FFCP PHASE1:Hg19::chr6:130687570..130687594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=-12bp_to_BC044246_5end | |association_with_transcript=-12bp_to_BC044246_5end | ||
|cluster_id=chr6:130687570..130687594,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_4_at_TMEM200A_5end | |description=CAGE_peak_4_at_TMEM200A_5end | ||
|id=chr6:130687570..130687594,+ | |id=chr6:130687570..130687594,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.66e-36!180;CL:0000680!6.46e-21!57;CL:0000056!6.46e-21!57;CL:0000355!6.46e-21!57;CL:0000187!1.96e-20!54;CL:0000359!1.30e-19!32;CL:0000192!2.62e-19!42;CL:0000514!2.62e-19!42;CL:0000183!4.77e-18!59;CL:0000393!7.98e-18!60;CL:0000211!7.98e-18!60;CL:0000057!5.00e-17!75;CL:0002334!9.02e-09!12;CL:0002620!2.82e-08!23;CL:0002539!1.52e-07!10 | |ontology_enrichment_celltype=CL:0000055!1.66e-36!180;CL:0000680!6.46e-21!57;CL:0000056!6.46e-21!57;CL:0000355!6.46e-21!57;CL:0000187!1.96e-20!54;CL:0000359!1.30e-19!32;CL:0000192!2.62e-19!42;CL:0000514!2.62e-19!42;CL:0000183!4.77e-18!59;CL:0000393!7.98e-18!60;CL:0000211!7.98e-18!60;CL:0000057!5.00e-17!75;CL:0002334!9.02e-09!12;CL:0002620!2.82e-08!23;CL:0002539!1.52e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.81e-25;32!CL:0000192;2.41e-18;43!CL:0000187;2.86e-12;55!CL:0002334;1.76e-11;12!CL:0000393;4.09e-10;61!CL:0000211;4.09e-10;61!CL:0002539;6.15e-10;10!CL:0002620;3.27e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.39e-26,32;CL:0000192,3.34e-24,43;CL:0000514,3.34e-24,43;CL:0000680,3.20e-23,58;CL:0000056,3.20e-23,58;CL:0000355,3.20e-23,58;CL:0000187,3.98e-23,55;CL:0000393,3.01e-19,61;CL:0000211,3.01e-19,61;CL:0000057,3.70e-15,76;CL:0000723,1.27e-12,433;CL:0000048,1.40e-12,427;CL:0000034,5.49e-12,441;CL:0002334,1.50e-11,12;CL:0002539,7.45e-10,10;CL:0002620,4.01e-09,23;CL:0000222,1.72e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.41e-18;43!CL:0000355;5.33e-12;58 | |||
|ontology_enrichment_disease=DOID:2394!9.12e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.86e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.13e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.20e-20!83;UBERON:0002329!1.20e-20!83;UBERON:0003077!1.20e-20!83;UBERON:0003059!1.20e-20!83;UBERON:0007282!1.20e-20!83;UBERON:0009618!1.20e-20!83;UBERON:0007285!1.20e-20!83;UBERON:0002385!7.56e-19!63;UBERON:0001015!7.56e-19!63;UBERON:0000383!7.56e-19!63;UBERON:0001134!9.95e-19!61;UBERON:0002036!9.95e-19!61;UBERON:0003082!9.95e-19!61;UBERON:0004290!4.33e-18!70;UBERON:0000486!8.72e-16!82;UBERON:0000475!3.44e-13!365;UBERON:0005256!1.37e-11!143;UBERON:0001637!1.56e-11!42;UBERON:0003509!1.56e-11!42;UBERON:0004572!1.56e-11!42;UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0002100!1.50e-08!216;UBERON:0002049!2.24e-08!79;UBERON:0007798!2.24e-08!79;UBERON:0002199!1.38e-07!45;UBERON:0002416!1.38e-07!45;UBERON:0004237!1.52e-07!10;UBERON:0004695!1.52e-07!10;UBERON:0002111!1.52e-07!10;UBERON:0004178!1.52e-07!10;UBERON:0001135!1.54e-07!15;UBERON:0001981!2.36e-07!60;UBERON:0007500!2.36e-07!60;UBERON:0004537!2.36e-07!60;UBERON:0006965!2.36e-07!60;UBERON:0003102!2.72e-07!95;UBERON:0000481!3.65e-07!347;UBERON:0004872!5.78e-07!84;UBERON:0000490!8.35e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!1.20e-20!83;UBERON:0002329!1.20e-20!83;UBERON:0003077!1.20e-20!83;UBERON:0003059!1.20e-20!83;UBERON:0007282!1.20e-20!83;UBERON:0009618!1.20e-20!83;UBERON:0007285!1.20e-20!83;UBERON:0002385!7.56e-19!63;UBERON:0001015!7.56e-19!63;UBERON:0000383!7.56e-19!63;UBERON:0001134!9.95e-19!61;UBERON:0002036!9.95e-19!61;UBERON:0003082!9.95e-19!61;UBERON:0004290!4.33e-18!70;UBERON:0000486!8.72e-16!82;UBERON:0000475!3.44e-13!365;UBERON:0005256!1.37e-11!143;UBERON:0001637!1.56e-11!42;UBERON:0003509!1.56e-11!42;UBERON:0004572!1.56e-11!42;UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0002100!1.50e-08!216;UBERON:0002049!2.24e-08!79;UBERON:0007798!2.24e-08!79;UBERON:0002199!1.38e-07!45;UBERON:0002416!1.38e-07!45;UBERON:0004237!1.52e-07!10;UBERON:0004695!1.52e-07!10;UBERON:0002111!1.52e-07!10;UBERON:0004178!1.52e-07!10;UBERON:0001135!1.54e-07!15;UBERON:0001981!2.36e-07!60;UBERON:0007500!2.36e-07!60;UBERON:0004537!2.36e-07!60;UBERON:0006965!2.36e-07!60;UBERON:0003102!2.72e-07!95;UBERON:0000481!3.65e-07!347;UBERON:0004872!5.78e-07!84;UBERON:0000490!8.35e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.88e-14;33!UBERON:0004571;1.88e-14;33!UBERON:0001637;1.83e-11;42!UBERON:0003509;1.83e-11;42!UBERON:0004572;1.83e-11;42!UBERON:0004237;6.15e-10;10!UBERON:0004695;6.15e-10;10!UBERON:0002111;6.15e-10;10!UBERON:0004178;6.15e-10;10!UBERON:0000947;1.25e-07;21!UBERON:0010191;1.25e-07;21!UBERON:0007500;2.97e-07;56!UBERON:0001981;2.97e-07;56!UBERON:0004537;2.97e-07;56 | |||
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| ||
|short_description=p4@TMEM200A | |short_description=p4@TMEM200A | ||
}} | }} |
Latest revision as of 17:37, 24 September 2015
Short description: | p4@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | -12bp_to_BC044246_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.39e-26 | 32 |
smooth muscle cell | 3.34e-24 | 43 |
smooth muscle myoblast | 3.34e-24 | 43 |
muscle precursor cell | 3.20e-23 | 58 |
myoblast | 3.20e-23 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-23 | 58 |
muscle cell | 3.98e-23 | 55 |
electrically responsive cell | 3.01e-19 | 61 |
electrically active cell | 3.01e-19 | 61 |
fibroblast | 3.70e-15 | 76 |
somatic stem cell | 1.27e-12 | 433 |
multi fate stem cell | 1.40e-12 | 427 |
stem cell | 5.49e-12 | 441 |
preadipocyte | 1.50e-11 | 12 |
aortic smooth muscle cell | 7.45e-10 | 10 |
skin fibroblast | 4.01e-09 | 23 |
mesodermal cell | 1.72e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.13e-09 | 14 |