FFCP PHASE1:Hg19::chr15:45694434..45694445,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:45694434..45694445,-
|short_description=p6@GATM
|description=CAGE_peak_6_at_GATM_5end
|association_with_transcript=-18bp_to_ENST00000561148_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2628 | |EntrezGene=2628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4175 | |HGNC=4175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000561148_5end | |||
|cluster_id=chr15:45694434..45694445,- | |||
|description=CAGE_peak_6_at_GATM_5end | |||
|id=chr15:45694434..45694445,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.07e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.21e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.92e-26;1!UBERON:0009117;5.69e-11;10!UBERON:0005564;5.69e-11;10!UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-16!57;UBERON:0005068!1.48e-16!57;UBERON:0006241!1.48e-16!57;UBERON:0007135!1.48e-16!57;UBERON:0007023!1.61e-16!115;UBERON:0002616!1.66e-14!59;UBERON:0002780!7.38e-13!41;UBERON:0001890!7.38e-13!41;UBERON:0006240!7.38e-13!41;UBERON:0000955!1.25e-12!69;UBERON:0006238!1.25e-12!69;UBERON:0003080!2.22e-12!42;UBERON:0003075!2.29e-11!86;UBERON:0007284!2.29e-11!86;UBERON:0001017!1.01e-10!82;UBERON:0005743!1.53e-10!86;UBERON:0002346!2.20e-10!90;UBERON:0000073!4.53e-10!94;UBERON:0001016!4.53e-10!94;UBERON:0002020!1.36e-09!34;UBERON:0003528!1.36e-09!34;UBERON:0001893!1.70e-09!34;UBERON:0002791!5.37e-09!33;UBERON:0003056!1.41e-08!61;UBERON:0000033!1.46e-08!123;UBERON:0000153!4.23e-08!129;UBERON:0007811!4.23e-08!129;UBERON:0001869!7.49e-08!32;UBERON:0002298!1.08e-07!8;UBERON:0004732!6.05e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.92e-26;1!UBERON:0001785;5.92e-26;1!UBERON:0002464;5.92e-26;1!UBERON:0004904;5.92e-26;1!UBERON:0001021;5.92e-26;1!UBERON:0003714;1.07e-13;2!UBERON:0005162;1.07e-13;2!UBERON:0000122;1.07e-13;2!UBERON:0000473;1.82e-13;8!UBERON:0003135;4.62e-10;11!UBERON:0001896;1.41e-09;3!UBERON:0005290;1.41e-09;3!UBERON:0004732;1.36e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.61e-26,1;UBERON:0001785,4.61e-26,1;UBERON:0002464,4.61e-26,1;UBERON:0004904,4.61e-26,1;UBERON:0001021,4.61e-26,1;UBERON:0003902,4.61e-26,1;UBERON:0005425,4.61e-26,1;UBERON:0003714,9.40e-14,2;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0000473,1.61e-13,8;UBERON:0003135,4.22e-10,11;UBERON:0001896,1.81e-09,3;UBERON:0005290,1.81e-09,3;UBERON:0010096,1.81e-09,3;UBERON:0004732,1.47e-08,13;UBERON:0001781,1.59e-07,4 | |||
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| ||
|short_description=p6@GATM | |||
}} | }} |
Latest revision as of 20:03, 17 September 2015
Short description: | p6@GATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GATM_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000561148_5end |
EntrezGene: | GATM |
HGNC: | 4175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.61e-26 | 1 |
cranial nerve | 4.61e-26 | 1 |
nerve trunk | 4.61e-26 | 1 |
nerve connecting eye with brain | 4.61e-26 | 1 |
nerve | 4.61e-26 | 1 |
retinal neural layer | 4.61e-26 | 1 |
presumptive neural retina | 4.61e-26 | 1 |
neural tissue | 9.40e-14 | 2 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
testis | 1.61e-13 | 8 |
male reproductive organ | 4.22e-10 | 11 |
medulla oblongata | 1.81e-09 | 3 |
myelencephalon | 1.81e-09 | 3 |
future myelencephalon | 1.81e-09 | 3 |
segmental subdivision of nervous system | 1.47e-08 | 13 |
layer of retina | 1.59e-07 | 4 |