FFCP PHASE1:Hg19::chr4:69215467..69215532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91746 | |EntrezGene=91746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30626 | |HGNC=30626 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=230bp_to_ENST00000510746_5end | |association_with_transcript=230bp_to_ENST00000510746_5end | ||
|cluster_id=chr4:69215467..69215532,- | |||
|description=CAGE_peak_2_at_YTHDC1_5end | |description=CAGE_peak_2_at_YTHDC1_5end | ||
|id=chr4:69215467..69215532,- | |id=chr4:69215467..69215532,- | ||
|ontology_enrichment_celltype=CL:0000037!3.52e-18!172;CL:0000566!3.52e-18!172;CL:0002032!3.21e-17!165;CL:0000837!3.21e-17!165;CL:0000738!2.37e-16!140;CL:0000988!1.90e-15!182;CL:0000763!1.00e-12!112;CL:0000049!1.00e-12!112;CL:0002087!2.48e-12!119;CL:0002031!6.24e-12!124;CL:0000766!5.03e-11!76;CL:0002057!7.23e-11!42;CL:0000860!8.41e-11!45;CL:0000839!6.56e-08!70;CL:0002009!8.42e-08!65;CL:0000557!9.26e-08!71;CL:0002194!1.89e-07!63;CL:0000576!1.89e-07!63;CL:0000040!1.89e-07!63;CL:0000559!1.89e-07!63 | |ontology_enrichment_celltype=CL:0000037!3.52e-18!172;CL:0000566!3.52e-18!172;CL:0002032!3.21e-17!165;CL:0000837!3.21e-17!165;CL:0000738!2.37e-16!140;CL:0000988!1.90e-15!182;CL:0000763!1.00e-12!112;CL:0000049!1.00e-12!112;CL:0002087!2.48e-12!119;CL:0002031!6.24e-12!124;CL:0000766!5.03e-11!76;CL:0002057!7.23e-11!42;CL:0000860!8.41e-11!45;CL:0000839!6.56e-08!70;CL:0002009!8.42e-08!65;CL:0000557!9.26e-08!71;CL:0002194!1.89e-07!63;CL:0000576!1.89e-07!63;CL:0000040!1.89e-07!63;CL:0000559!1.89e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.21e-12;33!CL:0002057;4.21e-12;33!CL:0000473;1.69e-08;39!CL:0000234;1.69e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.63e-17,168;CL:0002032,2.42e-16,161;CL:0000837,2.42e-16,161;CL:0000738,3.60e-16,136;CL:0000988,1.21e-15,177;CL:0000763,3.87e-12,108;CL:0000049,3.87e-12,108;CL:0002087,7.89e-12,115;CL:0000860,1.52e-11,42;CL:0002057,1.52e-11,42;CL:0002031,2.86e-11,120;CL:0000766,4.62e-11,72;CL:0000473,5.19e-10,48;CL:0000234,5.19e-10,48;CL:0000557,1.08e-07,67;CL:0002009,1.58e-07,61;CL:0000839,1.68e-07,66;CL:0002194,3.83e-07,59;CL:0000576,3.83e-07,59;CL:0000040,3.83e-07,59;CL:0000559,3.83e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;7.03e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.38e-07!57;UBERON:0005068!5.38e-07!57;UBERON:0006241!5.38e-07!57;UBERON:0007135!5.38e-07!57;UBERON:0002780!8.37e-07!41;UBERON:0001890!8.37e-07!41;UBERON:0006240!8.37e-07!41 | |ontology_enrichment_uberon=UBERON:0001049!5.38e-07!57;UBERON:0005068!5.38e-07!57;UBERON:0006241!5.38e-07!57;UBERON:0007135!5.38e-07!57;UBERON:0002780!8.37e-07!41;UBERON:0001890!8.37e-07!41;UBERON:0006240!8.37e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.07e-09,56;UBERON:0005068,9.07e-09,56;UBERON:0006241,9.07e-09,56;UBERON:0007135,9.07e-09,56;UBERON:0000073,5.33e-08,53;UBERON:0002616,5.33e-08,53;UBERON:0002780,2.14e-07,41;UBERON:0001890,2.14e-07,41;UBERON:0003080,2.14e-07,41;UBERON:0006240,2.14e-07,41 | |||
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| ||
|short_description=p2@YTHDC1 | |short_description=p2@YTHDC1 | ||
}} | }} |
Latest revision as of 07:44, 18 September 2015
Short description: | p2@YTHDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YTHDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 230bp_to_ENST00000510746_5end |
EntrezGene: | YTHDC1 |
HGNC: | 30626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.63e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.42e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-16 | 161 |
leukocyte | 3.60e-16 | 136 |
hematopoietic cell | 1.21e-15 | 177 |
myeloid cell | 3.87e-12 | 108 |
common myeloid progenitor | 3.87e-12 | 108 |
nongranular leukocyte | 7.89e-12 | 115 |
classical monocyte | 1.52e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-11 | 42 |
hematopoietic lineage restricted progenitor cell | 2.86e-11 | 120 |
myeloid leukocyte | 4.62e-11 | 72 |
defensive cell | 5.19e-10 | 48 |
phagocyte | 5.19e-10 | 48 |
granulocyte monocyte progenitor cell | 1.08e-07 | 67 |
macrophage dendritic cell progenitor | 1.58e-07 | 61 |
myeloid lineage restricted progenitor cell | 1.68e-07 | 66 |
monopoietic cell | 3.83e-07 | 59 |
monocyte | 3.83e-07 | 59 |
monoblast | 3.83e-07 | 59 |
promonocyte | 3.83e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neural tube | 9.07e-09 | 56 |
neural rod | 9.07e-09 | 56 |
future spinal cord | 9.07e-09 | 56 |
neural keel | 9.07e-09 | 56 |
regional part of nervous system | 5.33e-08 | 53 |
regional part of brain | 5.33e-08 | 53 |
regional part of forebrain | 2.14e-07 | 41 |
forebrain | 2.14e-07 | 41 |
anterior neural tube | 2.14e-07 | 41 |
future forebrain | 2.14e-07 | 41 |