FFCP PHASE1:Hg19::chr4:3486678..3486700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285489 | |EntrezGene=285489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26594 | |HGNC=26594 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-375bp_to_ENST00000513995_5end | |association_with_transcript=-375bp_to_ENST00000513995_5end | ||
|cluster_id=chr4:3486678..3486700,+ | |||
|description=CAGE_peak_2_at_DOK7_5end | |description=CAGE_peak_2_at_DOK7_5end | ||
|id=chr4:3486678..3486700,+ | |id=chr4:3486678..3486700,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.22e-37!254;CL:0002076!2.92e-28!43;CL:0000223!9.27e-20!59;CL:0002368!4.89e-16!13;CL:0002251!2.06e-13!21;CL:0000082!2.53e-10!19;CL:0002202!6.22e-10!9;CL:0002632!6.22e-10!9;CL:0002327!6.39e-08!4;CL:0000068!5.73e-07!3;CL:0000069!5.73e-07!3;CL:0000307!5.73e-07!3;CL:0000377!5.73e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.22e-37!254;CL:0002076!2.92e-28!43;CL:0000223!9.27e-20!59;CL:0002368!4.89e-16!13;CL:0002251!2.06e-13!21;CL:0000082!2.53e-10!19;CL:0002202!6.22e-10!9;CL:0002632!6.22e-10!9;CL:0002327!6.39e-08!4;CL:0000068!5.73e-07!3;CL:0000069!5.73e-07!3;CL:0000307!5.73e-07!3;CL:0000377!5.73e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.85e-18;3!CL:0002076;4.63e-16;42!CL:0002368;1.57e-15;13!CL:0002327;1.14e-13;4!CL:0002202;1.26e-10;9!CL:0002632;1.26e-10;9!CL:0002251;9.32e-10;20!CL:0000313;1.45e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.74e-24,42;CL:0000223,2.74e-19,58;CL:0000068,2.22e-18,3;CL:0000069,2.22e-18,3;CL:0000307,2.22e-18,3;CL:0000377,2.22e-18,3;CL:0000066,4.12e-16,253;CL:0002368,1.33e-15,13;CL:0002327,6.39e-14,4;CL:0002202,1.28e-10,9;CL:0002632,1.28e-10,9;CL:0002251,9.06e-10,20;CL:0000313,1.46e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;1.85e-18;3!CL:0000223;2.71e-11;58!UBERON:0005754;5.60e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.34e-34!106;DOID:0050687!1.40e-23!143;DOID:162!6.84e-14!235;DOID:14566!3.01e-13!239;DOID:1749!3.05e-11!14;DOID:299!7.14e-11!25;DOID:0050615!1.28e-08!16;DOID:5093!1.53e-07!4;DOID:1612!1.53e-07!4;DOID:1324!2.53e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.11e-14;14!DOID:2152;1.45e-07;1!DOID:0060060;5.60e-07;1!DOID:0050619;5.60e-07;1!DOID:0060061;5.60e-07;1!DOID:1357;5.60e-07;1!DOID:8691;5.60e-07;1!DOID:5093;9.46e-07;4!DOID:1612;9.46e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.23e-14,14;DOID:305,4.83e-12,106;DOID:0050687,3.66e-09,143;DOID:2152,1.46e-07,1;DOID:0050619,3.60e-07,1;DOID:1357,3.60e-07,1;DOID:5093,7.75e-07,4;DOID:1612,7.75e-07,4;DOID:0060060,8.18e-07,1;DOID:0060061,8.18e-07,1;DOID:8691,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.22e-29!72;UBERON:0000065!4.29e-25!53;UBERON:0008947!4.00e-22!38;UBERON:0003258!4.00e-22!38;UBERON:0000072!5.62e-22!46;UBERON:0004119!6.48e-22!169;UBERON:0000925!6.48e-22!169;UBERON:0006595!6.48e-22!169;UBERON:0001007!8.99e-18!155;UBERON:0001555!8.99e-18!155;UBERON:0007026!8.99e-18!155;UBERON:0001041!8.01e-16!98;UBERON:0000077!8.32e-16!130;UBERON:0004921!5.49e-15!129;UBERON:0004185!5.49e-15!129;UBERON:0001737!1.40e-14!9;