6.72e-07 | 24 |
cardiogenic plate | 6.72e-07 | 24 |
heart rudiment | 6.72e-07 | 24 |
skeletal muscle tissue | 7.56e-07 | 62 |
striated muscle tissue | 7.56e-07 | 62 |
myotome | 7.56e-07 | 62 |
multilaminar epithelium | 7.73e-07 | 83 |