FFCP PHASE1:Hg19::chr3:30936292..30936306,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339896 | |EntrezGene=339896 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27949 | |HGNC=27949 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZQY3 | |UniProt=Q6ZQY3 | ||
|association_with_transcript=-35bp_to_ENST00000282538_5end | |association_with_transcript=-35bp_to_ENST00000282538_5end | ||
|cluster_id=chr3:30936292..30936306,- | |||
|description=CAGE_peak_1_at_GADL1_5end | |description=CAGE_peak_1_at_GADL1_5end | ||
|id=chr3:30936292..30936306,- | |id=chr3:30936292..30936306,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002598;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.08e-14;1!UBERON:0005425;1.33e-13;1!UBERON:0006965;1.93e-07;2 | |||
|ontology_enrichment_disease=DOID:171!2.49e-07!10 | |ontology_enrichment_disease=DOID:171!2.49e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;6.03e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.03e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-22!115;UBERON:0000341!4.45e-07!2;UBERON:0001630!4.99e-07!2;UBERON:0005090!4.99e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;4.53e-14;1!UBERON:0003831;4.53e-14;1!UBERON:0003898;4.53e-14;1!UBERON:0004830;4.53e-14;1!UBERON:0003830;4.53e-14;1!UBERON:0005175;4.53e-14;1!UBERON:0001774;4.53e-14;1!UBERON:0001103;4.53e-14;1!UBERON:0000989;7.08e-14;1!UBERON:0008811;7.08e-14;1!UBERON:0000941;1.33e-13;1!UBERON:0001785;1.33e-13;1!UBERON:0002464;1.33e-13;1!UBERON:0004904;1.33e-13;1!UBERON:0001021;1.33e-13;1!UBERON:0002346;1.62e-13;4!UBERON:0000923;1.62e-13;4!UBERON:0010316;1.62e-13;4!UBERON:0005291;1.62e-13;4!UBERON:0002050;5.29e-11;5!UBERON:0005423;5.29e-11;5!UBERON:0000922;3.80e-09;49!UBERON:0005090;1.12e-07;2!UBERON:0001630;1.12e-07;2!UBERON:0000341;1.27e-07;2!UBERON:0001134;1.32e-07;16!UBERON:0002036;1.32e-07;16!UBERON:0003127;1.93e-07;2!UBERON:0002360;1.93e-07;2!UBERON:0003714;1.93e-07;2!UBERON:0005162;1.93e-07;2!UBERON:0000122;1.93e-07;2!UBERON:0000094;1.93e-07;2!UBERON:0010743;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,4.53e-14,1;UBERON:0003831,4.53e-14,1;UBERON:0003898,4.53e-14,1;UBERON:0004830,4.53e-14,1;UBERON:0003830,4.53e-14,1;UBERON:0005175,4.53e-14,1;UBERON:0001774,4.53e-14,1;UBERON:0001103,4.53e-14,1;UBERON:0010084,4.53e-14,1;UBERON:0000989,6.65e-14,1;UBERON:0008811,6.65e-14,1;UBERON:0006258,6.65e-14,1;UBERON:0005876,6.65e-14,1;UBERON:0004874,6.65e-14,1;UBERON:0000941,1.42e-13,1;UBERON:0001785,1.42e-13,1;UBERON:0002464,1.42e-13,1;UBERON:0004904,1.42e-13,1;UBERON:0001021,1.42e-13,1;UBERON:0003902,1.42e-13,1;UBERON:0005425,1.42e-13,1;UBERON:0005090,1.12e-07,2;UBERON:0001630,1.12e-07,2;UBERON:0000341,1.28e-07,2;UBERON:0002360,1.54e-07,2;UBERON:0000094,1.54e-07,2;UBERON:0010743,1.54e-07,2;UBERON:0003127,1.87e-07,2;UBERON:0003714,1.99e-07,2;UBERON:0005162,1.99e-07,2;UBERON:0000122,1.99e-07,2 | |||
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| ||
|short_description=p1@GADL1 | |short_description=p1@GADL1 | ||
}} | }} |
Latest revision as of 22:23, 17 September 2015
Short description: | p1@GADL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GADL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000282538_5end |
EntrezGene: | GADL1 |
HGNC: | 27949 |
UniProt: | Q6ZQY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 4.53e-14 | 1 |
respiratory system muscle | 4.53e-14 | 1 |
skeletal muscle of trunk | 4.53e-14 | 1 |
respiratory system skeletal muscle | 4.53e-14 | 1 |
thoracic segment muscle | 4.53e-14 | 1 |
chest organ | 4.53e-14 | 1 |
muscle of trunk | 4.53e-14 | 1 |
diaphragm | 4.53e-14 | 1 |
future diaphragm | 4.53e-14 | 1 |
penis | 6.65e-14 | 1 |
intromittent organ | 6.65e-14 | 1 |
lateral plate mesenchyme | 6.65e-14 | 1 |
undifferentiated genital tubercle | 6.65e-14 | 1 |
somatopleure | 6.65e-14 | 1 |
cranial nerve II | 1.42e-13 | 1 |
cranial nerve | 1.42e-13 | 1 |
nerve trunk | 1.42e-13 | 1 |
nerve connecting eye with brain | 1.42e-13 | 1 |
nerve | 1.42e-13 | 1 |
retinal neural layer | 1.42e-13 | 1 |
presumptive neural retina | 1.42e-13 | 1 |
muscle structure | 1.12e-07 | 2 |
muscle organ | 1.12e-07 | 2 |
throat | 1.28e-07 | 2 |
meninx | 1.54e-07 | 2 |
membrane organ | 1.54e-07 | 2 |
meningeal cluster | 1.54e-07 | 2 |
open tracheal system trachea | 1.87e-07 | 2 |
neural tissue | 1.99e-07 | 2 |
multi cell component structure | 1.99e-07 | 2 |
neuron projection bundle | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.03e-12 | 10 |