UBERON:0000464!4.66e-14!104;UBERON:0000466!4.37e-12!126;UBERON:0005153!5.75e-12!37;UBERON:0001557!1.46e-10!19;UBERON:0005178!2.06e-10!34;UBERON:0002224!2.06e-10!34;UBERON:0004802!2.53e-10!19;UBERON:0000115!2.53e-10!19;UBERON:0000915!3.76e-10!52;UBERON:0000344!5.05e-10!12;UBERON:0005181!5.50e-10!35;UBERON:0003104!6.36e-10!238;UBERON:0009142!6.36e-10!238;UBERON:0003729!5.09e-09!5;UBERON:0004807!1.47e-08!28;UBERON:0002048!1.61e-08!22;UBERON:0000117!1.61e-08!22;UBERON:0000171!1.61e-08!22;UBERON:0000170!1.61e-08!22;UBERON:0005597!1.61e-08!22;UBERON:0000118!1.61e-08!22;UBERON:0009569!1.72e-08!113;UBERON:0000161!2.00e-08!35;UBERON:0005911!2.76e-08!82;UBERON:0005157!3.21e-08!51;UBERON:0005177!6.15e-08!107;UBERON:0001911!6.39e-08!4;UBERON:0005333!6.39e-08!4;UBERON:0008425!6.39e-08!4;UBERON:0005311!6.39e-08!4;UBERON:0002294!8.51e-08!7;UBERON:0001173!8.51e-08!7;UBERON:0004912!8.51e-08!7;UBERON:0000166!1.22e-07!21;UBERON:0003343!1.31e-07!4;UBERON:0004785!1.31e-07!4;UBERON:0007196!1.79e-07!14;UBERON:0001558!1.79e-07!14;UBERON:0001048!2.28e-07!168 | |ontology_enrichment_uberon=UBERON:0001004!1.22e-29!72;UBERON:0000065!4.29e-25!53;UBERON:0008947!4.00e-22!38;UBERON:0003258!4.00e-22!38;UBERON:0000072!5.62e-22!46;UBERON:0004119!6.48e-22!169;UBERON:0000925!6.48e-22!169;UBERON:0006595!6.48e-22!169;UBERON:0001007!8.99e-18!155;UBERON:0001555!8.99e-18!155;UBERON:0007026!8.99e-18!155;UBERON:0001041!8.01e-16!98;UBERON:0000077!8.32e-16!130;UBERON:0004921!5.49e-15!129;UBERON:0004185!5.49e-15!129;UBERON:0001737!1.40e-14!9;UBERON:0000464!4.66e-14!104;UBERON:0000466!4.37e-12!126;UBERON:0005153!5.75e-12!37;UBERON:0001557!1.46e-10!19;UBERON:0005178!2.06e-10!34;UBERON:0002224!2.06e-10!34;UBERON:0004802!2.53e-10!19;UBERON:0000115!2.53e-10!19;UBERON:0000915!3.76e-10!52;UBERON:0000344!5.05e-10!12;UBERON:0005181!5.50e-10!35;UBERON:0003104!6.36e-10!238;UBERON:0009142!6.36e-10!238;UBERON:0003729!5.09e-09!5;UBERON:0004807!1.47e-08!28;UBERON:0002048!1.61e-08!22;UBERON:0000117!1.61e-08!22;UBERON:0000171!1.61e-08!22;UBERON:0000170!1.61e-08!22;UBERON:0005597!1.61e-08!22;UBERON:0000118!1.61e-08!22;UBERON:0009569!1.72e-08!113;UBERON:0000161!2.00e-08!35;UBERON:0005911!2.76e-08!82;UBERON:0005157!3.21e-08!51;UBERON:0005177!6.15e-08!107;UBERON:0001911!6.39e-08!4;UBERON:0005333!6.39e-08!4;UBERON:0008425!6.39e-08!4;UBERON:0005311!6.39e-08!4;UBERON:0002294!8.51e-08!7;UBERON:0001173!8.51e-08!7;UBERON:0004912!8.51e-08!7;UBERON:0000166!1.22e-07!21;UBERON:0003343!1.31e-07!4;UBERON:0004785!1.31e-07!4;UBERON:0007196!1.79e-07!14;UBERON:0001558!1.79e-07!14;UBERON:0001048!2.28e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.14e-13;4!UBERON:0003343;2.58e-13;4!UBERON:0004785;2.58e-13;4!UBERON:0000974;4.83e-09;6!UBERON:0003126;3.46e-08;7!UBERON:0001005;3.46e-08;7!UBERON:0004911;1.45e-07;1!UBERON:0000065;2.05e-07;44!UBERON:0001004;3.72e-07;65!UBERON:0000998;5.60e-07;1!UBERON:0001389;5.60e-07;1!UBERON:0001764;5.60e-07;1!UBERON:0000026;5.60e-07;1!UBERON:0008784;5.60e-07;1!UBERON:0006058;5.60e-07;1!UBERON:0006868;5.60e-07;1!UBERON:0003663;5.60e-07;1!UBERON:0004256;5.60e-07;1!UBERON:0001