FFCP PHASE1:Hg19::chr5:72921991..72922048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64283 | |EntrezGene=64283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=D6RAP0 | |UniProt=D6RAP0 | ||
|association_with_transcript=0bp_to_ENST00000509848_5end | |association_with_transcript=0bp_to_ENST00000509848_5end | ||
|cluster_id=chr5:72921991..72922048,+ | |||
|description=CAGE_peak_1_at_RGNEF_5end | |description=CAGE_peak_1_at_RGNEF_5end | ||
|id=chr5:72921991..72922048,+ | |id=chr5:72921991..72922048,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.01e-29!254;CL:0000220!2.30e-23!246;CL:0002321!1.06e-22!248;CL:0000076!4.32e-17!62;CL:0002139!3.77e-16!24;CL:0000222!1.21e-15!119;CL:0000213!3.44e-14!57;CL:0000215!3.44e-14!57;CL:0000115!5.01e-13!35;CL:0000071!2.68e-12!18;CL:0002546!2.68e-12!18;CL:0002078!1.12e-11!44;CL:0000223!6.27e-08!59;CL:1000413!8.98e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.01e-29!254;CL:0000220!2.30e-23!246;CL:0002321!1.06e-22!248;CL:0000076!4.32e-17!62;CL:0002139!3.77e-16!24;CL:0000222!1.21e-15!119;CL:0000213!3.44e-14!57;CL:0000215!3.44e-14!57;CL:0000115!5.01e-13!35;CL:0000071!2.68e-12!18;CL:0002546!2.68e-12!18;CL:0002078!1.12e-11!44;CL:0000223!6.27e-08!59;CL:1000413!8.98e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.40e-17;24!CL:0000071;8.02e-13;18!CL:0000115;2.79e-12;36!CL:0000213;5.72e-09;58!CL:0000215;5.72e-09;58!CL:0002078;6.30e-09;45!CL:0000076;2.86e-08;63!CL:1000413;5.11e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.44e-27,253;CL:0002321,1.84e-22,250;CL:0000076,7.30e-17,63;CL:0002139,8.44e-17,24;CL:0000222,1.71e-16,121;CL:0000213,1.29e-15,58;CL:0000215,1.29e-15,58;CL:0000115,1.84e-14,36;CL:0002078,3.24e-13,45;CL:0000071,8.94e-13,18;CL:0002546,8.94e-13,18;CL:0000223,8.63e-08,58;CL:1000413,5.25e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;8.02e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;8.02e-13;18!UBERON:0001986;8.02e-13;18!UBERON:0004852;8.02e-13;18!UBERON:0000487;9.03e-10;22!UBERON:0000490;4.77e-09;33!UBERON:0007500;1.40e-08;56!UBERON:0001981;1.40e-08;56!UBERON:0004537;1.40e-08;56!UBERON:0000055;1.57e-08;65!UBERON:0002049;5.22e-08;75!UBERON:0007798;5.22e-08;75!UBERON:0006914;1.16e-07;25!UBERON:0002365;4.89e-07;31!UBERON:0002330;4.89e-07;31!UBERON:0003915;5.11e-07;9!UBERON:0004700;5.11e-07;9!UBERON:0001917;5.11e-07;9!UBERON:0000165;7.31e-07;28!UBERON:0001637;8.36e-07;42!UBERON:0003509;8.36e-07;42!UBERON:0004572;8.36e-07;42 | |||
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| ||
|short_description=p1@RGNEF | |short_description=p1@RGNEF | ||
}} | }} |
Latest revision as of 16:11, 18 September 2015
Short description: | p1@RGNEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGNEF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509848_5end |
EntrezGene: | RGNEF |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.44e-27 | 253 |
embryonic cell | 1.84e-22 | 250 |
squamous epithelial cell | 7.30e-17 | 63 |
endothelial cell of vascular tree | 8.44e-17 | 24 |
mesodermal cell | 1.71e-16 | 121 |
lining cell | 1.29e-15 | 58 |
barrier cell | 1.29e-15 | 58 |
endothelial cell | 1.84e-14 | 36 |
meso-epithelial cell | 3.24e-13 | 45 |
blood vessel endothelial cell | 8.94e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.94e-13 | 18 |
endodermal cell | 8.63e-08 | 58 |
endothelial cell of artery | 5.25e-07 | 9 |