FFCP PHASE1:Hg19::chr5:77845030..77845058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |EntrezGene=10184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |HGNC=6588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000515007_5end | |association_with_transcript=-56bp_to_ENST00000515007_5end | ||
|cluster_id=chr5:77845030..77845058,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_LHFPL2_5end | |description=CAGE_peak_4_at_LHFPL2_5end | ||
|id=chr5:77845030..77845058,- | |id=chr5:77845030..77845058,- | ||
|ontology_enrichment_celltype=CL:0002194!5.01e-57!63;CL:0000576!5.01e-57!63;CL:0000040!5.01e-57!63;CL:0000559!5.01e-57!63;CL:0002009!1.20e-54!65;CL:0002057!9.31e-51!42;CL:0000766!5.96e-50!76;CL:0000839!2.69e-49!70;CL:0000557!2.56e-48!71;CL:0000860!2.81e-46!45;CL:0000763!2.99e-36!112;CL:0000049!2.99e-36!112;CL:0002087!2.66e-26!119;CL:0000738!1.77e-22!140;CL:0002031!1.77e-21!124;CL:0000037!7.07e-21!172;CL:0000566!7.07e-21!172;CL:0002032!2.08e-19!165;CL:0000837!2.08e-19!165;CL:0000988!1.62e-18!182;CL:0002393!3.94e-08!9;CL:0002397!3.94e-08!9 | |ontology_enrichment_celltype=CL:0002194!5.01e-57!63;CL:0000576!5.01e-57!63;CL:0000040!5.01e-57!63;CL:0000559!5.01e-57!63;CL:0002009!1.20e-54!65;CL:0002057!9.31e-51!42;CL:0000766!5.96e-50!76;CL:0000839!2.69e-49!70;CL:0000557!2.56e-48!71;CL:0000860!2.81e-46!45;CL:0000763!2.99e-36!112;CL:0000049!2.99e-36!112;CL:0002087!2.66e-26!119;CL:0000738!1.77e-22!140;CL:0002031!1.77e-21!124;CL:0000037!7.07e-21!172;CL:0000566!7.07e-21!172;CL:0002032!2.08e-19!165;CL:0000837!2.08e-19!165;CL:0000988!1.62e-18!182;CL:0002393!3.94e-08!9;CL:0002397!3.94e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-85;33!CL:0002057;2.00e-85;33!CL:0000473;4.24e-81;39!CL:0000234;4.24e-81;39!CL:0000576;1.60e-59;48!CL:0000766;4.96e-42;69!CL:0000763;3.04e-21;100!CL:0002087;3.09e-14;104!CL:0000235;3.42e-14;6!CL:0000738;2.11e-13;136!CL:0000767;2.30e-10;3!CL:0000988;6.14e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.53e-112,59;CL:0000576,2.53e-112,59;CL:0000040,2.53e-112,59;CL:0000559,2.53e-112,59;CL:0002009,2.32e-108,61;CL:0000766,1.97e-103,72;CL:0000473,1.26e-100,48;CL:0000234,1.26e-100,48;CL:0000839,1.72e-99,66;CL:0000557,7.12e-98,67;CL:0000860,2.83e-87,42;CL:0002057,2.83e-87,42;CL:0000763,1.10e-68,108;CL:0000049,1.10e-68,108;CL:0002087,1.22e-55,115;CL:0002031,6.72e-53,120;CL:0000738,2.01e-52,136;CL:0002032,1.14e-44,161;CL:0000837,1.14e-44,161;CL:0000037,2.33e-42,168;CL:0000988,1.18e-39,177;CL:0000134,2.61e-14,354;CL:0000235,4.11e-14,6;CL:0002320,8.12e-14,361;CL:0000219,4.43e-12,386;CL:0000767,1.38e-10,3;CL:0000048,5.84e-10,427;CL:0000723,1.14e-09,433;CL:0000034,2.73e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-64;42!CL:0000049;1.39e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-85,76;UBERON:0001474,2.77e-78,82;UBERON:0004765,1.78e-70,90;UBERON:0002405,6.87e-68,93;UBERON:0002390,6.29e-64,98;UBERON:0003061,6.29e-64,98;UBERON:0001434,1.88e-62,100;UBERON:0002193,4.29e-57,108;UBERON:0002204,2.51e-33,167;UBERON:0003081,1.40e-25,203;UBERON:0000926,1.18e-13,315;UBERON:0004120,1.18e-13,315;UBERON:0006603,1.18e-13,315;UBERON:0002384,3.82e-13,371 | |||
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| ||
|short_description=p4@LHFPL2 | |short_description=p4@LHFPL2 | ||
}} | }} |
Latest revision as of 20:37, 18 September 2015
Short description: | p4@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LHFPL2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -56bp_to_ENST00000515007_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.53e-112 | 59 |
monocyte | 2.53e-112 | 59 |
monoblast | 2.53e-112 | 59 |
promonocyte | 2.53e-112 | 59 |
macrophage dendritic cell progenitor | 2.32e-108 | 61 |
myeloid leukocyte | 1.97e-103 | 72 |
defensive cell | 1.26e-100 | 48 |
phagocyte | 1.26e-100 | 48 |
myeloid lineage restricted progenitor cell | 1.72e-99 | 66 |
granulocyte monocyte progenitor cell | 7.12e-98 | 67 |
classical monocyte | 2.83e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-87 | 42 |
myeloid cell | 1.10e-68 | 108 |
common myeloid progenitor | 1.10e-68 | 108 |
nongranular leukocyte | 1.22e-55 | 115 |
hematopoietic lineage restricted progenitor cell | 6.72e-53 | 120 |
leukocyte | 2.01e-52 | 136 |
hematopoietic oligopotent progenitor cell | 1.14e-44 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-44 | 161 |
hematopoietic stem cell | 2.33e-42 | 168 |
hematopoietic cell | 1.18e-39 | 177 |
mesenchymal cell | 2.61e-14 | 354 |
macrophage | 4.11e-14 | 6 |
connective tissue cell | 8.12e-14 | 361 |
motile cell | 4.43e-12 | 386 |
basophil | 1.38e-10 | 3 |
multi fate stem cell | 5.84e-10 | 427 |
somatic stem cell | 1.14e-09 | 433 |
stem cell | 2.73e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-85 | 76 |
bone element | 2.77e-78 | 82 |
skeletal element | 1.78e-70 | 90 |
immune system | 6.87e-68 | 93 |
hematopoietic system | 6.29e-64 | 98 |
blood island | 6.29e-64 | 98 |
skeletal system | 1.88e-62 | 100 |
hemolymphoid system | 4.29e-57 | 108 |
musculoskeletal system | 2.51e-33 | 167 |
lateral plate mesoderm | 1.40e-25 | 203 |
mesoderm | 1.18e-13 | 315 |
mesoderm-derived structure | 1.18e-13 | 315 |
presumptive mesoderm | 1.18e-13 | 315 |
connective tissue | 3.82e-13 | 371 |