825;5.60e-07;1!UBERON:0004708;5.60e-07;1!UBERON:0002101;5.60e-07;1!UBERON:0004709;5.60e-07;1!UBERON:0002529;5.60e-07;1!UBERON:0010538;5.60e-07;1!UBERON:0003661;5.60e-07;1!UBERON:0010890;5.60e-07;1!UBERON:0002471;5.60e-07;1!UBERON:0001383;5.60e-07;1!UBERON:0010758;5.60e-07;1!UBERON:0010707;5.60e-07;1!UBERON:0000978;5.60e-07;1!UBERON:0002103;5.60e-07;1!UBERON:0001665;5.60e-07;1!UBERON:0003823;5.60e-07;1!UBERON:0000154;5.60e-07;1!UBERON:0010709;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.39e-14,4;UBERON:0005333,6.39e-14,4;UBERON:0008425,6.39e-14,4;UBERON:0005311,6.39e-14,4;UBERON:0003343,4.23e-13,4;UBERON:0004785,4.23e-13,4;UBERON:0001004,3.44e-12,74;UBERON:0000065,7.70e-09,54;UBERON:0003126,3.73e-08,7;UBERON:0001005,3.73e-08,7;UBERON:0004911,1.46e-07,1;UBERON:0000076,3.47e-07,8;UBERON:0001764,3.60e-07,1;UBERON:0001825,3.60e-07,1;UBERON:0000998,4.06e-07,1;UBERON:0006868,4.06e-07,1;UBERON:0005418,6.88e-07,1;UBERON:0001389,6.88e-07,1;UBERON:0000026,6.88e-07,1;UBERON:0008784,6.88e-07,1;UBERON:0006058,6.88e-07,1;UBERON:0003663,6.88e-07,1;UBERON:0004256,6.88e-07,1;UBERON:0004708,6.88e-07,1;UBERON:0002101,6.88e-07,1;UBERON:0004709,6.88e-07,1;UBERON:0002529,6.88e-07,1;UBERON:0010538,6.88e-07,1;UBERON:0003661,6.88e-07,1;UBERON:0010890,6.88e-07,1;UBERON:0002471,6.88e-07,1;UBERON:0001383,6.88e-07,1;UBERON:0004357,6.88e-07,1;UBERON:0004347,6.88e-07,1;UBERON:0005420,6.88e-07,1;UBERON:0005732,6.88e-07,1;UBERON:0010758,6.88e-07,1;UBERON:0010707,6.88e-07,1;UBERON:0000978,6.88e-07,1;UBERON:0002103,6.88e-07,1;UBERON:0001665,6.88e-07,1;UBERON:0003823,6.88e-07,1;UBERON:0000154,6.88e-07,1;UBERON:0010709,6.88e-07,1;UBERON:0005733,6.88e-07,1;UBERON:0005730,6.88e-07,1 | |||
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| ||
|short_description=p2@DOK7 | |short_description=p2@DOK7 | ||
}} | }} |
Latest revision as of 14:25, 17 September 2015
Short description: | p2@DOK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DOK7_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_ENST00000513995_5end |
EntrezGene: | DOK7 |
HGNC: | 26594 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.74e-24 | 42 |
endodermal cell | 2.74e-19 | 58 |
duct epithelial cell | 2.22e-18 | 3 |
branched duct epithelial cell | 2.22e-18 | 3 |
tracheal epithelial cell | 2.22e-18 | 3 |
tracheoblast | 2.22e-18 | 3 |
epithelial cell | 4.12e-16 | 253 |
respiratory epithelial cell | 1.33e-15 | 13 |
mammary gland epithelial cell | 6.39e-14 | 4 |
epithelial cell of tracheobronchial tree | 1.28e-10 | 9 |
epithelial cell of lower respiratory tract | 1.28e-10 | 9 |
epithelial cell of alimentary canal | 9.06e-10 | 20 |
serous secreting cell | 1.46e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.23e-14 | 14 |
carcinoma | 4.83e-12 | 106 |
cell type cancer | 3.66e-09 | 143 |
ovary epithelial cancer | 1.46e-07 | 1 |
paranasal sinus cancer | 3.60e-07 | 1 |
maxillary sinus cancer | 3.60e-07 | 1 |
thoracic cancer | 7.75e-07 | 4 |
breast cancer | 7.75e-07 | 4 |
non-Hodgkin lymphoma | 8.18e-07 | 1 |
cutaneous T cell lymphoma | 8.18e-07 | 1 |
mycosis fungoides | 8.18e-07 | 1 |